Commit graph

1443 commits

Author SHA1 Message Date
Joey Hess
5e1221ad53
Improve shape of commit tree when importing from unversioned special remotes
Make the import have the previous import as a parent, so eg `git log --stat`
displays a useful diff.

Also a minor optimisation, only calculate the depth of the imported history
once.
2019-05-21 11:32:54 -04:00
Joey Hess
97fd9da6e7
add back non-preferred files to imported tree
Prevents merging the import from deleting the non-preferred files from
the branch it's merged into.

adjustTree previously appended the new list of items to the old, which
could result in it generating a tree with multiple files with the same
name. That is not good and confuses some parts of git. Gave it a
function to resolve such conflicts.

That allowed dealing with the problem of what happens when the import
contains some files (or subtrees) with the same name as files that were
filtered out of the export. The files from the import win.
2019-05-20 16:43:52 -04:00
Joey Hess
568af1073e
filter exported tree through remote's preferred content setting
The filtering is fairly efficient as far as building the trees goes,
since it reuses adjustTree. But it still needs to traverse the whole
tree, and look up the keys used by every file.

The tree that gets recorded to export.log is the filtered tree.
This way resumes of interrupted sync to an export uses it without
needing to recalculate it. And, a change to the preferred content
settings of the remote will result in a different tree, so the export
will be updated accordingly.

The original tree is still used in the remote tracking branch.
That branch represents the special remote as a git remote, and if it
were a normal git remote, the tree in its head would not be affected by
preferred content.
2019-05-20 11:54:55 -04:00
Joey Hess
354c0eb57f
support standard and groupwanted in keyless mode
Only when the preferred content expression includes them will a parse
failure due to them needing keys result in the preferred content
expression not parsing in keyless mode.
2019-05-14 14:59:03 -04:00
Joey Hess
9411a7c93c
matching preferred content before key is known
This will let import try to match preferred content expressions before
downloading the content and generating its key.

If an expression needs a key, it preferredContentParser with
preferredContentKeylessTokens will fail to parse it.

standard and groupwanted are not in preferredContentKeylessTokens
because they may refer to an expression that refers to a key.
That needs further work to support them.
2019-05-14 14:28:23 -04:00
Joey Hess
aa7710982b
avoid list lookup by parseToken
Minor optimisation to parsing of a preferred content expression.
2019-05-14 13:11:29 -04:00
Joey Hess
c1957b6aeb
whitespace 2019-05-14 13:01:50 -04:00
Joey Hess
5cc0ee70c0
factor out MatchFiles Annex
This makes parseToken more general
2019-05-14 12:44:50 -04:00
Joey Hess
82186ca58f
annex.jobs=cpus etc
Added the ability to run one job per CPU (core), by setting annex.jobs=cpus,
or using option --jobs=cpus or -Jcpus.

Built with future expansion in mind, including not defaulting matching on
Concurrency so more constructors can later be added, and using "cpu"
instead of "0".
2019-05-10 13:27:08 -04:00
Joey Hess
2d33122215
avoid ingest lockdown file escaping the withOtherTmp call
Fixes bug that caused git-annex to fail to add a file when another
git-annex process cleaned up the temp directory it was using.

Solution is just to push withOtherTmp out to a higher level, so that
the whole ingest process can be completed inside it.

But in the assistant, that was not practical to do, since withOtherTmp runs
in the Annex monad and the assistant does not. Worked around by introducing
a separate temp directory that only the assistant uses for lockdown.
Since only one assistant can run at a time, it's easy to clean up that
directory of old cruft at startup.
2019-05-07 13:04:57 -04:00
Joey Hess
2a41712ef1
avoid stageJournal escaping withOtherTmp
This is only done for correctness sake; I don't see any way that it
would have caused a problem here. The jlog file escaped withOtherTmp
so another process could swoop in and delete it, but the file is only
used as a buffer for a list of filenames, and its handle gets rewound
and they're read back out, which will still work even if it's already
been deleted.

The only reason I didn't just pre-delete the file and keep the handle
open is I'm not sure that works on all OS's (eg Windows). If there was
a problem that this fixed it might involve an OS that doesn't support
deleting an open file or something like that.
2019-05-07 11:57:12 -04:00
Joey Hess
b03e65d260
Improved locking when multiple git-annex processes are writing to the .git/index file 2019-05-06 15:15:12 -04:00
Joey Hess
c5e0f9b3a5
fix setting imported tree
bf7ecd6892 went too far and broke
importing, the old tree was used on the remote tracking branch and not
the newly imported tree.

Test suite noticed the problem luckily.
2019-05-06 14:38:02 -04:00
Joey Hess
bf7ecd6892
fix export subtree reversion
Fix reversion in last release that caused wrong tree to be written to
remote tracking branch after an export of a subtree.

The invariant "commitsha should have the treesha as its tree"
was not met due to a bug. Guarantee it's met by catting the commitsha
to find its actual tree. A little bit slower, but this is not run often.
2019-05-06 13:57:13 -04:00
Joey Hess
96dfba7b53
fix build w/o MagicMime more 2019-05-03 11:30:20 -04:00
Joey Hess
740c9f7da8
fix build w/o MagicMime 2019-05-03 11:20:25 -04:00
Joey Hess
ab36f2f535
fix windows build 2019-05-03 10:58:34 -04:00
Joey Hess
ec697721e4
simplify
and a bit faster using Eq this way
2019-05-01 15:34:07 -04:00
Joey Hess
700a3f2787
Merge branch 'master' into import-from-s3 2019-05-01 14:30:52 -04:00
Joey Hess
a32f31235a
reuse old imported commits
This avoids proliferation of different import commits for the same
trees, and makes the resulting git history nice.
2019-05-01 14:20:26 -04:00
Joey Hess
2bd0e07ed8
make merge commit on export that preserves the import history 2019-05-01 13:13:00 -04:00
Joey Hess
d1c283b691
comments 2019-05-01 12:37:54 -04:00
Joey Hess
1503b86a14
make import tree from remote generate a merge commit
This way no history is lost, neither what was exported to the remote,
or the history of changes that is imported from it. No complicated
correlation of two possibly very different histories is needed, just
record what we know and then git merge will do a good job.

Also, it notices when the remote tracking branch doesn't need to be updated,
and avoids doing anything, so noop remotes are super cheap.

The only catch here is that, since the commits generated for imports
from the remote don't have a stable date or author/committer, each
(non-noop) import generates different commits for the same imported
trees. So, when the imported remote tracking branch is merged into master
and then a change is imported again, there will be an extra series of
commits, which will get more and more expensive each time.

This seems to call for making stable commits for imports. Also that
seems a good idea to make importing in several repositories have the
same result.
2019-04-30 16:13:21 -04:00
Joey Hess
b69d11ec42
wip 2019-04-30 14:00:27 -04:00
Joey Hess
28b4310abe
typo 2019-04-30 12:22:13 -04:00
Joey Hess
9dd764e6f7
Added mimeencoding= term to annex.largefiles expressions.
* Added mimeencoding= term to annex.largefiles expressions.
  This is probably mostly useful to match non-text files with eg
  "mimeencoding=binary"
* git-annex matchexpression: Added --mimeencoding option.
2019-04-30 12:17:22 -04:00
Joey Hess
18cf21d3ed
wip 2019-04-26 10:17:02 -04:00
Joey Hess
f08cd6a4ac
set S3 version id in retrieveExportWithContentIdentifierS3
This is necessary because of checks for a S3 version id being set
done when deleting the export or overwriting or renaming it.
2019-04-24 15:13:07 -04:00
Joey Hess
2d0dd34916
initial work toward correctly merging deeper import histories
Pure code is tested working, including with even histories that merge
several lines of development. Needs to be hooked up to git histories
next.
2019-04-23 16:34:19 -04:00
Joey Hess
29705d83f4
convert History to use Set
This way the Ord instance doesn't care what order parent
Histories come in.
2019-04-23 15:08:37 -04:00
Joey Hess
833980c0bc
indicate when an old version of a file is being imported 2019-04-19 15:05:08 -04:00
Joey Hess
f95f340c73
sync: When listing contents on an import remote fails, proceed with other syncing instead of aborting
Switch listContents to being a proper CommandStart, so if it throws an
exception, it will be treated like any other command action that fails.

downloadImport apparently does not ever throw an exception,
and itself uses commandAction, so it can't be a CommandStart.
2019-04-10 17:02:56 -04:00
Joey Hess
6babb2c73f
remove wrong uniqueness constraint from ContentIdentifier db
Fix bug that caused importing from a special remote to repeatedly download
unchanged files when multiple files in the remote have the same content.

Unfortunately, there's really no good way to remove a uniqueness constraint
from a sqlite database. The best that can be done is to make a new table
and copy the data over. But that would require using persistent's
migrations or raw sql, and I don't want to do either.

Instead, a sledgehammer approach: Renamed .git/annex/cid to
.git/annex/cids. When the new database doesn't exist, it will be populated
from the git-annex branch.

Noting deletes the old database. Don't want to delete it out from under
some long-running git-annex process that might be using it. It could
eventually be deleted. But this is such a new feature, probably few repos
have the database in any case.
2019-04-09 19:58:24 -04:00
Joey Hess
37041b629d
improve messages around export/import conflicts
A conflict can be caused by either export or import when the remote
supports both.
2019-04-09 13:03:59 -04:00
Joey Hess
40ecf58d4b
update licenses from GPL to AGPL
This does not change the overall license of the git-annex program, which
was already AGPL due to a number of sources files being AGPL already.

Legally speaking, I'm adding a new license under which these files are
now available; I already released their current contents under the GPL
license. Now they're dual licensed GPL and AGPL. However, I intend
for all my future changes to these files to only be released under the
AGPL license, and I won't be tracking the dual licensing status, so I'm
simply changing the license statement to say it's AGPL.

(In some cases, others wrote parts of the code of a file and released it
under the GPL; but in all cases I have contributed a significant portion
of the code in each file and it's that code that is getting the AGPL
license; the GPL license of other contributors allows combining with
AGPL code.)
2019-03-13 15:48:14 -04:00
Joey Hess
c714a260a9
include remote name for consistency with export output 2019-03-11 14:46:37 -04:00
Joey Hess
e1fdc8b374
record only subtree in export db and log after importing a subtree 2019-03-11 13:45:01 -04:00
Joey Hess
6149a3b9bd
added progress bars
clean up old todo item I checked earlier, see commit
dec30d2b14
2019-03-08 12:43:03 -04:00
Joey Hess
e412129523
concurrency and status messages when downloading from import 2019-03-08 12:33:44 -04:00
Joey Hess
e3a704224f
fix export db locking deadlock 2019-03-07 16:06:02 -04:00
Joey Hess
4efd431136
remove obsolete TODO
updateExportDb runs addExportedLocation
2019-03-07 15:11:24 -04:00
Joey Hess
71fec9060c
move 2019-03-07 12:56:40 -04:00
Joey Hess
68d1661251
cross-repo import now working correctly 2019-03-07 12:31:35 -04:00
Joey Hess
ee251b2e2e
implement updating the ContentIdentifier db with info from the git-annex branch
untested

This won't be super slow, but it does need to diff two likely large
trees, and since the git-annex branch rarely sits still, it will most
likely be run at the beginning of every import.

