Commit graph

1738 commits

Author SHA1 Message Date
Joey Hess
065248f3d2 Added required content configuration.
This includes checking when dropping files that any required content
configuration is satisfied. However, it does not yet include an active
check on the required content; the location log is trusted when checking
the required content expression.
2014-03-29 16:03:33 -04:00
Joey Hess
3b8d5f03bb Fix glacier repo creation bug
Version 5.20140227 broke creation of glacier repositories, not including
the datacenter and vault in their configuration. This bug is fixed, but
glacier repositories set up with the broken version of git-annex need to
have the datacenter and vault set in order to be usable. This can be done
using git annex enableremote to add the missing settings. For details, see
http://git-annex.branchable.com/bugs/problems_with_glacier/
2014-03-27 14:30:36 -04:00
Joey Hess
2f538dd65c add --include-dotfiles: New option, perhaps useful for backups. 2014-03-26 14:52:07 -04:00
Joey Hess
72978a8de0 git-annex-shell: Make configlist automatically initialize a remote git repository, as long as a git-annex branch has been pushed to it, to simplify setup of remote git repositories, including via gitolite. 2014-03-26 14:22:21 -04:00
Joey Hess
0df4848a9e forget --drop-dead: Avoid removing the dead remote from the trust.log, so that if git remotes for it still exist anywhere, git annex info will still know it's dead and not show it. 2014-03-26 13:28:26 -04:00
Joey Hess
27d27b4da2 tahoe: Pass -d parameter before subcommand; putting it after the subcommand no longer works with tahoe-lafs version 1.10. (Thanks, Alberto Berti) 2014-03-26 12:59:54 -04:00
Joey Hess
f6eb967f1e webapp: Automatically install Nautilus integration scripts to get and drop files.
This commit was sponsored by Gian-Maria Daffre.
2014-03-22 15:51:30 -04:00
Joey Hess
fb8a32cc7f notifications on drop 2014-03-22 15:01:48 -04:00
Joey Hess
e426fac273 add desktop notifications
Motivation: Hook scripts for nautilus or other file managers
need to provide the user with feedback that a file is being downloaded.

This commit was sponsored by THM Schoemaker.
2014-03-22 14:12:19 -04:00
Joey Hess
7dc6804154 unannex, uninit: Avoid committing after every file is unannexed, for massive speedup.
pre-commit hook lock added, so unannex can prevent the hook from running
in a confusing state.

This commit was sponsored by Fredrik Hammar
2014-03-21 14:41:05 -04:00
Joey Hess
2230828779 prep release 2014-03-20 13:24:24 -04:00
Joey Hess
ed30b81e2c Improve behavior when unable to parse a preferred content expression (thanks, ion).
Fall back to "present" as the preferred conent expression, which will
not result in any content movement.
2014-03-20 00:10:12 -04:00
Joey Hess
f64c2d6138 toplevel lastchanged field 2014-03-19 19:10:55 -04:00
Joey Hess
1052eeface Windows: Fix some filename encoding bugs.
http://git-annex.branchable.com/bugs/Unicode_file_names_ignored_on_Windows/

Not a complete fix yet.
2014-03-19 15:57:56 -04:00
Joey Hess
caa97d1271 Each for each metadata field, there's now an automatically maintained "$field-lastchanged" that gives the timestamp of the last change to that field.
Note that this is a nearly entirely free feature. The data was already
stored in the metadata log in an easily accessible way, and already was
parsed to a time when parsing the log. The generation of the metadata
fields may even be done lazily, although probably not entirely (the map
has to be evaulated to when queried).
2014-03-18 18:55:43 -04:00
Joey Hess
40b599eff2 rsync special remote: Fix slashes when used on Windows. 2014-03-18 13:02:10 -04:00
Joey Hess
fb9ddfa231 map: Fix crash when one of the remotes of a repo is a local directory that does not exist, or is not a git repo. 2014-03-17 15:44:42 -04:00
Joey Hess
b4d12855d6
close 2014-03-17 15:26:18 -04:00
Joey Hess
8bcd67b9d8 metadata: Add --get (from bremner) 2014-03-15 17:29:40 -04:00
Joey Hess
3a9a1b9f63 doc updates for groupwanted 2014-03-15 16:39:13 -04:00
Joey Hess
417aea25be vicfg: Allows editing preferred content expressions for groups.
This is stored in the git-annex branch, but not yet actually hooked up and
used.
2014-03-15 16:17:01 -04:00
Joey Hess
b7eb1d834a Avoid encoding errors when using the unused log file. 2014-03-15 11:57:27 -04:00
Joey Hess
3551d40b05 "standard" can now be used as a first-class keyword in preferred content expressions.
For example "standard or (include=otherdir/*)" or even "not standard"

Note that the implementation avoids any potential for loops (if a
standard preferred content expression itself mentioned standard).

This commit was sponsored by Jochen Bartl.
2014-03-14 15:04:33 -04:00
Joey Hess
b7b9afa9ad Better workaround for problem umasks when eg, setting up ssh keys. 2014-03-14 13:37:58 -04:00
Joey Hess
ba02cd8a80 Fix ssh connection caching stop method to work with openssh 6.5p1, which broke the old method.
Old ssh did not check the hostname passed to -O stop, so I had used "any".
But now ssh does check it! I think this happened as part of the client-side
hostname canonicalization changes in 6.5p1, but have not verified that
introduced the problem.

The symptom was that it would try to dns lookup "any", which often caused a
bit of a delay at shutdown. And the old ssh connection kept running, so
it would do it over and over again.

Fixed by using localhost, which hopefully reliably resolves to some address
that ssh will accept.. Also nukeFile the socket after ssh has been asked to
shutdown, just in case.
2014-03-13 19:35:06 -04:00
Joey Hess
005e8744c1 Commands that allow specifying which repository to act on using the repository's description will now fail when multiple repositories match, rather than picking a repository at random.
So will --in=

Note that since limitIn is not used by preferred content expressions,
it's ok for it to throw an exception.
2014-03-13 15:36:58 -04:00
Joey Hess
4cc34973d9 copy --fast --to remote: Avoid printing anything for files that are already believed to be present on the remote. 2014-03-13 14:51:22 -04:00
Joey Hess
66b8b9c094 webapp: Use securemem for constant time auth token comparisons.
Debian stable does not have securemem, but neither does it have warp-tls,
so just disable use of securemem when not building with https support.
2014-03-12 21:41:20 -04:00
Joey Hess
0e0d396b27 Improve memory usage when git fsck finds a great many broken objects.
From 1.7 gb to 900 mb on 300 thousand unique reported shas.

When shas are not unique, this streams much better than before, so won't
buffer the full list before putting them into the Set and throwing away
dups. And when fsck output includes ignorable lines, especially
dangling object lines, they won't be buffered in memory at all.
2014-03-10 15:14:09 -04:00
Joey Hess
1f99a6778f Fix direct mode getKeysPresent false positive & also sped up direct mode unused and unannex
unused: In direct mode, files that are deleted from the work tree are no longer incorrectly detected as unused.

Direct mode `git annex info` slows down a bit due to more stringent
checking, but not by a lot.
2014-03-07 12:43:56 -04:00
Joey Hess
54746463bb webapp: Added a "Sync now" item to each repository's menu. 2014-03-06 18:11:44 -04:00
Joey Hess
4d06037fdd Fix zombie leak and general inneficiency when copying files to a local git repo.
Benchmarking this with 1000 small files being copied, the time reduced from
15.98s to 14.64s -- an 8% improvement in the non-data-transfer overhead of
git-annex copy.
2014-03-06 17:13:27 -04:00
Joey Hess
93a526ba82 prep release 2014-03-06 12:29:11 -04:00
Joey Hess
d32289bab0 assistant: Smarter log file rotation, which takes free disk space into account. 2014-03-05 18:26:53 -04:00
Joey Hess
a3fe8270ca annex.startupscan can be set to false to disable the assistant's startup scan. 2014-03-05 17:44:14 -04:00
Joey Hess
74d3949cd0 webapp: Include no-pty in ssh authorized_keys lines.
git-annex-shell does not need a pty, so this speeds things up.
Also, it may avoid weird misconfigured systems that try to run screen or
tmux on every ssh login from doing so.
2014-03-05 13:53:21 -04:00
Joey Hess
aa377ed567 webdav: When built with a new enough haskell DAV (0.6), disable the http response timeout, which was only 5 seconds. 2014-03-05 13:51:54 -04:00
Joey Hess
1f98d6fb00 glacier: Pass --region to glacier checkpresent.
I suppose this is not necessary when it has a local cache, so I didn't
notice it was missing.
2014-03-04 23:22:24 -04:00
Joey Hess
14d1e878ab sync: Automatically resolve merge conflict between and annexed file and a regular git file.
This is a new feature, it was not handled before, since it's a bit of an
edge case. However, it can be handled exactly the same as a file/dir
conflict, just leave the non-annexed item alone.

While implementing this, the core resolveMerge' function got a lot simpler
and clearer. Note especially that where before there was an asymetric call to
stagefromdirectmergedir, now graftin is called symmetrically in both cases.

And, in order to add that `graftin us`, the current branch needed to be
known (if there is no current branch, there cannot be a merge conflict).
This led to some cleanups of how autoMergeFrom behaved when there is no
current branch.

This commit was sponsored by Philippe Gauthier.
2014-03-04 19:35:55 -04:00
Joey Hess
4a847cdc08 finish fixing direct mode merge bug involving unstaged local files
Added test cases for both ways this can happen, with a conflict involving a
file, or a directory.

Cleaned up resolveMerge to not touch the work tree in direct mode, which
turned out to be the only way to handle things.. And makes it much nicer.

Still need to run test suite on windows.
2014-03-04 02:03:15 -04:00
Joey Hess
1192d98721 sync: Fix bug in direct mode that caused a file not checked into git to be deleted when merging with a remote that added a file by the same name. (Thanks, jkt) 2014-03-03 14:57:16 -04:00
Joey Hess
d0fce426c4 pre-commit-annex hook script to automatically extract metadata from lots of types of files
Using the extract(1) program to do the heavy lifting.

Decided to make git-annex run pre-commit-annex when committing. Since
git-annex pre-commit also runs it, it'll be run when git commit is run too,
via the pre-commit hook. This basically gives back the pre-commit hook
that git-annex took away. The implementation avoids repeatedly looking
for the hook script when the assistant is running and committing
repeatedly; only checks if the hook is available once.

To make the script simpler, made git-annex metadata -s field?=value
only set a field when it's not already got a value.

This commit was sponsored by bak.
2014-03-02 20:11:58 -04:00
Joey Hess
0ac8912f9c view: Refuse to enter a view when no branch is currently checked out. 2014-03-02 16:00:56 -04:00
Joey Hess
7d9486a709 vadd: Allow listing multiple desired values for a field. 2014-03-02 15:36:45 -04:00
Joey Hess
c2e8c21ca6 view, vfilter: Add support for filtering tags and values out of a view, using !tag and field!=value.
Note that negated globs are not supported. Would have complicated the code
to add them, without changing the data type serialization in a
non-backwards-compatable way.

This commit was sponsored by Denver Gingerich.
2014-03-02 14:53:19 -04:00
Joey Hess
6a355686ff annex.listen can be configured, instead of using --listen 2014-03-01 00:31:17 -04:00
Joey Hess
d41367cc08 remove buggy --listen=host:port support 2014-02-28 22:53:26 -04:00
Joey Hess
6469c1aca9 webapp: Don't list the public repository group when editing a git repository; it only makes sense for special remotes. 2014-02-28 20:37:03 -04:00
Joey Hess
c8528864e1 assistant --autostart: Refuse to start in a bare git repository. 2014-02-28 19:47:05 -04:00
Joey Hess
f70d0479d5 webapp: Refuse to start in a bare git repository. 2014-02-28 19:44:15 -04:00
Joey Hess
1681386b0d webapp: Filter out from Switch Repository list any repositories listed in autostart file that don't have a git directory anymore.
Trying to start in such a repo will, obviously, fail.