A possible speed improvement would be to only run this when the database
did not contain a ContentIdentifier. But that would only speed up
imports when there is no new version of a file on the special remote,
at most renames of existing files being imported.

A better speed improvement would be to record something in the git-annex
branch that indicates when an import has been run, and only do the diff
if the git-annex branch has record of a newer import than we've seen
before. Then, it would only run when there is in fact new
ContentIdentifier information available from a remote. Certianly doable,
but didn't want to complicate things yet.
2019-03-06 18:04:30 -04:00
Joey Hess
cd3a2b023a
initial try at using storeExportWithContentIdentifier
Untested, and I'm not sure about the locking of the ContentIdentifier db.
2019-03-04 17:50:41 -04:00
Joey Hess
00722ba1f8
lock before writing to the ContentIdentifier db 2019-03-04 16:47:30 -04:00
Joey Hess
aaacf431d8
handle importtree=yes config
For now, it's only allowed when exporttree=yes is also set.
That simplified the implementation, but could later be changed if
there's a remote that makes sense to be an import but not an export.
However, it may work just as well to make a remote be readonly to
prevent export to it while still allowing import.
2019-03-04 16:07:35 -04:00
Joey Hess
3cd19fb4d0
use InodeCache to avoid races in import from directory special remote
This does not avoid all possible races, but it does avoid all likely
ones, and is demonstratably better than git's own handling of races
where files get modified at the same time as it's updating the working
tree.

The main thing this won't detect are not unlikely races where part
of a file gets changed while it's being copied and then the file is
restored to its original condition before the modification check.
No, it's more likely that the limitations of checking inode, size,
and mtime won't detect certian modifications, involving eg mmapped
files.
2019-03-04 13:57:23 -04:00
Joey Hess
519cadd1de
refactor RemoteTrackingBranch
Not specific to Import; export will use it too.
2019-03-01 14:47:56 -04:00
Joey Hess
1c8793691a
import: update location log for removed files 2019-03-01 13:26:59 -04:00
Joey Hess
d0066d9a87
fully update export db during import
This makes exporting immediately after import and merge be a no-op.
2019-02-27 15:29:41 -04:00
Joey Hess
b1f10fbb4d
update location log during import 2019-02-27 13:58:03 -04:00
Joey Hess
45aacd888b
import downloader complete (untested)
Made some api changes.

listImportableContents needs to provide the size
of the data, so the downloader can check disk free space.

retrieveExportWithContentIdentifier is passed the filepath to write to

Use temporary "CID" key during download of a ContentIdentifier from a
remote, so withTmp can be used and then move the content to the real key
once it's known.
2019-02-27 13:15:02 -04:00
Joey Hess
f4b773e9a1
incomplete action to download files from import 2019-02-26 15:25:28 -04:00
Joey Hess
e4e464da65
import command is updating tracking branch 2019-02-26 13:15:48 -04:00
Joey Hess
d805401708
fairly happy withbuildImportCommit now
still not yet tested
2019-02-23 15:47:55 -04:00
Joey Hess
33bb62ff13
fix parent 2019-02-22 12:44:22 -04:00
Joey Hess
bab6c570b0
buildImportTrees is fully working
buildImportCommit not yet tested
2019-02-22 12:41:17 -04:00
Joey Hess
7af55de83c
optimisation: use graftTree to remember the export branch
Sped up git-annex export in repositories with lots of keys.

Old method read whole git-annex branch tree into memory.
2019-02-22 11:16:22 -04:00
Joey Hess
8fdea8f444
WIP
Added graftTree but it's buggy.

Should use graftTree in Annex.Branch.graftTreeish; it will be faster
than the current implementation there.

Started Annex.Import, but untested and it doesn't yet handle tree
grafting.
2019-02-21 17:32:59 -04:00
Joey Hess
9887a378fe
renamings to make clean when old-format logs are being used 2019-02-21 13:43:44 -04:00
Joey Hess
a818bc5e73
add Database.ContentIdentifier
Does not yet have a way to update with new information from the
git-annex branch, which will be needed when multiple repos are importing
from the same remote.
2019-02-20 16:59:10 -04:00
Joey Hess
1e95bc4fd1
avoid git warning about CRLF in restagePointerFile
Saw it on Windows, could probably also happen on linux with some
configuration. Since this is a pointer file, the warning does not apply.
2019-02-18 18:35:36 -04:00
Joey Hess
1a367cad83
Fix path separator bug on Windows that completely broke git-annex since version 7.20190122. 2019-02-18 17:16:39 -04:00
Joey Hess
c7893bf9b7
init: Fix bug when direct mode needs to be enabled on a crippled filesystem, that left the repository in indirect mode. 2019-02-15 12:34:03 -04:00
Joey Hess
ed2a8498a4
fix build w/o libmagic 2019-02-09 13:49:46 -04:00
Joey Hess
9d53e1cddf
add a missing import 2019-02-08 13:24:21 -04:00
Joey Hess
6cba1950f2
avoid importing Git into module used by Setup
That would have needed Setup-Depends to include unix and other
libraries.
2019-02-08 13:16:10 -04:00
Joey Hess
c3f47ba389
make .noannex file prevent repo fixups
Avoid performing repository fixups for submodules and git-worktrees
when there's a .noannex file that will prevent git-annex from being
used in the repository.

This change is ok as long as the .noannex file is really going to prevent
git-annex from being used. But, init --force could override the file.
Which would result in the repo being initialized without the fixups
having run.

To avoid that situation decided to change init, to not let --force be used
to override a .noannex file. Instead the user can just delete the file.
2019-02-05 14:43:23 -04:00
Joey Hess
7b46b43c48
fromkey: Made idempotent
If the worktree file already exists, and is annexed and uses the same
key, avoid failing, nothing needs to be done.

Had to add lookupFileNotHidden to handle the case where an adjust --hide-missing
is in use, and the worktree file was hidden due to the object content
being missing. lookupFile would return the key of the hidden file,
but it makes sense that after fromkey succeeds, the worktree must
contain the file it was supposed to set up.
2019-02-05 13:13:13 -04:00
Joey Hess
a64fca92f6
Fix race in cleanup of othertmp directory that could result in a failure attempting to access it.
Need to create the directory after the lock is held, not before.

The other racing process would need to shut down at just the wrong time,
running cleanupOtherTmp.

This commit was sponsored by Boyd Stephen Smith Jr. on Patreon.
2019-02-02 13:56:31 -04:00
Joey Hess
2e9becf989
typo 2019-01-24 00:10:16 -04:00
Joey Hess
467c3b393d
refactor magic 2019-01-23 12:40:59 -04:00
Joey Hess
47cb1a98b6
remove seemingly bogus sigINT handler stuff
I am very doubtful that commit 613e747d91
was right about this doing anything, and I've verified that without it,
ctrl-c sends sigINT to child processes, and git-annex get does not
continue to the next item.

It seems likely that the real problem back then was something catching
the async exception.

Hard to see how installing a default signal handler could cause any
change from default behavior either.

One reason to want to get rid of this cruft now is that tasty has a
sigINT handler of its own, and this would override it.
(Tasty is not currently setting that handler up the way git-annex uses
it, due to a problem in tasty, but that will hopefully change.)
2019-01-21 17:21:02 -04:00
Joey Hess
67c5a628eb
fix build with old ghc 2019-01-18 14:09:35 -04:00
Joey Hess
d5f2463702
misctmp cleanup
* Switch to using .git/annex/othertmp for tmp files other than partial
  downloads, and make stale files left in that directory when git-annex
  is interrupted be cleaned up promptly by subsequent git-annex processes.
* The .git/annex/misctmp directory is no longer used and git-annex will
  delete anything lingering in there after it's 1 week old.

Also, in Annex.Ingest, made the filename it uses in the tmp dir be
prefixed with "ingest-" to avoid potentially using a filename used by
some other code.
2019-01-17 16:02:22 -04:00
Joey Hess
c3afb3434d
remove recently added cache from KeyVariety
Adding that field broke the Read/Show serialization back-compat,
and also the Eq and Ord instances were not blinded to it, which broke
git annex fsck and probably more.

I think that the new approach used in formatKeyVariety will be nearly
as fast, but have not benchmarked it.
2019-01-16 16:33:08 -04:00
Joey Hess
96aba8eff7
Revert "cache the serialization of a Key"
This reverts commit 4536c93bb2.

That broke Read/Show of a Key, and unfortunately Key is read in at least
one place; the GitAnnexDistribution data type.

It would be worth bringing this optimisation back, but it would need
either a custom Read/Show instance that preserves back-compat, or
wrapping Key in a data type that contains the serialization, or changing
how GitAnnexDistribution is serialized.

Also, the Eq instance would need to compare keys with and without a
cached seralization the same.
2019-01-16 16:21:59 -04:00
Joey Hess
2be6130053
better function name 2019-01-14 20:59:09 -04:00
Joey Hess
1b6319a2c8
double speed of keyFile
Optimising for the common case of nothing needing to be escaped, from 5.434 μs
to 1.727 μs.

In the uncommon case, it only runs around 70 ns slower.
2019-01-14 20:52:54 -04:00
Joey Hess
d9a33d98cf
remove unused import 2019-01-14 18:29:10 -04:00
Joey Hess
d5bbf123fd
bugfix
The first item in the list from split '&' did not start with a '&'
2019-01-14 17:42:18 -04:00
Joey Hess
e0c4ac99b5
convert serializeKey' to strict ByteString
The builder produces a lazy ByteString, and L.toStrict has to copy it,
but needing to use the builder is no longer to common case; the
serialization will normally be cached already as a strict ByteString,
and this avoids keyFile' needing to use L.toStrict . serializeKey'
2019-01-14 17:03:46 -04:00
Joey Hess
4536c93bb2
cache the serialization of a Key
This will speed up the common case where a Key is deserialized from
disk, but is then serialized to build eg, the path to the annex object.