Note that assistant --autostart will try to start in such a repo, and fail,
but does start successfully in the other autostart repos.
2014-02-28 19:16:49 -04:00
Joey Hess
7ac37a7854 Probe for quvi version at run time.
Overhead: git annex addurl runs quvi --version once.
And more bloat to Annex state..
2014-02-28 14:54:02 -04:00
Joey Hess
0609d754cc prep release 2014-02-27 11:36:38 -04:00
Joey Hess
a1432bce2f Put non-object tmp files in .git/annex/misctmp, leaving .git/annex/tmp for only partially transferred objects.
This allows eg, putting .git/annex/tmp on a ram disk, if the disk IO
of temp object files is too annoying (and if you don't want to keep
partially transferred objects across reboots).

.git/annex/misctmp must be on the same filesystem as the git work tree,
since files are moved to there in a way that will not work cross-device,
as well as symlinked into there.

I first wanted to put the tmp objects in .git/annex/objects/tmp, but
that would pose transition problems on upgrade when partially transferred
objects existed.

git annex info does not currently show the size of .git/annex/misctemp,
since it should stay small. It would also be ok to make something clean it
out, periodically.
2014-02-26 16:52:56 -04:00
Joey Hess
a19ad12018 amusing caseo 2014-02-26 15:45:14 -04:00
Joey Hess
3b35e3f88a Disable test suite on sparc, which is missing optparse-applicative. 2014-02-26 13:44:28 -04:00
Joey Hess
692fbc6d7e Add build dep on regex-compat to fix build on mipsel, which lacks regex-tdfa. 2014-02-26 13:41:33 -04:00
Joey Hess
06e9080f01 metadata: FIeld names are now case insensative. 2014-02-25 18:45:09 -04:00
Joey Hess
3bf5183136 reorg 2014-02-25 17:25:53 -04:00
Joey Hess
2b66aaa763 Windows webdav: Fix DOS path separator bug.
Use posix </> etc for urls.
2014-02-25 15:26:33 -04:00
Joey Hess
c69d6eb035 Make annex.web-options be used in several places that call curl. 2014-02-24 21:29:37 -04:00
Joey Hess
46cc39f1a4 repair: Optimise unpacking of pack files, and avoid repeated error messages about corrupt pack files. 2014-02-24 19:36:58 -04:00
Joey Hess
d5a2b498f6 webdav: When built with DAV 0.6.0, use the new DAV monad to avoid locking files, which is not needed by git-annex's use of webdav, and does not work on Box.com. 2014-02-24 18:21:51 -04:00
Joey Hess
45e7040142 webapp: Fix creation of box.com, S3, and Glacier repositories, broken in 5.20140221. 2014-02-24 15:29:17 -04:00
Joey Hess
8d5158fa31 Preserve metadata when staging a new version of an annexed file.
Performance impact: When adding a large tree of new files, this needs
to do some git cat-file queries to check if any of the files already
existed and might need a metadata copy. I tried a benchmark in a copy
of my sound repository (so there was already a significant git tree
to check against.

Adding 10000 small files, with a cold cache:
  before: 1m48.539s
  after:  1m52.791s

So, impact is 0.0004 seconds per file added. Which seems acceptable, so did
not add some kind of configuration to enable/disable this.

This commit was sponsored by Lisa Feilen.
2014-02-24 14:41:33 -04:00
Joey Hess
fb4e1ebfbe metadata: Support --json 2014-02-23 13:58:16 -04:00
Joey Hess
b437787eee metadata: Field names limited to alphanumerics and a few whitelisted punctuation characters to avoid issues with views, etc. 2014-02-23 13:34:59 -04:00
Joey Hess
7498c5dd96 annex.genmetadata can be set to make git-annex automatically set metadata (year and month) when adding files 2014-02-23 00:08:29 -04:00
Joey Hess
079b35a1a8 views: add automatically constructed file location metadata
When constructing views, metadata is available about the location of the
file in the view's reference branch. Allows incorporating parts of the
directory hierarchy in a view.

For example `git annex view tag=* podcasts/=*` makes a view in the form
tag/showname.

Performance impact: I benchmarked git annex view tag=* in the conference
proceedings repo to take 6.459s before this change, and 6.544s after.

FWIW, I considered making the syntax for this be podcasts/*, which might
be easier for the user to learn. However, I think it's not as good:

* The user has to then juggle two different syntaxes, and podcasts/* will
  be expanded by the shell so they also need to quote it, while podcasts/=*
  is unlikely to be expanded by the shell.
* It would allow for things like podcasts/*/* and *.mp3 which do not
  map well into views.

This commit was sponsored by Aurélien Pinceaux.
2014-02-22 16:27:53 -04:00
Joey Hess
24f8136504 --metadata field=value can now use globs to match, and matches case insensatively, the same as git annex view field=value does.
Also refactored glob code into its own module.
2014-02-21 18:34:34 -04:00
Joey Hess
ded4ab5704 Fix handling of rsync remote urls containing a username, including rsync.net.
This breakage seems to have been caused way back in a1eded86,
but I am pretty sure rsync.net support has not been entirely
broken since last April. AFAICS, the generated .ssh/config
has not changed since then -- it has never included a Username setting
line. So, I am puzzled at when this reversion was introduced.

Note that the breakage only affected checkpresent and remove. Upload and
download use the ssh connection caching, which includes a -l username.
2014-02-21 13:20:57 -04:00
Joey Hess
1f6f034e90 prep release 2014-02-21 11:24:18 -04:00
Joey Hess
9edc3a735d fsck: Refuse to do anything if more than one of --incremental, --more, and --incremental-schedule are given, since it's not clear which option should win. 2014-02-20 15:56:45 -04:00
Joey Hess
7d288d83c9 glacier: Do not try to run glacier value create when an existing glacier remote is enabled. 2014-02-20 15:56:26 -04:00
Joey Hess
21610294da trust, untrust, semitrust, dead: Warn when the trust level is overridden in .git/config. 2014-02-20 15:17:39 -04:00
Joey Hess
134fdefb8c fsck: When run with --all or --unused, while .gitattributes annex.numcopies cannot be honored since it's operating on keys instead of files, make it honor the global numcopies setting, and the annex.numcopies git config setting. 2014-02-20 14:45:17 -04:00
Joey Hess
db48b8a4a3 unused: Fix to actually detect unused keys when in direct mode. 2014-02-20 13:53:49 -04:00
Joey Hess
dd7b99c860 add tip about metadata driven views (and more flexible view filtering)
While writing this documentation, I realized that there needed to be a way
to stay in a view like tag=* while adding a filter like tag=work that
applies to the same field.

So, there are really two ways a view can be refined. It can have a new
"field=explicitvalue" filter added to it, which does not change the
"shape" of the view, but narrows the files it shows.
Or, it can have a new view added, which adds another level of
subdirectories.

So, added a vfilter command, which takes explicit values to add to the
filter, and rejects changes that would change the shape of the view.

And, made vadd only accept changes that change the shape of the view.

And, changed the View data type slightly; now components that can match
multiple metadata values can be visible, or not visible.

This commit was sponsored by Stelian Iancu.
2014-02-19 16:29:56 -04:00
Joey Hess
39ebfa1a2e pre-commit: Update metadata when committing changes to annexed files within a view.
So the user can now switch to a view and then move files around within it
to manage metadata. For example, moving a file into a new directory
when in the tags=* view adds a tag to it.

Implementation is fairly efficient. One diff-index, which is no more
expensive than the first stage of a git commit, followed by possibly
some cat-file --batch traffic to find the key (when deleting a file).
Very similar to what's done in direct mode when committing. And like
direct mode when updating the WC after a merge, it has to buffer the
diff-tree values in order to make 2 passes over them.

When not in a view, pre-commit now does one extra git symbolic-ref,
which is tiny overhead.

This commit was sponsored by Andrew Eskridge.
2014-02-19 14:17:58 -04:00
Joey Hess
67a5f02a0b add vcycle command 2014-02-18 20:16:28 -04:00
Joey Hess
f603692a72 add vadd command 2014-02-18 20:02:09 -04:00
Joey Hess
67fd06af76 add git annex view command
(And a vpop command, which is still a bit buggy.)

Still need to do vadd and vrm, though this also adds their documentation.

Currently not very happy with the view log data serialization. I had to
lose the TDFA regexps temporarily, so I can have Read/Show instances of
View. I expect the view log format will change in some incompatable way
later, probably adding last known refs for the parent branch to View
or something like that.

Anyway, it basically works, although it's a bit slow looking up the
metadata. The actual git branch construction is about as fast as it can be
using the current git plumbing.

This commit was sponsored by Peter Hogg.
2014-02-18 18:22:20 -04:00
Joey Hess
fd09798e40 windows webapp: fix rsync.net support 2014-02-14 15:47:54 -04:00
Joey Hess
d007d1ac0c windows: hack to ensure HOME is always set 2014-02-14 14:03:24 -04:00
Joey Hess
2075cdeb59
limiting files based on metadata
Note that there is currently no caching, so
	--metadata foo=bar --metadata tag=blah
will currently read the log 2x per file.
2014-02-13 02:24:30 -04:00
Joey Hess
cf44fc1acb Windows webapp: Can create repos on removable drives. 2014-02-11 16:15:40 -04:00
Joey Hess
fa24ba2520 plumb creds from webapp to initremote
Avoids abusing setting environment variables, which was always a hack
and won't work on windows.
2014-02-11 14:07:56 -04:00
Joey Hess
e885080d06 Add progress display for transfers to/from external special remotes. 2014-02-10 21:33:22 -04:00
Joey Hess
b3a002f21d prep release 2014-02-10 12:59:18 -04:00
Joey Hess
c95d0cf7a8 Windows: Fix handling of absolute unix-style git repository paths.
Note that on Windows a remote with a path like /home/foo/bar
is interpreted by git as being some screwy relative path (relative to what
exactly seems ill-defined -- it seemed relative to C:\Program Files\Git\ in
my tests!) So no attempt has been made to handle such a path sanely, just not
to crash when encountering it.

Note that "C:\\foo" </> "/home/foo/bar" yields /home/foo/bar even though
that is not absolute! I don't know what to make of all this,
except that I will be very happy when this crock of **** vanishes from
the face of the earth.
2014-02-08 15:39:04 -04:00
Joey Hess
4e7c65dca0 Fix build on platforms not supporting the webapp. 2014-02-08 14:25:18 -04:00
Joey Hess
250df4685c avoid broken version of DAV 2014-02-07 17:42:52 -04:00
Joey Hess
3cbaa68be8 Android: Avoid crashing when unable to set file mode for ssh config file due to Android filesystem horribleness. 2014-02-07 14:57:23 -04:00
Joey Hess
3a3fda5bc0 Fix initremote with encryption=pubkey to work with S3, glacier, webdav, and external special remotes. 2014-02-06 18:25:31 -04:00
Joey Hess
897d877472 work around absNormPath not working on Windows
When making git-annex links, we want unix-style paths in the link targets.
2014-02-06 17:17:35 -04:00
Joey Hess
28cabd9909 Revert "work around absNormPath not working on Windows"
This reverts commit 0fc3ad82c5.

That caused 2 other test cases to fail. Windows path slash issues are
horrible.
2014-02-06 16:59:39 -04:00
Joey Hess
0fc3ad82c5 work around absNormPath not working on Windows
Seems I punted on this while porting before. This hack relies on DOS not
using / in filenames, it's effectively an alternate path separatr in at
least current versions of windows..
2014-02-06 15:06:45 -04:00
Joey Hess
a44e01c29c --in can now refer to files that were located in a repository at some past date. For example, --in="here@{yesterday}" 2014-02-06 12:43:56 -04:00
Joey Hess
751f496c11 add test case & fix conflict resolution bug on Windows & FAT
Fix bug in automatic merge conflict resolution code when used
on a filesystem not supporting symlinks, which resulted in it losing
track of the symlink bit of annexed files.