It means that every place a Key has any of its fields changed, the cache
has to be dropped. I've grepped and found them all. But, it would be
better to avoid that gotcha somehow..
2019-01-14 16:37:28 -04:00
Joey Hess
5d98cba923
use ByteStrings when reading annex symlinks and pointers
Now there's a ByteString used all the way from disk to Key.

The main complication in this conversion was the use of fromInternalGitPath
in several places to munge things on Windows. The things that used that
were changed to parse the ByteString using either path separator.

Also some code that had read from files to a String lazily was changed
to read a minimal strict ByteString.
2019-01-14 15:37:08 -04:00
Joey Hess
0a8d93cb8a
convert to ByteString 2019-01-14 14:02:47 -04:00
Joey Hess
1791447cc8
avoid creating work tree files in subdirectories in an edge case
A keyName could contain "/", though this is unlikely and certianly only
ever could happen with WORM keys.

The change to addunused to escape that is no problem at all.

The change to VariantFile to escape it means that different versions of
git-annex could resolve a merge conflict differently in this case, which
is unfortunate. There would be different .variant files used, so the two
resolutions would themselves merge together without additional
conflicts, but the user would have to clean up the extra .variant
files.
2019-01-14 13:14:25 -04:00
Joey Hess
d3ab5e626b
rename key2file and file2key
What these generate is not really suitable to be used as a filename,
which is why keyFile and fileKey further escape it. These are just
serializing Keys.

Also removed a quickcheck test that was very unlikely to test anything
useful, since it relied on random chance creating something that looks
like a serialized key. The other test is sufficient for testing what
that was intended to test anyway.
2019-01-14 13:03:35 -04:00
Joey Hess
ff0a2bee2d
avoid unnecessary conversion from and back to ByteString 2019-01-14 12:40:13 -04:00
Joey Hess
727767e1e2
make everything build again after ByteString Key changes 2019-01-11 16:39:46 -04:00
Joey Hess
2eadb6cd68
convert transitions.log to attoparsec and bytestring-builder
Not likely to be any speed gain here, but this completes porting every
log file over.

And, it let me get rid of code copied from ghc and modified, so
simplifying the licensing.
2019-01-10 17:13:30 -04:00
Joey Hess
591e4b145f
convert old uuid-based log parsers to attoparsec
This preserves the workaround for the old bug that caused NoUUID items
to be stored in the log, prefixing log lines with " ". It's now handled
implicitly, by using takeWhile1 (/= ' ') to get the uuid.

There is a behavior change from the old parser, which split the value
into words and then recombined it. That meant that "foo  bar" and "foo\tbar"
came out as "foo bar". That behavior was not documented, and seems
surprising; it meant that after a git-annex describe here "foo  bar",
you wouldn't get that same string back out when git-annex displayed repo
descriptions.

Otoh, some other parsers relied on the old behavior, and the attoparsec
rewrites had to deal with the issue themselves...

For group.log, there are some edge cases around the user providing a
group name with a leading or trailing space. The old parser would ignore
such excess whitespace. The new parser does too, because the alternative
is to refuse to parse something like " group1  group2 " due to excess
whitespace, which would be even more confusing behavior.

The only git-annex branch log file that is not converted to attoparsec
and bytestring-builder now is transitions.log.
2019-01-10 16:34:20 -04:00
Joey Hess
66603d6f75
attoparsec parsers for all new-format uuid-based logs
There should be some speed gains here, especially for chunk and remote
state logs, which are queried once per key.

Now only old-format uuid-based logs still need to be converted to attoparsec.
2019-01-10 13:30:36 -04:00
Joey Hess
1928b82867
marginally faster VectorClock Builder
show of a POSIXTime is 7-bit ascii, so no need to use the filesystem
encoding on it
2019-01-09 14:17:00 -04:00
Joey Hess
232b1a08f3
simplification now that all logs use Builder 2019-01-09 14:10:05 -04:00
Joey Hess
2fef43dd71
convert all per-uuid log files to use Builder
Mostly didn't push the ByteStrings down very deep, but all of these log
files are not written to frequently at all, so slight remaining
innefficiency doesn't matter.

In Logs.UUID, removed the fixBadUUID code that cleaned up after a bug in
git-annex versions 3.20111105-3.20111110. In the unlikely event that a repo was
last touched by that ancient git-annex version, the descriptions of remotes
would appear missing when used with this version of git-annex. That is such minor
breakage, and so unlikely to still be a problem for any repos, that it was not
worth forward-porting that code to ByteString.
2019-01-09 14:00:35 -04:00
Joey Hess
de4980ef85
simplify Show instance by deriving 2019-01-09 13:13:31 -04:00
Joey Hess
2d46038754
converting more log files to use Builder
Probably not any particular speedup in this, since most of these logs
are not written to often. Possibly chunk log writing is sped up, but
writes to chunk logs are interleaved with expensive data transfers to
remotes, so unlikely to be a noticiable speedup.
2019-01-09 13:06:37 -04:00
Joey Hess
cb375977a6
follow-on changes from MetaData type changes
Including writing and parsing the metadata log files with
bytestring-builder and attoparsec.
2019-01-07 15:51:05 -04:00
Joey Hess
ef8ddaa713
attoparsec parser for presence logs 2019-01-03 15:27:29 -04:00
Joey Hess
bfc9039ead
convert git-annex branch access to ByteStrings and Builders
Most of the individual logs are not converted yet, only presense logs
have an efficient ByteString Builder implemented so far. The rest
convert to and from String.
2019-01-03 13:21:48 -04:00
Joey Hess
53905490df
convert Git.HashObject to use ByteStrings
Both lazy and strict, because sometimes it's more efficient to build a
small strict bytestring, and other times better to lazily stream.
2019-01-03 13:21:01 -04:00
Joey Hess
7d51b0c109
import Utility.FileSystemEncoding in Common 2019-01-03 11:37:02 -04:00
Joey Hess
894716512d
add a UUIDDesc type containing a ByteString
Groundwork for handling uuid.log using ByteString
2019-01-01 16:17:54 -04:00
Joey Hess
b3c69eaaf8
strict bytestring encoders and decoders
Only had lazy ones before.

Already sped up a few parts of the code.
2019-01-01 14:55:15 -04:00
Joey Hess
9cc6d5549b
convert UUID from String to ByteString
This should make == comparison of UUIDs somewhat faster, and perhaps a
few other operations around maps of UUIDs etc.

FromUUID/ToUUID are used to convert String, which is still used for all
IO of UUIDs. Eventually the hope is those instances can be removed,
and all git-annex branch log files etc use ByteString throughout, for a
real speed improvement.

Note the use of fromRawFilePath / toRawFilePath -- while a UUID usually
contains only alphanumerics and so could be treated as ascii, it's
conceivable that some git-annex repository has been initialized using
a UUID that is not only not a canonical UUID, but contains high unicode
or invalid unicode. Using the filesystem encoding avoids any problems
with such a thing. However, a NUL in a UUID seems extremely unlikely,
so I didn't use encodeBS / decodeBS to avoid their extra overhead in
handling NULs.

The Read/Show instance for UUID luckily serializes the same way for
ByteString as it did for String.
2019-01-01 14:45:33 -04:00
Joey Hess
84e71dae2e
comment typo 2018-12-30 15:51:20 -04:00
Joey Hess
a26514d67e
Fix doubled progress display when downloading an url when -J is used.
downloadUrl uses meteredFile, which sets up one progress meter,
and Remote.Web also uses metered, so two progress meters are displayed for
the same download.

Reversion introduced with the http-conduit switch in
c34152777b -- I don't know why the extra
call to metered was added there.

When -J is not used, the extra progress meter didn't display,
but an extra blank line did get output, which is also fixed.

This commit was sponsored by John Pellman on Patreon.
2018-12-30 12:29:49 -04:00
Joey Hess
5759e93444
honor init --version=5 on crippled filesystem
init: When --version=5 is passed on a crippled filesystem, use a v5 direct
mode repo as requested, rather than upgrading to v7 adjusted unlocked.

Fixed test suite on crippled filesystems, making it request --version=5
to test direct mode.
2018-12-19 13:17:04 -04:00
Joey Hess
6d381df0e6
sync --content: Fix dropping unwanted content from the local repository
This fixes a bug with the numcopies counting when using sync --content.
It did not always pass the local repo uuid to handleDropsFrom, and so the
numcopies counting was off by one, and unwanted local content would only be
dropped when there were numcopies+1 remote copies.

Also, support dropping local content that has reached an
exporttree remote that is not untrusted (currently only S3 remotes
with versioning).
2018-12-18 13:58:12 -04:00
Joey Hess
bbf7dcc193
fix bugs involving v7 unlocked files and direct mode
* Fix bug upgrading from direct mode to v7: when files in the repository
  were already committed as v7 unlocked files elsewhere, and the
  content was present in the direct mode repository, the annexed files
  got their full content checked into git.
* Fix bug that caused v7 unlocked files in a direct mode repository
  to get locked when committing.

This commit was sponsored by Nick Piper on Patreon.
2018-12-11 13:47:35 -04:00
Joey Hess
992110c1be
remove debug 2018-12-11 13:10:33 -04:00
Joey Hess
11dbb829bc
Fix a case where upgrade to v7 caused git to think that unlocked files were modified
When a file was already unlocked, but the annex object was present, the
upgrade process populated the unlocked file, but neglected to update the
index.

This commit was sponsored by Jochen Bartl on Patreon.
2018-12-11 13:05:03 -04:00
Joey Hess
029ae8d4db
support findred and --branch with file matching options
* findref: Support file matching options: --include, --exclude,
  --want-get, --want-drop, --largerthan, --smallerthan, --accessedwithin
* Commands supporting --branch now apply file matching options --include,
  --exclude, --want-get, --want-drop to filenames from the branch.
  Previously, combining --branch with those would fail to match anything.
* add, import, findref: Support --time-limit.

This commit was sponsored by Jake Vosloo on Patreon.
2018-12-09 13:38:35 -04:00
Joey Hess
aa8243df4c
dropunused edge case when annex.thin caused unused object to be modified
dropunused: When an unused object file has gotten modified, eg due to
annex.thin being set, don't silently skip it, but display a warning and let
--force drop it.

This commit was sponsored by Ethan Aubin.
2018-12-04 12:20:34 -04:00
Joey Hess
865d556103
fix init in cripped filesystem version issues
* init: When a crippled filesystem causes an adjusted unlocked branch to
  be used, set repo version to 7, which it neglected to do before.
* init: When on a crippled filesystem, and the git version is too old
  to use an adjusted unlocked branch, fall back to using direct mode.