This was the underlying bug that was causing another test to fail,
which got worked around in 1c997fd08c.
I've chosen to keep 2 separate test cases since the old test case only
detected the problem accidentially.

Test suite passes on FAT & in windows, as well as on proper unix systems.

This commit was sponsored by Ellis Whitehead.
2014-02-04 17:24:12 -04:00
Joey Hess
1c997fd08c fix test suite to pass on windows
On windows, the sync of the second cloned repo to origin failed, because
synced/master was a non-fast-forward. This may be a bug of its own, but
it's not the issue that this test was intended to test, so disconnect
the repos from origin before syncing.
2014-02-03 12:12:50 -04:00
Joey Hess
29bb04aa0d Windows: Fix deletion of repositories by test suite and webapp.
On Windows, a file that is not writable cannot be deleted even if in a
directory with write perms. So git object files were not getting deleted
when removing a git repository.
2014-02-03 11:19:41 -04:00
Joey Hess
f657e4070b reorg 2014-02-03 10:45:28 -04:00
Joey Hess
fded408b44 sync --content: Drop files from remotes that don't have them after getting them.
Need to include the uuid of the local repo in the list of belived locations
of a key after getting it, in order for the drop from remote to include it
in the numcopies calculation.
2014-02-02 22:48:45 -04:00
Joey Hess
4676706756 sync --content: Reuse smart copy code from copy command, including handling and repairing out of date location tracking info. Closes: #737480 2014-02-02 19:57:22 -04:00
Joey Hess
1858c1f44a Document in man page that sshcaching uses ssh ControlMaster. Closes: #737476 2014-02-02 19:27:47 -04:00
Joey Hess
089c0109a2 Added ways to configure rsync options to be used only when uploading or downloading from a remote. Useful to eg limit upload bandwidth. 2014-02-02 16:06:34 -04:00
Joey Hess
15ac2ea4de sync --content: Re-pull from remotes after downloading content, since that can take a while and other changes may be pushed in the meantime. 2014-02-01 10:49:50 -04:00
Joey Hess
bbef0cddfd improve sync with xmpp and annex-ignore
* sync --content: Honor annex-ignore configuration.
* sync: Don't try to sync with xmpp remotes, which are only currently
  supported when using the assistant.
2014-02-01 10:33:55 -04:00
Joey Hess
1669e80e85 Windows: Avoid using unix-compat's rename, which refuses to rename directories.
Opened a bug about this: https://github.com/jystic/unix-compat/issues/10
2014-01-29 15:19:03 -04:00
Joey Hess
721cc0cd22 rework annexed object locking in direct mode & support Windows
Seems that locking of annexed objects when they're being dropped was broken
in direct mode:

* When taking the lock before dropping, it created the .git/annex/objects
  file, as an empty file. It seems that the dropping code deleted that,
  but that is not right, and for all I know could in some situation cause
  a corrupted object to leak out.
* When the lock was checked, it actually tried to open each direct mode
  file, and checked if it was locked. Not the same lock used above, and
  could also fail if some consumer of the file locked it.

Fixed this, and added windows support by switching direct mode to lock a
.lck file.
2014-01-28 16:43:11 -04:00
Joey Hess
891c85cd88 use locking on Windows
This is all the easy cases, where there was already a separate lock file.
2014-01-28 14:42:03 -04:00
Joey Hess
998d76ae04 Revert "temporarily revert tasty-rerun support for this release"
This reverts commit 8fcf041159.
2014-01-27 14:22:44 -04:00
Joey Hess
8fcf041159 temporarily revert tasty-rerun support for this release
revert c340d9506c

tasty-rerun is stuck in NEW in debian
2014-01-27 13:58:43 -04:00
Joey Hess
e0224f01c1 prep release 2014-01-27 13:44:12 -04:00
Joey Hess
ec7443eb06 All commands that support --all also support a --key option, which limits them to acting on a single key. 2014-01-26 14:59:47 -04:00
Joey Hess
85398d068e whereis: Support --all. 2014-01-26 14:26:32 -04:00
Joey Hess
78d0fd389e webapp: After upgrading a git repository to git-annex, fix bug that made it temporarily not be synced with. 2014-01-26 13:57:05 -04:00
Joey Hess
5fc2d760ea Optimise non-bare http remotes; no longer does a 404 to the wrong url every time before trying the right url. Needs annex-bare to be set to false, which is done when initially probing the uuid of a http remote. 2014-01-26 13:03:25 -04:00
Joey Hess
b93e485ef1 added annex.secure-erase-command config option. 2014-01-24 12:58:52 -04:00
Joey Hess
c340d9506c tasty-rerun! make rerest runs much much faster than running whole test suite 2014-01-24 12:21:30 -04:00
Joey Hess
3da0064657 assistant unused file handling
Make sanity checker run git annex unused daily, and queue up transfers
of unused files to any remotes that will have them. The transfer retrying
code works for us here, so eg when a backup disk remote is plugged in,
any transfers to it are done. Once the unused files reach a remote,
they'll be removed locally as unwanted.

If the setup does not cause unused files to go to a remote, they'll pile
up, and the sanity checker detects this using some heuristics that are
pretty good -- 1000 unused files, or 10% of disk used by unused files,
or more disk wasted by unused files than is left free. Once it detects
this, it pops up an alert in the webapp, with a button to take action.

TODO: Webapp UI to configure this, and also the ability to launch an
immediate cleanup of all unused files.

This commit was sponsored by Simon Michael.
2014-01-22 22:53:18 -04:00
Joey Hess
ed7c61914c assistant: Run the periodic git gc in batch mode. 2014-01-22 17:11:41 -04:00
Joey Hess
4b55afe9e9 add "unused" preferred content expression
With a really nice optimisation that keeps it from having any overhead
in normal operation!