This commit was sponsored by Ilya Shlyakhter on Patreon.
2018-12-03 12:57:23 -04:00
Joey Hess
efbf889e36
clarify comment 2018-11-30 12:37:45 -04:00
Joey Hess
ecdba3ed3f
When running youtube-dl to get a filename, pass --no-playlist
Seems that youtube-dl --get-filename on a playlist lists all the filenames
for the playlist, which can take quite some time. The code already only
took the first name, so --no-playlist can speed it up a lot.

This commit was sponsored by Brett Eisenberg on Patreon.
2018-11-28 17:14:47 -04:00
Joey Hess
65bb30bcf5
fix accidental commit 2018-11-20 11:43:33 -04:00
Joey Hess
9c0cece35a
followup 2018-11-19 18:12:03 -04:00
Joey Hess
9127fe4821
add DebugLocks build flag
Using the method described in
https://www.fpcomplete.com/blog/2018/05/pinpointing-deadlocks-in-haskell
but my own code to implement it, and with callstacks added.

This work is supported by the NIH-funded NICEMAN (ReproNim TR&D3) project.
2018-11-19 15:02:43 -04:00
Joey Hess
370757087d
catch lockContentForRemoval exception
removeKey should not throw exceptions, so catch exception there

In Assistant.Unused, keep trying to drop other keys if one drop fails
2018-11-15 15:39:57 -04:00
Joey Hess
d65df7ab21
improve messages around export conflicts
When an export conflict prevents accessing a special remote, be clearer
about what the problem is and how to resolve it.

This commit was sponsored by Trenton Cronholm on Patreon.
2018-11-13 15:50:06 -04:00
Joey Hess
983c9d5a53
git-annex-shell: fix transfer hang
Fix hang when transferring the same objects to two different clients at the
same time. (Or when annex.pidlock is used, two different objects to the
same or different clients.)

Could also potentially occur if a client was downloading an object and
somehow lost connection but that git-annex-shell was still running and
holding the transfer lock.

This does not guarantee that, if `transfer` fails for some other reason,
a DATA response will be made.

This work is supported by the NIH-funded NICEMAN (ReproNim TR&D3) project.
2018-11-06 13:00:37 -04:00
Joey Hess
1c71f563e0
explicitly close keys db in saveState
Should be redundant, but test suite is ending up with
a lot of extra sqlite connections before unused keys database handles
get garbage collected.

While running the test suite, I often saw 2-4+ open fds to the same
repo's keys database. After this change, it seems to mostly have 1,
occasionally 2.

And that might explain some of the strange sqlite failures in the test suite.
Especially the failures of test_lock_v7_force, where the keys database
gets renamed to a new directory out from under sqlite.
2018-10-30 22:19:32 -04:00
Joey Hess
5ab0f48ffb
high-res mtimes
Cache high-resolution mtimes for improved detection of modified files in v7
(and direct mode).

Including on Windows.

With back-compat support so old low-res mtimes won't break anything, and
so the new information also won't break old versions of git-annex.
2018-10-30 00:41:26 -04:00
Joey Hess
2e9f128dea
moved module and relicensed 2018-10-29 23:13:36 -04:00
Joey Hess
5d97898a7c
touch files with high-resolution timestamp
Needs unix 2.7.2, but that was included in ghc 8.0.1 (and much older)
so not really a new dep.
2018-10-29 22:25:21 -04:00
Joey Hess
497846d740
don't probe support for git-annex smudge --update
Any git-annex not supporting that doesn't support v7 repositories,
so will refuse to work in a repository that has this hook installed.
2018-10-26 14:37:43 -04:00
Joey Hess
3af29b3ba9
When annex.thin is set, allow hard links to be made between executable work tree files and annex objects.
This is safe, because while the annex object ends up executable,
there were already at least two other cases where it ended up executable:

1. git add an an executable file
2. chmod +x of a a non-executable worktree file that was hard linked to the
   annex object

After copy/hard link, it always fixes up the permissions to match the mode
of the worktree file, so when an executable annex object gets hard linked
to a non-executable worktree file, its execute bit gets removed.

Commit b7c8bf5274 already *said* it would do
this; I suspect the line of code I've removed was included in that commit
accidentially.

Also improves annex.thin documentation.

This commit was sponsored by Boyd Stephen Smith Jr. on Patreon.
2018-10-26 13:51:43 -04:00
Joey Hess
e2c894d3df
remove debug prints 2018-10-26 12:56:40 -04:00
Joey Hess
679146384b
remove 3 from supportedVersions (no behavior change)
It's auto-upgraded to 5, so does not need to be listed there.
Let's keep supportedVersions for versions that git-annex will actually
use without autoupgrading or demanding an upgrade.
2018-10-25 18:50:44 -04:00
Joey Hess
d59995b9ee
default to v7 adjusted unlocked in crippled filesystem
init: When in a crippled filesystem, initialize a v7 repository using an
adjusted unlocked branch, instead of a direct mode repository.

Direct mode is deprecated, so this makes sense to do already I hope.

This commit was sponsored by Ole-Morten Duesund on Patreon.
2018-10-25 18:49:57 -04:00
Joey Hess
5bb4308e1f
bump versionForAdjustedClone to v7 2018-10-25 18:46:16 -04:00
Joey Hess
b996b38b4f
fix autoupgrade from v6 to go to v7, not v5
v3 and v4 still autoupgrade to v5

And a few more upgrade doc updates.
2018-10-25 18:40:04 -04:00
Joey Hess
234842a347
v7
Install new git hooks in this version.

This does beg the question of what to do if git later gets eg a
post-smudge hook, that could run git-annex smudge --update. I think the
thing to do in that case would be to make git-annex smudge --update
install the new hooks. That way, as the user uses git-annex, the hook
would be created pretty quickly and without needing any extra syscalls
except for when git-annex smudge --update is called.

I considered doing something like that for installation of the
post-checkout and post-merge hooks, which would have avoided the need
for v7. But the only place it was cheap to do it would be in git-annex smudge
which could cheaply notice that smudge.log didn't exist yet and so know
the hooks needed to be installed. But since smudge used to populate pointer
files, it would be quite surprising if a single git checkout/merge failed
to update the work tree, and so that idea didn't work out.

The other reason for v7 is psychological -- users don't need to worry
about whether they might be running an old version of git-annex that
doesn't support their v7 repository very well. And bug reports about
"v6" have gotten a bit of a bad association in my head since they often
hit one of the known limitations and didn't realize it was experimental.

newtyped RepoVersion Int to avoid needing 2 comparisons in
versionSupportsUnlockedPointers etc. Also it's just nicer.

This commit was sponsored by John Pellman on Patreon.
2018-10-25 18:24:23 -04:00
Joey Hess
c28ca8294f
optimize smudge --clean of unmodified file
Usually, git won't run clean filter when a file is unmodified. But, when
git checkout runs git annex smudge --update, it populates the pointer
runs git update-index, which sees the file has changed and runs
git annex smudge --clean, which was checksumming the file unncessarily
as it re-ingested it.

With annex.thin set, this is the difference between git checkout of a
branch with a 1 gb file taking 30s and 0.1s.

This commit was sponsored by Brett Eisenberg on Patreon.
2018-10-25 16:46:46 -04:00
Joey Hess
daa259ec6a
remove unused import 2018-10-25 16:25:21 -04:00
Joey Hess
ca7de61454
git post-checkout and post-merge hooks
* init, upgrade: Install git post-checkout and post-merge hooks that run
  git annex smudge --update.
* precommit: Run git annex smudge --update, because the post-merge
  hook is not run when there is a merge conflict. So the work tree will
  be updated when a commit is made to resolve the merge conflict.
* precommit: Run git annex smudge --update, because the post-merge
  hook is not run when there is a merge conflict. So the work tree will
  be updated when a commit is made to resolve the merge conflict.
* Note that git has no hooks run after git stash or git cherry-pick,
  so the user will have to manually run git annex smudge --update
  after such commands.

Nothing currently installs the hooks into v6 repos that already exist.
Something will need to be done about that, either move this behavior to v7,
or document that the user will need to manually fix up their v6 repos.

This commit was sponsored by Eric Drechsel on Patreon.
2018-10-25 15:59:51 -04:00
Joey Hess
917a2c6095
defer updating unlocked files until after smudge filter
The smuge filter no longer provides git with annexed file content, to
avoid a git memory leak, and because that did not honor annex.thin.

git annex smudge --update has to be run after a checkout to update
unlocked files in the working tree with annexed file contents.

No hooks yet to run it.

This commit was sponsored by Nick Piper on Patreon.
2018-10-25 15:08:20 -04:00
Joey Hess
94aa0e2f64
fix strange test failure
It was trying to git annex adjust when in a direct mode repo, and that
of course fails. What I don't understand though, is how the test suite
managed to work before, when it was clearly checking the wrong thing.
Since the right way to fix it was obvious, I have not bisected.

This work is supported by the NIH-funded NICEMAN (ReproNim TR&D3) project.
2018-10-22 16:51:09 -04:00
Joey Hess
63cf3381f0
fix incomplete renaming of function 2018-10-22 16:44:18 -04:00
Joey Hess
4a6ebb1034
make sync update adjusted branch to hide/unhide
This completes initial support for --hide-missing, although the
assistant still needs to be updated and it perhaps needs to be sped up,
and maybe there needs to be a way for git-annex get to operate on
missing files. Opened some more todos for those things.

This commit was sponsored by Henrik Riomar.
2018-10-20 14:22:28 -04:00
Joey Hess
1191d3d22d
document --force 2018-10-20 11:53:35 -04:00
Joey Hess
4a788fbb3b
sync --content now supports --hide-missing adjusted branches
This relies on git ls-files --with-tree, which I'm using in a way that
its man page does not document. Hm. I emailed the git list to try to get
the docs improved, but at least the git test suite does test the same
kind of use case I'm using here.

Performance impact when not in an adjusted branch is limited to some
additional MVar accesses, and a single git call to determine the name of
the current branch. So very minimal.

When in an adjusted branch, the performance impact is
in Annex.WorkTree.lookupFile, which starts doing an equal amount of work
for files that didn't exist as it already did for files that were
unlocked.

This commit was sponsored by Jochen Bartl on Patreon.
2018-10-19 17:51:25 -04:00
Joey Hess
8be5a7269a
refactor getCurrentBranch
Both Command.Sync and Annex.Ingest had their own versions of this.

The one in Annex.Ingest used Git.Branch.currentUnsafe, but does not seem
to need it. That is only checking to see if it's in an adjusted unlocked
branch, and when in an adjusted branch, the branch does in fact exist,
so the added check that Git.Branch.current does is fine.

This commit was sponsored by Denis Dzyubenko on Patreon.
2018-10-19 17:29:18 -04:00
Joey Hess
24838547e2
adjust --hide-missing
* At long last there's a way to hide annexed files whose content
  is missing from the working tree: git-annex adjust --hide-missing
* When already in an adjusted branch, running git-annex adjust
  again will update the branch as needed. This is mostly
  useful with --hide-missing to hide/unhide files after their content
  has been dropped or received.

Still needs integration with sync and the assistant, and not as fast as it
could be, but already usable.

This commit was sponsored by Ethan Aubin.
2018-10-18 15:32:42 -04:00
Joey Hess
a6c8de84b6
improve types to allow combining some adjustments
Combinations like --hide-misssing --unlocked seem very useful. On the
other hand, combining --fix with --unlock doesn't make sense because a
file can be either unlocked or a symlink that can be fixed, but not
both.

Changed the serialization of HideMissingAdjustment in passing, but it
has not actually been used yet so nothing will be broken.

This commit was sponsored by Trenton Cronholm on Patreon.
2018-10-18 12:59:05 -04:00
Joey Hess
b2bafdb2fc
v6: Fix database inconsistency
That could cause git-annex to get confused about whether a locked file's
content was present, when the object file got touched.

Unfortunately this means more work sometimes when annex.thin is set,
since it has to checksum the file to tell if it's still got the right
content.

Had to suppress output when inAnnex calls isUnmodified, otherwise
"(checksum...)" would be printed in places it ought not to be,
eg "git annex get" could turn out not need to get anything, and
so only display that.

This commit was sponsored by Ole-Morten Duesund on Patreon.
2018-10-16 13:51:37 -04:00
Joey Hess
38d691a10f
removed the old Android app
Running git-annex linux builds in termux seems to work well enough that the
only reason to keep the Android app would be to support Android 4-5, which
the old Android app supported, and which I don't know if the termux method
works on (although I see no reason why it would not).
According to [1], Android 4-5 remains on around 29% of devices, down from
51% one year ago.

[1] https://www.statista.com/statistics/271774/share-of-android-platforms-on-mobile-devices-with-android-os/

This is a rather large commit, but mostly very straightfoward removal of
android ifdefs and patches and associated cruft.

Also, removed support for building with very old ghc < 8.0.1, and with
yesod < 1.4.3, and without concurrent-output, which were only being used
by the cross build.

Some documentation specific to the Android app (screenshots etc) needs
to be updated still.

This commit was sponsored by Brett Eisenberg on Patreon.
2018-10-13 01:41:11 -04:00
Joey Hess
a9dd087074
centralized "yes"/"no" parsing
This commit was sponsored by Jack Hill on Patreon.
2018-10-10 11:14:27 -04:00
Joey Hess
4b793fb077
Fix reversion in support of annex.web-options
Inverted logic added as part of the url security fix made it always use
curl when annex.security.allowed-http-addresses=all unless annex.web-options
was set.

That nobody noticed kind of makes me wonder if anyone uses
annex.web-options..

This commit was sponsored by Denis Dzyubenko on Patreon.
2018-10-04 13:43:29 -04:00
Joey Hess
177e45517f
improve back-compat of post-receive hook
* init: Improve generated post-receive hook, so it won't fail when
  run on a system whose git-annex is too old to support git-annex post-receive
* init: Update the post-receive hook when re-run in an existing repository.

This commit was sponsored by Jack Hill on Patreon.
2018-09-25 15:02:12 -04:00
Joey Hess
c63d28b39b
fix build with older ghc
null only used to work on lists, not sets.

Fixes the Android build and probably also i386ancient.

This commit was sponsored by mo on Patreon.
2018-09-12 14:10:08 -04:00
Joey Hess
fcff64f8bb
optimisation: avoid stat call
This commit was sponsored by Paul Walmsley on Patreon.
2018-09-05 17:26:12 -04:00
Joey Hess
b600ad71ce
make linkToAnnex freezeContent the object file
v6: Fix annex object file permissions when git-annex add is run on a
modified unlocked file, and in some related cases.

If a hard link is made, don't freeze it; annex.thin
uses writable object files.

Also: For some reason, linkToAnnex used to thawContent src. I can see no
reason why it needed to do that, so I eliminated that.

This commit was sponsored by Brock Spratlen on Patreon.
2018-09-05 15:27:22 -04:00
Joey Hess
0a7c5a9982
dropdead per-remote metadata
Had to refactor pure code into separate modules so it is accessible
inside Annex.Branch.Transitions.

This commit was sponsored by Peter on Patreon.
2018-09-05 13:52:46 -04:00
Joey Hess
813ee2357c
improve message 2018-09-02 16:08:00 -04:00
Joey Hess
76f32012af
avoid sync/assistant drop from appendonly
Make git-annex sync and the assistant skip trying to drop from appendonly
remotes since it's just going to fail.

git-annex drop and similar commands will still try to drop from
appendonly, so the user will see failure messages when they try to do
that. To do otherwise would be confusing since the user has explicitly
asked for a drop with those commands.

This commit was supported by the NSF-funded DataLad project.
2018-08-30 11:23:57 -04:00
Joey Hess
759a87ad70
fix git command queue to be concurrency safe
Probably not noticed until now because the queue is large enough that two
threads each filling theirs at the same time and flushing is unlikely to
happen.

Also made explicit that each worker thread gets its own queue.
I think that was the case before, but if something was put in the queue
before worker threads were forked off, they could have each inherited the
same queue.

Could have gone with a single shared queue, but per-worker queues is more
efficient, because a worker can add lots of stuff to its own queue without
any locking.

This commit was sponsored by Ole-Morten Duesund on Patreon.
2018-08-28 13:16:33 -04:00
Joey Hess
401a79675b
run git status before enabling clean filter
Avoids annex.largefiles inconsitency and also avoids a lot of
unneccessary calls to the clean filter when a large repo's clone
is being initialized.

This commit was supported by the NSF-funded DataLad project.
2018-08-28 10:36:22 -04:00
Joey Hess
10138056dc
v6: avoid accidental conversion when annex.largefiles is not configured
v6: When annex.largefiles is not configured for a file, running git add or
git commit, or otherwise using git to stage a file will add it to the annex
if the file was in the annex before, and to git otherwise. This is to avoid
accidental conversion.

Note that git-annex add's behavior has not changed, for reasons explained
in the added comment.

Performance: No added overhead when annex.largefiles is configured.
When not configured, there is an added call to catObjectMetaData,
which involves a round trip through git cat-file --batch.
However, the earlier catKeyFile primes the cache for it.

This commit was supported by the NSF-funded DataLad project.
2018-08-27 14:51:10 -04:00
Joey Hess
9ff1c62a4d
fix race
If a pointer file is being populated and something modifies it at the
same time, there was a race there the modified file's InodeCache
could get added into the keys database.

Note that replaceFile normally renames the temp file into place, so the
inode cache caculated for the temp file will still be good. If it has to
fall back to a copy, the worktree file won't be put in the inode cache.
This has the same result as if the worktree file gets touched, and will
be handled the same way. Eg, when dropping, isUnmodified will do an
expensive comparison and notice that the worktree file does have the
same content, and so drop it.

This commit was supported by the NSF-funded DataLad project.
2018-08-22 15:22:52 -04:00
Joey Hess
e094cf3377
split out modules from Annex.Content 2018-08-22 14:45:53 -04:00
Joey Hess
18ecf41917
avoid running reconcileStaged when the index has not changed
This commit was supported by the NSF-funded DataLad project.
2018-08-22 13:04:12 -04:00
Joey Hess
54d49eeac8
avoid update-index race
This commit was supported by the NSF-funded DataLad project.
2018-08-17 16:03:40 -04:00
Joey Hess
82c5dd8a01
queueing of internal IO actions on files
This would be better if getInternalFiles were
more polymorphic, but I can't see a good
way to accomplish that without messing with Data.Typeable,
which seemed like overkill.

Reverted CommandAction back to the simpler version.

This commit was sponsored by Eric Drechsel on Patreon.
2018-08-17 13:28:21 -04:00
Joey Hess
0f25d48639
pass absolute path to update-index
Test suite found a case where this is necessary.

And the man page says this, although current behavior is not as
documented..

           Note that files beginning with .  are discarded.
           This includes ./file and dir/./file. If you don’t want
           this, then use cleaner names.

This may hit path length limits on Windows. shrug

This commit was supported by the NSF-funded DataLad project.
2018-08-16 16:00:29 -04:00
Joey Hess
82a239675f
narrow the race where a file gets modified before update-index
Check just before running update-index if the worktree file's content is
still the same, don't update it when it's been modified. This narrows
the race window a lot, from possibly minutes or hours, to seconds or
less.

(Use replaceFile so that the worktree update happens atomically,
allowing the InodeCache of the new worktree file to itself be gathered
w/o any other race.)

This doesn't eliminate the race; it can still occur in the window before
update-index runs. When annex.queue is large, a lot of files will be
statted by the checks, and so the window may still be large enough to be a
problem.

When only a few files are being processed, the window is as small as it
is in the race where a modification gets overwritten by git-annex when
it updates the worktree. Or maybe as small as whatever race git
checkout/pull/merge may have when the worktree gets modified during it.
Still, I've kept a todo about this race.

This commit was supported by the NSF-funded DataLad project.
2018-08-16 15:56:43 -04:00
Joey Hess
82cfcfc838
better index file refresh method
Use git update-index --refresh, since it's a little bit more
efficient and the user can be told to run it if a locked index prevents
git-annex from running it.

This also fixes the problem where an annexed file was deleted in the index
and a get of another file that uses the same key caused the index update to
add back the deleted file. update-index will not add back the deleted file.

Documented in tips/unlocked_files.mdwn the gotcha that the index update
may conflict with other operations. I can't see any way to possibly avoid
that conflict.

One new todo about a race that causes a modification to be accidentially
staged.

Note that the assistant only flushes the git command queue when it
commits a modification. I have not tested the assistant with v6 unlocked
files, but assume most users of the assistant won't care if the index
shows a file as modified for a while.

This commit was supported by the NSF-funded DataLad project.
2018-08-16 14:16:24 -04:00
Joey Hess
5e87389f40
refactor 2018-08-15 13:46:28 -04:00
Joey Hess
48e9e12961
finally fixed v6 get/drop git status
After updating the worktree for an add/drop, update git's index, so git
status will not show the files as modified.

What actually happens is that the index update removes the inode
information from the index. The next git status (or similar) run
then has to do some work. It runs the clean filter.

So, this depends on the clean filter being reasonably fast and on git
not leaking memory when running it. Both problems were fixed in
a96972015d, but only for git 2.5. Anyone
using an older git will see very expensive git status after an add/drop.