This commit was sponsored by Ulises Vitulli.
2014-01-22 16:35:32 -04:00
Joey Hess
f2713a3bb9 benchmarked numcopies .gitattributes in preferred content
Checking .gitattributes adds a full minute to a git annex find looking for
files that don't have enough copies. 2:25 increasts to 3:27. I feel this is
too much of a slowdown to justify making it the default. So, exposed two
versions of the preferred content expression, a slow one and a fast but
approximate one.

I'm using the approximate one in the default preferred content expressions
to avoid slowing down the assistant.
2014-01-21 18:49:25 -04:00
Joey Hess
78ead70ea4 repair: Check git version at run time. 2014-01-21 13:22:48 -04:00
Joey Hess
3159da2693 Add and use numcopiesneeded preferred content expression.
* Add numcopiesneeded preferred content expression.
* Client, transfer, incremental backup, and archive repositories
  now want to get content that does not yet have enough copies.

This means the asssistant will make copies of files that don't yet
meet the configured numcopies, even to places that would not normally want
the file.

For example, if numcopies is 4, and there are 2 client repos and
2 transfer repos, and 2 removable backup drives, the file will be sent
to both transfer repos in order to make 4 copies. Once a removable drive
get a copy of the file, it will be dropped from one transfer repo or the
other (but not both).

Another example, numcopies is 3 and there is a client that has a backup
removable drive and two small archive repos. Normally once one of the small
archives has a file, it will not be put into the other one. But, to satisfy
numcopies, the assistant will duplicate it into the other small archive
too, if the backup repo is not available to receive the file.

I notice that these examples are fairly unlikely setups .. the old behavior
was not too bad, but it's nice to finally have it really correct.

.. Almost. I have skipped checking the annex.numcopies .gitattributes
out of fear it will be too slow.

This commit was sponsored by Florian Schlegel.
2014-01-20 17:35:29 -04:00
Joey Hess
d66535f065 global numcopies setting
* numcopies: New command, sets global numcopies value that is seen by all
  clones of a repository.
* The annex.numcopies git config setting is deprecated. Once the numcopies
  command is used to set the global number of copies, any annex.numcopies
  git configs will be ignored.
* assistant: Make the prefs page set the global numcopies.

This global numcopies setting is needed to let preferred content
expressions operate on numcopies.

It's also convenient, because typically if you want git-annex to preserve N
copies of files in a repo, you want it to do that no matter which repo it's
running in. Making it global avoids needing to warn the user about gotchas
involving inconsistent annex.numcopies settings.
(See changes to doc/numcopies.mdwn.)

Added a new variety of git-annex branch log file, that holds only 1 value.
Will probably be useful for other stuff later.

This commit was sponsored by Nicolas Pouillard.
2014-01-20 16:47:56 -04:00
Joey Hess
b6ba0bd556 sync --content: New option that makes the content of annexed files be transferred.
Similar to the assistant, this honors any configured preferred content
expressions.

I am not entirely happpy with the implementation. It would be nicer if
the seek function returned a list of actions which included the individual
file gets and copies and drops, rather than the current list of calls to
syncContent. This would allow getting rid of the somewhat reundant display
of "sync file [ok|failed]" after the get/put display.

But, do that, withFilesInGit would need to somehow be able to construct
such a mixed action list. And it would be less efficient than the current
implementation, which is able to reuse several values between eg get and
drop.

Note that currently this does not try to satisfy numcopies when
getting/putting files (numcopies are of course checked when dropping
files!) This makes it like the assistant, and unlike get --auto
and copy --auto, which do duplicate files when numcopies is not yet
satisfied. I don't know if this is the right decision; it only seemed to
make sense to have this parallel the assistant as far as possible to start
with, since I know the assistant works.

This commit was sponsored by Øyvind Andersen Holm.
2014-01-19 17:49:54 -04:00
Joey Hess
85185b8f50 Allow --all to be mixed with matching options like --copies and --in (but not --include and --exclude). 2014-01-18 14:58:56 -04:00
Joey Hess
2b1a7895fc list: Fix specifying of files to list. 2014-01-18 13:25:06 -04:00
Joey Hess
456c9eedb0 status: Support --json. 2014-01-18 12:05:10 -04:00
Joey Hess
1d90e72e91 Remove --json option from commands not supporting it. 2014-01-18 11:54:43 -04:00
Joey Hess
3cbb366ebc Really fix FTBFS on mipsel and sparc due to test suite not being available on those architectures. 2014-01-17 14:48:56 -04:00
Joey Hess
31b80e55f8 prep release 2014-01-16 11:38:16 -04:00
Joey Hess
4e19e87921 repair: Fix bug in packed refs file exploding code that caused a .gitrefs directory to be created instead of .git/refs 2014-01-15 16:34:18 -04:00
Joey Hess
daec7ffafe Fix FTBFS on mipsel and sparc due to test suite not being available on those architectures. 2014-01-15 12:49:56 -04:00
Joey Hess
18a3e51d52 assistant: Detect if .git/annex/index is corrupt at startup, and recover. 2014-01-14 17:10:30 -04:00
Joey Hess
d07f2d7865 Fix a long-standing bug that could cause the wrong index file to be used when committing to the git-annex branch, if GIT_INDEX_FILE is set in the environment. This typically resulted in git-annex branch log files being committed to the master branch and later showing up in the work tree. (These log files can be safely removed.) 2014-01-14 15:36:33 -04:00
Joey Hess
5e6e89f423 repair: Support old git versions from before git fsck --no-dangling was implemented. 2014-01-13 18:10:45 -04:00
Joey Hess
7ee87c7bd6 map: Fix display of v5 direct mode repos.
The direct mode guard confused map. So need to run through Annex.new to get
the actual path to the repo.
2014-01-13 15:36:02 -04:00
Joey Hess
5a5adc44f5 Refuse to build with git older than 1.7.1.1, which is needed for git checkout -B 2014-01-13 15:17:48 -04:00
Joey Hess
0cac4402ac Android: Avoid passing --clobber to busybox wget. 2014-01-13 14:52:49 -04:00
Joey Hess
c20f31a1ad add GETAVAILABILITY to external special remote protocol
And some reworking of types, and added an annex-availability git config
setting.
2014-01-13 14:41:10 -04:00
Joey Hess
57edce8ad9 external special remote protocol: Added GETGITDIR. 2014-01-13 14:00:09 -04:00
Joey Hess
85272d8a98 Added tahoe special remote.
Known problems:

1. Tries to tahoe start when daemon is already running.

2. If multiple tahoe remotes are set up on the same computer,
   they will have the same node.url configured by default,
   and this confuses tahoe commands.

This commit was sponsored by LeastAuthority.com
2014-01-08 16:14:41 -04:00
Joey Hess
5e23dfabd6 add DEBUG 2014-01-07 13:23:58 -04:00
Joey Hess
0a98f1be15 prep release 2014-01-07 12:25:12 -04:00
Joey Hess
1c02fc4987 no lsof on kfreebsd 2014-01-07 12:12:36 -04:00
Joey Hess
e5b4d447b6 assistant: Start a new git-annex transferkeys process after a network connection change
So that remotes that use a persistent network connection are restarted.

A remote might keep open a long duration network connection, and could
fail to deal well with losing the connection. This is particularly a
concern now that we have external special reotes. An external
special remote that is implemented naively might open the connection only
when PREPARE is sent, and if it loses connection, throw errors on each
request that is made.

(Note that the ssh connection caching should not have this problem; if the
long-duration ssh process loses connection, the named pipe is disconnected
and the next ssh attempt will reconnect. Also, XMPP already deals with
disconnection robustly in its own way.)

There's no way for git-annex to know if a lost network connection actually
affects a given remote, which might have a transfer in process. It does not
make sense to force kill the transferkeys process every time the NetWatcher
detects a change. (Especially because the NetWatcher sometimes polls 1
change per hour.)

In any case, the NetWatcher only detects connection to a network, not
disconnection. So if a transfer is in progress over the network, and the
network goes down, that will need to time out on its own.

An alternate approch that was considered is to use a separate transferkeys
process for each remote, and detect when a request fails, and assume that
means that process is in a failing state and restart it. The problem with
that approach is that if a resource is not available and a remote fails
every time, it degrades to starting a new transferkeys process for every
file transfer, which is too expensive.

Instead, this commit only handles the network reconnection case, and restarts
transferkeys only once the network has reconnected and another transfer needs
to be made. So, a transferkeys process will be reused for 1 hour, or until the
next network connection.

----

The NotificationBroadcaster was rewritten to use TMVars rather than MSampleVars,
to allow checking without blocking if a notification has been received.

----

This commit was sponsored by Tobias Brunner.
2014-01-06 16:03:39 -04:00
Joey Hess
b92b54bd42 assistant: Fixed several minor memory leaks that manifested when adding a large number of files. 2014-01-05 21:30:48 -04:00
Joey Hess
0cc1bd7e53 add: Fix rollback when disk is completely full.
Noticed that it was possible for add to move a file to .git/annex/objects
and not make the link if the disk was full. This happened because the
location log update failed, and so addLink never got a chance to run.
Running addLink first fixes it; on error it will unwind by moving the file
back to where it was originally.
2014-01-05 14:09:57 -04:00
Joey Hess
f9e7b6cf61 addurl, importfeed: Honor annex.diskreserve as long as the size of the url can be checked.
This adds a http HEAD before the download is done. That was already the
case when the assistant was running, and it seems worth it to avoid filling
up the whole disk, like happened to my server today.
2014-01-04 15:08:06 -04:00
Joey Hess
fdcc04096c assistant: Ensure that .ssh/config and .ssh/authorized_keys are not group or world writable when writing to those files, as that can make ssh refuse to use them, if it allows another user to write to them. 2014-01-03 17:44:12 -04:00
Joey Hess
3e68c1c2fd add remote state logs
This allows a remote to store a piece of arbitrary state associated with a
key. This is needed to support Tahoe, where the file-cap is calculated from
the data stored in it, and used to retrieve a key later. Glacier also would
be much improved by using this.

GETSTATE and SETSTATE are added to the external special remote protocol.

Note that the state is left as-is even when a key is removed from a remote.
It's up to the remote to decide when it wants to clear the state.

The remote state log, $KEY.log.rmt, is a UUID-based log. However,
rather than using the old UUID-based log format, I created a new variant
of that format. The new varient is more space efficient (since it lacks the
"timestamp=" hack, and easier to parse (and the parser doesn't mess with
whitespace in the value), and avoids compatability cruft in the old one.

This seemed worth cleaning up for these new files, since there could be a
lot of them, while before UUID-based logs were only used for a few log
files at the top of the git-annex branch. The transition code has also
been updated to handle these new UUID-based logs.

This commit was sponsored by Daniel Hofer.
2014-01-03 16:35:57 -04:00
Joey Hess
3560fb411d wanted, schedule: Avoid printing "ok" after requested value. 2014-01-03 14:51:32 -04:00
Joey Hess
f7727d2df1 Remotes can now be made read-only, by setting remote.<name>.annex-readonly 2014-01-02 13:12:32 -04:00
Joey Hess
f83e5c75dc Assistant: Remove stale MERGE_HEAD files in lockfile cleanup.
See http://git-annex.branchable.com/forum/How_to_resolve_a_interrupted_merge_in_direct_mode__63__/
2014-01-01 22:05:33 -04:00
Joey Hess
858eb26303 Avoid looping if long-running git cat-file or git hash-object crashes and keeps crashing when restarted. 2014-01-01 21:42:25 -04:00
Joey Hess
8e3032df2d added GETWANTED, SETWANTED for Tobias's flickr remote
This was unexpectedly difficult because of a depdenency cycle. To parse a
preferred content expression involves several things that need to operate
on the list of remotes. Which needs Remote.External. The only way to avoid
this cycle (I tried breaking it at several points) was to skip parsing the
expression in SETWANTED.