This uses the same git update-index queue as other parts of git-annex, so
the actual index update is fairly efficient. Of course, updating the index
does still have some overhead. The annex.queuesize config will control how
often the index gets updated when working on a lot of files.

This is an imperfect workaround... Added several todos about new
problems this workaround causes. Still, this seems a lot better than the
old behavior.

This commit was supported by the NSF-funded DataLad project.
2018-08-14 16:23:58 -04:00
Joey Hess
4c918437ab
Fix git-annex branch data loss that could occur after git-annex forget --drop-dead
Added getStaged, to get the versions of git-annex branch files staged in its
index, and use during transitions so the result of merging sibling branches
is used.

The catFileStop in performTransitionsLocked is absolutely necessary,
without that the bug still occurred, because git cat-file was already
running and was looking at the old index file.

Note that getLocal still has cat-file look at the git-annex branch, not the
index. It might be faster if it looked at the index, but probably only
marginally so, and I've not benchmarked it to see if it's faster at all. I
didn't want to change unrelated behavior as part of this bug fix. And as
the need for catFileStop shows, using the index file has added
complications.

Anyway, it still seems fine for getLocal to look at the git-annex branch,
because normally the index file is updated just before the git-annex branch
is committed, and so they'll contain the same information. It's only during
a transition that the two diverge.

This commit was sponsored by Paul Walmsley in honor of Mark Phillips.
2018-08-06 17:36:30 -04:00
Joey Hess
1a02fc1159
Fix wrong sorting of remotes when using -J
It was sorting by uuid, rather than cost!

Avoid future bugs of this kind by changing the Ord to primarily compare
by cost, with uuid only used when the cost is the same.

This commit was supported by the NSF-funded DataLad project.
2018-08-03 13:10:50 -04:00
Joey Hess
ae11394efa
added annex.commitmessage
Added annex.commitmessage config that can specify a commit message for the
git-annex branch instead of the usual "update".

This commit was supported by the NSF-funded DataLad project.
2018-08-02 14:06:06 -04:00
Joey Hess
1a9f5ecdb8
fix android/old ghc build 2018-07-19 13:27:29 -04:00
Joey Hess
081f8e57c6
Support working trees set up by git-worktree.
Support working trees set up by git-worktree, by setting up some symlinks
such that git-annex links work right.

Also improved support for repositories created with --separate-git-dir.
At least recent git makes a .git file for those (older may have used a
symlink?), so that also needs to be converted to a symlink.

This commit was sponsored by Nick Piper on Patreon.
2018-07-18 14:27:26 -04:00
Joey Hess
d3f06ad112
avoid unneccessary Maybe 2018-07-16 12:06:06 -04:00
Joey Hess
a63bbd868b
make addurl of media url fail when youtube-dl is disabled
addurl: When security configuration prevents downloads with youtube-dl,
still check if the url is one that it supports, and fail downloading it,
instead of downloading the raw web page.
2018-06-28 13:01:18 -04:00
Joey Hess
2c62f8e63d
remove empty tmp workdir on failure
No point in keeping an empty tmp workdir around.

The associated tmp object file is retained even if empty, didn't want to
deal with any possible races with something else downloading to that
file at the same time this would check if it's empty. Anyhow, temp
object files are normally retained, and this will get cleaned out the
same way those do, by dropunused.
2018-06-28 12:58:11 -04:00
Joey Hess
eb8a8976a9
comment 2018-06-21 20:54:02 -04:00
Joey Hess
b657242f5d
enforce retrievalSecurityPolicy
Leveraged the existing verification code by making it also check the
retrievalSecurityPolicy.

Also, prevented getViaTmp from running the download action at all when the
retrievalSecurityPolicy is going to prevent verifying and so storing it.

Added annex.security.allow-unverified-downloads. A per-remote version
would be nice to have too, but would need more plumbing, so KISS.
(Bill the Cat reference not too over the top I hope. The point is to
make this something the user reads the documentation for before using.)

A few calls to verifyKeyContent and getViaTmp, that don't
involve downloads from remotes, have RetrievalAllKeysSecure hard-coded.
It was also hard-coded for P2P.Annex and Command.RecvKey,
to match the values of the corresponding remotes.

A few things use retrieveKeyFile/retrieveKeyFileCheap without going
through getViaTmp.
* Command.Fsck when downloading content from a remote to verify it.
  That content does not get into the annex, so this is ok.
* Command.AddUrl when using a remote to download an url; this is new
  content being added, so this is ok.

This commit was sponsored by Fernando Jimenez on Patreon.
2018-06-21 13:37:01 -04:00
Joey Hess
923578ad78
improve error message
This commit was sponsored by Jack Hill on Patreon.
2018-06-19 14:21:41 -04:00
Joey Hess
cc08135e65
prevent using local http proxies per annex.security.allowed-http-addresses
A local http proxy would bypass the security configuration. So,
the security configuration has to be applied when choosing whether to
use the proxy.

While http rebinding attacks against the dns lookup of the proxy IP
address seem very unlikely, this implementation does prevent them, since
it resolves the IP address once, checks it, and then reconfigures
http-client's proxy using the resolved address.

This commit was sponsored by Ole-Morten Duesund on Patreon.
2018-06-18 13:32:20 -04:00
Joey Hess
e62c4543c3
default to not using youtube-dl, for security
Pity, but same reasoning as curl applies to it.

This commit was sponsored by Peter on Patreon.
2018-06-17 14:51:02 -04:00
Joey Hess
b54b2cdc0e
prevent http connections to localhost and private ips by default
Security fix!

* git-annex will refuse to download content from http servers on
  localhost, or any private IP addresses, to prevent accidental
  exposure of internal data. This can be overridden with the
  annex.security.allowed-http-addresses setting.
* Since curl's interface does not have a way to prevent it from accessing
  localhost or private IP addresses, curl defaults to not being used
  for url downloads, even if annex.web-options enabled it before.
  Only when annex.security.allowed-http-addresses=all will curl be used.

Since S3 and WebDav use the Manager, the same policies apply to them too.

youtube-dl is not handled yet, and a http proxy configuration can bypass
these checks too. Those cases are still TBD.

This commit was sponsored by Jeff Goeke-Smith on Patreon.
2018-06-17 13:30:28 -04:00
Joey Hess
28720c795f
limit url downloads to whitelisted schemes
Security fix! Allowing any schemes, particularly file: and
possibly others like scp: allowed file exfiltration by anyone who had
write access to the git repository, since they could add an annexed file
using such an url, or using an url that redirected to such an url,
and wait for the victim to get it into their repository and send them a copy.

* Added annex.security.allowed-url-schemes setting, which defaults
  to only allowing http and https URLs. Note especially that file:/
  is no longer enabled by default.

* Removed annex.web-download-command, since its interface does not allow
  supporting annex.security.allowed-url-schemes across redirects.
  If you used this setting, you may want to instead use annex.web-options
  to pass options to curl.

With annex.web-download-command removed, nearly all url accesses in
git-annex are made via Utility.Url via http-client or curl. http-client
only supports http and https, so no problem there.
(Disabling one and not the other is not implemented.)

Used curl --proto to limit the allowed url schemes.

Note that this will cause git annex fsck --from web to mark files using
a disallowed url scheme as not being present in the web. That seems
acceptable; fsck --from web also does that when a web server is not available.

youtube-dl already disabled file: itself (probably for similar
reasons). The scheme check was also added to youtube-dl urls for
completeness, although that check won't catch any redirects it might
follow. But youtube-dl goes off and does its own thing with other
protocols anyway, so that's fine.

Special remotes that support other domain-specific url schemes are not
affected by this change. In the bittorrent remote, aria2c can still
download magnet: links. The download of the .torrent file is
otherwise now limited by annex.security.allowed-url-schemes.

This does not address any external special remotes that might download
an url themselves. Current thinking is all external special remotes will
need to be audited for this problem, although many of them will use
http libraries that only support http and not curl's menagarie.

The related problem of accessing private localhost and LAN urls is not
addressed by this commit.

This commit was sponsored by Brett Eisenberg on Patreon.
2018-06-16 11:57:50 -04:00
Joey Hess
b94294a43d
remove no longer needed uuid check in prepSocket
Since 3dd43df9c2, the socket warmup does
not run git-annex-shell on the remote host, and the point of this check
was to avoid error messages running git-annex-shell when it was not
installed. So the check is not needed any longer.

Also, this is one of only two uses of remoteGitConfig, which
I want to get rid of for reasons explained in
fc5888300f.

This commit was sponsored by Fernando Jimenez on Patreon.
2018-06-05 12:51:17 -04:00
Joey Hess
d7021d420f
reuse hashes of dotfiles/dirs/submodules when entering view
This fixes a crash when a git submodule has a name starting with a dot.
Such a submodule might contain dotfiles that are intended to be used when
inside the view (since a dot-directory that's not a submodule was already
preserved when entering a view). So, rather than eliminating the submodule
from the view, its git ls-files --stage hash is copied over into the view.

dotfiles/dirs have their git ls-files --stage hashes similarly copied over
to the view. This is more efficient and simpler than the old method,
and also won't break if git ever adds a new type of tree item, like was
done with submodules.

Since the content of dotfiles in the working tree is no longer hashed
when entering a view, when there are unstaged modifications, they are
not included in the view branch. Entering the view branch still works,
but git checkout shows "M .dotfile", and git diff will show the unstaged
changes. This seems like an improvement over the old behavior.

Also made Command.View not delete empty directories that are submodules
when entering a view, while still deleting other empty directories.

This commit was supported by the NSF-funded DataLad project.
2018-05-14 15:35:20 -04:00
Joey Hess
0b7f6d24d3
rename BlobType and add submodule to it
This was badly named, it's a not a blob necessarily, but anything that a
tree can refer to.

Also removed the Show instance which was used for serialization to git
format, instead use fmtTreeItemType.

This commit was supported by the NSF-funded DataLad project.
2018-05-14 14:45:41 -04:00
Joey Hess
db720f6a9c
Display error message when http download fails.
* Display error message when http download fails.

  There's nothing in the http-client library to nicely format a http
  exception, so in some cases it has to fall back to using show on it.
  Seems better than just saying "it failed" or only showing the http
  status code.

* Avoid forward retry when 0 bytes were received.

  forwardRetry was comparing Nothing to Just 0, and so thought there had
  been progress made when 0 bytes were received.

This commit was supported by the NSF-funded DataLad project.
2018-05-08 16:11:45 -04:00
Joey Hess
d1961e4498
back out incorrect IO interleaving change
Fix regression in last release that crashes when using --all or running
git-annex in a bare repository. May have also affected git-annex unused and
git-annex info.

Reversed the order of the (++) in Annex.Branch.files so --all will stream
lazily still when there are not a bunch of uncommitted journal files.
Added a todo to maybe improve this later.

This commit was sponsored by Trenton Cronholm on Patreon.
2018-05-08 13:54:42 -04:00
Joey Hess
bea0ad220a
avoid --all buffering list of all keys
In Annex.Branch.branch, the (++) was killing laziness.
Rewrote so it streams lazily.

filterM also kills laziness, so made loggedKeys use a Unchecked type,
and check if the key is dead in the seek loop.

Note that loggedKeysFor still buffers, so git-annex info <remote> and
git-annex unused --from remote still use more memory than necessary.

Also removed some unused functions from Annex.Journal.
2018-04-26 16:00:20 -04:00
Joey Hess
f56594af9e
finish fixing inverted Ord for TrustLevel
Flipped all comparisons. When a TrustLevel list was wanted from Trusted
downwards, used Down to compare it in that order.

This commit was sponsored by mo on Patreon.
2018-04-13 15:17:54 -04:00
Joey Hess
a0e4b9678b
fix inverted Ord for TrustLevel (intermediate commit)
This commit removes the Ord and Enum instances, commenting out all code
that depends on them, to make sure that all code effected by the
inversion fix has been identified.

(Assuming no ifdefs involve TrustLevel.)

The next commit will fix up all the identified code.
2018-04-13 14:50:14 -04:00
Joey Hess
af8546990d
move: --safe/--unsafe and potential drop race fix
move: Added --safe option, which makes move honor numcopies settings.
Also --unsafe enables the default behavior, anticipating that the
default may one day change.

This commit was sponsored by Ethan Aubin.
2018-04-09 16:20:10 -04:00
Joey Hess
de552bd469
fix thinko for the second time
It's almost like this part of haskell syntax is not very good..
2018-04-09 13:10:44 -04:00
Joey Hess
61aa56465b
fix pattern match 2018-04-06 23:11:20 -04:00
Joey Hess
c34152777b
Use http-conduit for url downloads by default, annex.web-options enables curl
* For url downloads, git-annex now defaults to using a http library,
  rather than wget or curl. But, if annex.web-options is set, it will
  use curl. To use the .netrc file, run:
    git config annex.web-options --netrc
* git-annex no longer uses wget (and wget is no longer shipped with
  git-annex builds).

Note that curl is always run in silent mode, since the new API for
download has a MeterUpdate and doesn't make way for curl progress
output. It might be worth writing a parser for curl's progress output
to update the meter when using it, but I didn't bother with this edge
case for now.

This commit was supported by the NSF-funded DataLad project.
2018-04-06 17:36:20 -04:00
Joey Hess
9b98d3f630
better HTTP connection reuse
Enable HTTP connection reuse across multiple files, when git-annex
uses http-conduit. Before, a new Manager was created each time
Utility.Url used it. Now, a single Manager gets created the first time,
so connections are reused.

Doesn't help when external programs are used for url download,
but does speed up addurl --fast, fsck --from web, etc.

Testing fsck --fast --from web with 3 files, over high-latency
satellite internet, it sped up from 19.37s to 14.96s.

This commit was supported by the NSF-funded DataLad project.
2018-04-04 15:39:40 -04:00
Joey Hess
2ec07bc29f
Avoid running annex.http-headers-command more than once. 2018-04-04 15:15:08 -04:00
Joey Hess
ef389722ae
don't copy old date metadata when adding new version of a file
When adding a new version of a file, and annex.genmetadata is enabled,
don't copy the data metadata from the old version of the file, instead use
the mtime of the file. Rationalle being that the user has requested to
generate metadata and so would expect to get the new mtime into metadata.

Also, avoid warning about copying metadata when all the old metadata is
date metadata. Which was rather the harder part.

This commit was sponsored by Boyd Stephen Smith Jr. on Patreon.
2018-04-04 13:58:16 -04:00
Joey Hess
9ec1d6b077
add units 2018-03-29 13:31:53 -04:00
Joey Hess
961fa377d9
Also do forward retrying in cases where no exception is thrown, but the transfer failed.
I think this used to be the case, but it was accidentially lost way back in
commit 3887432c54. Normally, transfers do not
throw exceptions, so probably forward retrying was rarely done due to that
oversight.

This also affects the new annex.retry etc configuration. If a transfer
fails, without making any progress, eg because the file is not present on
the remote or the remote is not accessible, it will now retry when
configuration calls for it. In some cases such a retry is not desirable,
for example the remote could be accessible and not have a copy of the file
that the local repo thinks it has. I see no way to distinguish such cases
from cases where a retry should really be done. So, it'll be up to the user
to configure it to work for them.
2018-03-29 13:22:49 -04:00
Joey Hess
46d4316954
implement annex.retry et al
Added annex.retry, annex.retry-delay, and per-remote versions to configure
transfer retries.

This commit was supported by the NSF-funded DataLad project.
2018-03-29 13:04:07 -04:00
Joey Hess
ac6f58d642
fix ssh warmup hang
Fix race condition in ssh warmup that caused git-annex to get stuck and
never process some while when run with high levels of concurrency.

So far, I've isolated the problem to processTranscript, which hangs
reading output from ssh in this situation. I don't yet understand why
processTranscript behaves that way.

Since here we don't care about the ssh output, and only want to /dev/null
it, changed to not use processTranscript, avoiding its problem.

This commit was supported by the NSF-funded DataLad project.
2018-03-15 15:04:15 -04:00
Joey Hess
ed81762c86
avoid compiler warning
add type sig so it's clear createtfile returns unit
2018-03-15 13:21:32 -04:00
Joey Hess
10d3b7fc62
Fix reversion introduced in 6.20171214 that caused concurrent transfers to incorrectly fail with "transfer already in progress".
Avoid creating transfer info file before transfer lock is created and
locked.

The wrong order for one thing caused transfer info to be overwritten
when a transfer was already in progress.

But worse, it caused checkTransfer to see the transfer info,
and so lock the transfer lock in order to verify the transfer was not in
progress. Which in a concurrent situation, prevented the transferrer
from locking the transfer lock, so it failed with "transfer already in
progress".

Note that the transferinfo command does not lock the transfer lock
before creating the transfer info. But, that's only run after
recvkey is running, and recvkey does lock the transfer lock, so that
seems more or less ok. (Other than being a super complicated legacy mess
that the P2P code has mostly obsoleted now.)

This commit was supported by the NSF-funded DataLad project.
2018-03-14 18:55:34 -04:00
Joey Hess
4015c5679a
force verification when resuming download
When resuming a download and not using a rolling checksummer like rsync,
the partial file we start with might contain garbage, in the case where a
file changed as it was being downloaded. So, disabling verification on
resumes risked a bad object being put into the annex.

Even downloads with rsync are currently affected. It didn't seem worth the
added complexity to special case those to prevent verification, especially
since git-annex is using rsync less often now.

This commit was sponsored by Brock Spratlen on Patreon.
2018-03-13 14:50:49 -04:00
Joey Hess
31e1adc005
deal with unlocked files
P2P protocol version 1 adds VALID|INVALID after DATA; INVALID means the
file was detected to change content while it was being sent and so we
may not have received the valid content of the file.

Added new MustVerify constructor for Verification, which forces
verification even when annex.verify=false etc. This is used when INVALID
and in protocol version 0.

As well as changing git-annex-shell p2psdio, this makes git-annex tor
remotes always force verification, since they don't yet use protocol
version 1. Previously, annex.verify=false could skip verification when
using tor remotes, and let bad data into the repository.

This commit was sponsored by Jack Hill on Patreon.
2018-03-13 14:27:14 -04:00
Joey Hess
3dd43df9c2
Better ssh connection warmup when using -J for concurrency.
Avoids ugly messages when forced ssh command is not git-annex-shell.

This commit was sponsored by Ole-Morten Duesund on Patreon.
2018-03-07 17:30:14 -04:00
Joey Hess
f4103744c3
make sure that lockContentShared is always paired with an inAnnex check
lockContentShared had a screwy caveat that it didn't verify that the content
was present when locking it, but in the most common case, eg indirect mode,
it failed to lock when the content is not present.

That led to a few callers forgetting to check inAnnex when using it,
but the potential data loss was unlikely to be noticed because it only
affected direct mode I think.

Fix data loss bug when the local repository uses direct mode, and a
locally modified file is dropped from a remote repsitory. The bug
caused the modified file to be counted as a copy of the original file.
(This is not a severe bug because in such a situation, dropping
from the remote and then modifying the file is allowed and has the same
end result.)

And, in content locking over tor, when the remote repository is
in direct mode, it neglected to check that the content was actually
present when locking it. This could cause git annex drop to remove
the only copy of a file when it thought the tor remote had a copy.

So, make lockContentShared do its own inAnnex check. This could perhaps
be optimised for direct mode, to avoid the check then, since locking
the content necessarily verifies it exists there, but I have not bothered
with that.

This commit was sponsored by Jeff Goeke-Smith on Patreon.
2018-03-07 14:23:52 -04:00
Joey Hess
09e73a3ab6
annex.merge-annex-branches
Added annex.merge-annex-branches config setting which can be used to
disable automatic merge of git-annex branches.

I wonder if git-annex merge/sync/assistant should disable this
setting? Not sure yet, so have not done so. May be that users will not set
it in git config, but pass it via -c to commands that need it.

Checking the config setting adds a very small overhead, but it's
only checked once per command so should be insignificant.

This commit was supported by the NSF-funded DataLad project.
2018-02-22 14:25:32 -04:00
Joey Hess
2e25185a9c
Remove temporary code added in 6.20160619 to prime the mergedrefs log.
Repositories that are upgraded from before that version to this
one will not break, but will just not see the benefit of the mergedrefs log
speeding things up, until one new ref gets merged in.
2018-02-22 12:31:27 -04:00
Joey Hess
2b66492d6e
Improve startup time for commands that do not operate on remotes
And for tab completion, by not unnessessarily statting paths to remotes,
which used to cause eg, spin-up of removable drives.

Got rid of the remotes member of Git.Repo. This was a bit painful.

Remote.Git modifies the list of remotes as it reads their configs,
so still need a persistent list of remotes. So, put it in as
Annex.gitremotes. It's only populated by getGitRemotes, so commands
like examinekey that don't care about remotes won't do so.

This commit was sponsored by Jake Vosloo on Patreon.
2018-01-09 16:22:07 -04:00
Joey Hess
faf03ee4da
more core.sharedRepository perm fixes
Fix more places where files in .git/annex/ were written with modes that
did not take the core.sharedRepository config into account.

This commit was sponsored by Jeff Goeke-Smith on Patreon.
2018-01-04 14:46:58 -04:00
Joey Hess
24df95f0f6
Fix several places where files in .git/annex/ were written with modes that did not take the core.sharedRepository config into account.
git grep writeFile finds some more that might also be problems, but
for now I've concentrated on .git/annex/ log files. There are certianly
cases where writeFile is not a problem too.

This commit was sponsored by mo on Patreon.
2018-01-02 17:25:25 -04:00
Joey Hess
25703e1413
finally really add back custom-setup stanza
Fourth or fifth try at this and finally found a way to make it work.

Absurd amount of busy-work forced on me by change in cabal's behavior.
Split up Utility modules that need posix stuff out of ones used by
Setup. Various other hacks around inability for Setup to use anything
that ifdefs a use of unix.

Probably lost a full day of my life to this.
This is how build systems make their users hate them. Just saying.
2017-12-31 16:36:39 -04:00
Joey Hess
2bfdd690e2
addurl: Fix encoding of filename queried from youtube-dl when in --fast mode.
And also now in non-fast mode, since it was just changed to query for the
filename separately.

And avoid processTranscript which mixed up stdout and stderr and could have
led to weirdness if there were warnings that didn't get suppressed.
2017-12-31 15:19:01 -04:00
Joey Hess
fcdd9ce788
repeated addurl behavior reversion fix
addurl: When the file youtube-dl will download is already an annexed file,
don't download it again and fail to overwrite it, instead just do nothing,
like it used to when quvi was used.

This commit was sponsored by Anthony DeRobertis on Patreon.
2017-12-31 14:55:51 -04:00
Joey Hess
1f5bf73af0
Revert "git-annex.cabal: Add back custom-setup stanza, so cabal new-build works."
This reverts commit 51228c2306.

No, still doesn't work when built with cabal. It did with stack; stack
must somehow make the unix package implicitly available.

With cabal, System.Posix.Process and System.Posix.Env are both missing.
2017-12-31 14:09:41 -04:00
Joey Hess
51228c2306
git-annex.cabal: Add back custom-setup stanza, so cabal new-build works.
Seems I had all the work in past commits to make this build, at least on
linux. I'm actually surprised it does, without a unix dep, Utility.Env
still builds ok somehow despite using System.Posix.Env.

This commit was sponsored by Fernando Jimenez on Patreon.
2017-12-31 13:54:41 -04:00
Joey Hess
664a4d1873
remove ifdef for older base than git-annex.cabal allows 2017-12-14 13:45:50 -04:00
Joey Hess
308cd1383c
fold Build/SysConfig.hs into BuildInfo via include
This avoids warnings from stack about the module not being listed in the
cabal file. So, the generated file is also renamed to Build/SysConfig.

Note that the setup program seems to be cached despite these changes; I
had to cabal clean to get cabal to update it so that Build/SysConfig was
written.

This commit was sponsored by Jochen Bartl on Patreon.
2017-12-14 12:46:57 -04:00
Joey Hess
f824a1f41d
reorg 2017-12-14 11:26:59 -04:00
Joey Hess
3cc94c1667
.noannex file
A top-level .noannex file will prevent git-annex init from being used in a
repository. This is useful for repositories that have a policy reason not
to use git-annex. The content of the file will be displayed to the user who
tries to run git-annex init.

This also affects git annex reinit and initialization via the webapp.
It does not affect automatic inits, when there's a sibling git-annex branch
already.

This commit was supported by the NSF-funded DataLad project.
2017-12-13 14:34:32 -04:00
Joey Hess
cc6f5d6e49
avoid trying youtube-dl for ftp and file url schemes
This commit was sponsored by John Peloquin on Patreon.
2017-12-11 12:46:34 -04:00
Joey Hess
8990afaef0
fix regression in addurl --fast caused by youtube-dl support
Similar to c6e4bc0a22 but another code
path. As well as using youtube-dl unecessarily, it used the filename it
comes up with, which while nice for youtube videos, is not right for
other files.

This means more work is done for urls that youtube-dl does support,
but is probably more efficient for other urls, since it only downloads
the first chunk of content, while youtube-dl probably downloads more.

This commit was supported by the NSF-funded DataLad project.
2017-12-08 14:51:17 -04:00
Joey Hess
c6e4bc0a22
fix regression in addurl --file caused by youtube-dl support
Now youtubeDlCheck downloads the beginning of the url's content and
checks if it's html, only when it is does it pass it off the youtube-dl
to check if it supports it.

This means more work is done for urls that youtube-dl does support,
but is probably more efficient for other urls, since it only downloads
the first chunk of content, while youtube-dl probably downloads more.

As well as the reported bug, this also fixes behavior when an url
was added with youtube-dl, but the url content has now changed from
a html page to something else. Remote.Web.checkKey used to wrongly
succeed in that situation, since youtube-dl said sure it can download
that something else.

This commit was supported by the NSF-funded DataLad project.
2017-12-06 13:22:31 -04:00
Joey Hess
7c98f14391
avoid build warning when built w/o dbus 2017-12-06 10:54:48 -04:00
Joey Hess
fc845e6530
more lambda-case conversion 2017-12-05 15:00:50 -04:00
Joey Hess
639a6df58a
fix windows build 2017-12-05 13:11:03 -04:00
Joey Hess
1228fe8c86
honor annex.diskreserve when running youtube-dl
This commit was sponsored by André Pereira on Patreon.
2017-11-30 16:14:36 -04:00
Joey Hess
bbedc1c265
check youtube-dl for --fast and --relaxed when adding new file
The filename comes from youtube-dl also.

This commit was sponsored by Denis Dzyubenko on Patreon.
2017-11-30 14:57:20 -04:00
Joey Hess
2528e3ddb0
rethought --relaxed change
Better to make it not be surprising and slow, than surprising and fast.
--raw can be used when it needs to be really fast.

Implemented adding a youtube-dl supported url to an existing file.

This commit was sponsored by andrea rota.
2017-11-30 14:13:20 -04:00
Joey Hess
8a0038ec23
avoid warning when youtube-dl is not installed
If a user does not have it installed, don't warn on every imported item
about it.
2017-11-30 13:43:55 -04:00
Joey Hess
22a9389bc7
fix build 2017-11-30 13:21:19 -04:00
Joey Hess
31b4d7c6d0
pass git config options to youtube-dl --simulate
Decided not to --ignore-config by default. It the user has something in
their youtube-dl config files that breaks git-annex they can configure
it to use that option.
2017-11-29 20:07:03 -04:00
Joey Hess
24f27ec39d
convert importfeed to youtube-dl
Fully working, including --fast/--relaxed.

Note that, while git-annex addurl --relaxed is not going to check
youtube-dl, I kept git annex importfeed --relaxed checking it.
Thinking is that, let's not break people's importfeed cron jobs, and
importfeed does not typically have to check a large number of new items,
so it's ok if it's a little bit slower when used with youtube playlist
feeds.

importfeed's behavior is also improved (?) when a feed has links in it
to non-media files. Before, those were skipped. Now, the content of the
link is downloaded. This had to be done, because trying to use
youtube-dl is slow, and if those were skipped, it would have to check
every time importfeed was run. While this behavior change may not be
desirable for some feeds, that intersperse links to web pages with
enclosures, it will be desirable for other feeds, that have
non-enclosure directy links to media files.

Remove old quvi modules.

This commit was sponsored by Øyvind Andersen Holm.
2017-11-29 17:30:02 -04:00
Joey Hess
99bebdface
youtube-dl working
Including resuming and cleanup of incomplete downloads.

Still todo: --fast, --relaxed, importfeed, disk reserve checking,
quvi code cleanup.

This commit was sponsored by Anthony DeRobertis on Patreon.
2017-11-29 16:40:32 -04:00
Joey Hess
4e7e1fcff4
add gitAnnexTmpWorkDir and withTmpWorkDir
Needed to run youtube-dl in, but could also be useful for other stuff.

The tricky part of this was making the workdir be cleaned up whenever the
tmp object file is cleaned up.

This commit was sponsored by Ole-Morten Duesund on Patreon.
2017-11-29 13:53:39 -04:00
Joey Hess
53f91bddfa
generalize notifyTransfer
support not only AssociatedFile but also URLString
2017-11-28 16:11:30 -04:00
Joey Hess
9c7f168e89
typo 2017-11-16 12:54:42 -04:00
Joey Hess
187b3e7780
enable LambdaCase and convert around 10% of places that could use it
Needs ghc 7.6.1, so minimum base version increased slightly. All builds
are well above this version of ghc, and debian oldstable is as well.

Code that could use lambdacase can be found by running:
git grep -B 1 'case ' | less
and searching in less for "<-"

This commit was sponsored by andrea rota.
2017-11-15 16:59:32 -04:00
Joey Hess
1b6cbb63e9
still can't express custom-setup deps
They need unix on non-windows, for Utility.Env, which Build.Configure uses,
but cabal can't express that in a custom-setup stanza.

To avoid this problem, Utility.Env would need to be moved into
unix-compat..
2017-11-14 14:59:51 -04:00
Joey Hess
8d68112be5
split out setEnv to avoid adding dep
Windows needs the setenv package in custom-setup, but I don't want to
pull it in on unix, which would probably break some builds and need more
work. Instead, split out setEnv to a separate module.

Quite likely, unix-compat will get a portable environment layer, and
then both modules can be removed from here.

This commit was sponsored by Øyvind Andersen Holm.
2017-11-14 14:28:49 -04:00
Joey Hess
8dd84b87f9
use unix-compat 0.5 on windows
Re-applying 3ec579f5e1
2017-11-14 14:00:24 -04:00
Joey Hess
5f55082d10
Revert "use unix-compat 0.5 on windows"
This reverts commit 3ec579f5e1.

Too early for this; needs newer Win32 version. Le sigh.
2017-11-09 15:14:00 -04:00
Joey Hess
3ec579f5e1
use unix-compat 0.5 on windows
That version has my patches for the problems that Utility.PosixFiles
was working around, so am able to get rid of that module now.

This will later allow bringing back the custom-setup stanza in the cabal
file. It will need to depend on unix-compat 0.5 on all OS's, which I'm
not ready to do yet.

This commit was sponsored by Nick Daly on Patreon.
2017-11-09 12:47:05 -04:00
Joey Hess
68a9c867be
Fix exporting of non-annexed files to external special remotes.
Actual problem is the keyName was set to "Ref \"sha\"", which led to
this follow-on failure since it contained a space.

The bad data would also get into the export database when exporting to a
non-external special remote. Looking briefly at that, I don't think the bad
data will lead to anything more than a re-upload of the file content
now that the problem has been fixed.

This commit was sponsored by Peter Hogg on Patreon.
2017-10-30 12:47:13 -04:00