That's sorta ok, because git-annex already has to deal with unparsable
preferred content expressions being stored, in order to handle eg,
upgrades. But I'm still not very happy that I cannot check it.

I feel this is a strong indication that I need to beware of further
bloating the special remote protocol interface.
2014-01-01 20:12:20 -04:00
Joey Hess
079f463d51 mirror: Support --all (and --unused). 2014-01-01 17:39:33 -04:00
Joey Hess
fab7adb161 Windows: Avoid eating stdin when running ssh to add a authorized key, since this is used for password prompting. 2014-01-01 15:49:51 -04:00
Joey Hess
49aad120b9 Windows: Fix bug in direct mode merge code that could cause files in subdirectories to go missing. 2013-12-31 16:39:11 -04:00
Joey Hess
ed1fcab6d7 external special remote protocol: Added GETUUID. 2013-12-31 13:50:18 -04:00
Joey Hess
515e2fef54 prep release 2013-12-30 14:20:55 -04:00
Joey Hess
d6d5b0a6d8 Android: Avoid trying to use Android's own ionice, which does not allow specifying a command to run. Fixes transferring files to/from android and probably a few other things. 2013-12-29 17:32:08 -04:00
Joey Hess
81f498559a importfeed: Support youtube playlists. 2013-12-29 15:52:20 -04:00
Joey Hess
b1d7474c1d Auto-upgrade v3 indirect repos to v5 with no changes. This also fixes a problem when a direct mode repo was somehow set to v3 rather than v4, and so the automatic direct mode upgrade to v5 was not done. 2013-12-29 13:06:23 -04:00
Joey Hess
7f6685c16e addurl, importfeed: Sanitize | and some other symbols and special characters. 2013-12-27 17:52:20 -04:00
Joey Hess
307c57b29b add git-shell wrappers 2013-12-27 16:06:11 -04:00
Joey Hess
5972ee50fa external special remotes working 2013-12-27 14:13:52 -04:00
Joey Hess
706c74aa98 Include git-receive-pack, git-upload-pack, and git wrappers in the Linux standalone build, and OSX app, so they will be available when it's added to PATH. 2013-12-24 16:28:10 -04:00
Joey Hess
02df4f529b Fix bug in Linux standalone build's shimming that broke git-annex-shell. 2013-12-24 15:42:49 -04:00
Joey Hess
7e311a00d0 Fix typo in test suite. 2013-12-24 14:02:02 -04:00
Joey Hess
728c00b0c2 Add tasty to build-depends, so that test suite builds again. (tasty was stuck in incoming.) 2013-12-24 13:58:50 -04:00
Joey Hess
0e47d6ba97 prep release 2013-12-21 12:00:47 -04:00
Joey Hess
67e7c7c4bb reorder 2013-12-20 21:00:02 -04:00
Joey Hess
3a6e0d1215 assistant: Set StrictHostKeyChecking yes when creating ssh remotes, and add it to the configuration for any ssh remotes previously created by the assistant. This avoids repeated prompts by ssh if the host key changes, instead syncing with such a remote will fail. Closes: #732602 2013-12-20 20:58:36 -04:00
Joey Hess
c99d6a8151 assistant: Fix OSX-specific bug that caused the startup scan to try to follow symlinks to other directories, and add their contents to the annex. 2013-12-18 15:05:29 -04:00
Joey Hess
58c7b0a56d assistant: Always batch changes found in startup scan.
Batch detection is heuristic, so can sometimes fail. I observed one such
failure while starting up in a repository with 87000 files. After the first
several batches of ~5000 files, it fell out of batch mode, and never
re-entered it, and so made many more commits of a few files at a time
than necessary.

So, let's always use batch mode when in the startup scan. This avoids the
heuristic there, at least.

There is clearly also room to improve the heuristic. Possibly 10 files is
too high a bar to be found during a commit, on a system that can commit
quickly.
2013-12-16 16:16:19 -04:00
Joey Hess
99f6dd01b4 Linux standalone build now includes its own glibc and forces the linker to use it, to remove dependence on the host glibc. 2013-12-16 01:51:19 -04:00
Joey Hess
f4e0eec2a2 Include man pages in Linux and OSX standalone builds. 2013-12-15 16:27:46 -04:00
Joey Hess
6be19b0070 Programs from Linux and OSX standalone builds can now be symlinked into a directory in PATH as an alternative installation method, and will use readlink to find where the build was unpacked. 2013-12-15 15:57:41 -04:00
Joey Hess
2b5b4dcd78 Add plumbing-level lookupkey examinekey command.
find --format: Added hashdirlower, hashdirmixed, keyname, and mtime format
variables.
2013-12-15 14:52:09 -04:00
Joey Hess
7d5b25515c Add plumbing-level lookupkey command. 2013-12-15 14:02:23 -04:00
Joey Hess
cee4c9a11d Fix test suite to cover lock --force change. 2013-12-15 13:33:09 -04:00
Joey Hess
d7ee0bdbb8 OSX: Remove ssh and ssh-keygen from dmg as they're included in OSX by default. 2013-12-13 14:25:24 -04:00
Joey Hess
bef567c31f Fix direct mode's handling when modifications to non-annexed files are pulled from a remote. A bug prevented the files from being updated in the work tree, and this caused the modification to be reverted. 2013-12-12 15:57:09 -04:00
Joey Hess
625076f9a5 status: Ignore new files that are gitignored. 2013-12-12 14:01:24 -04:00
Joey Hess
e6c4f550d8 repair: Remove damaged git-annex sync branches. 2013-12-10 16:17:49 -04:00
Joey Hess
ce045a51af Improve repair of git-annex index file.
Fixes a test case I received where a corrupted repo was repaired, but the
git-annex branch was not. The root of the problem was that the
MissingObject returned by the repair code was not necessarily a complete
set of all objects that might have been deleted during the repair.

So, stop trying to return that at all, and instead make the index file
checking code explicitly verify that each object the index uses is present.
2013-12-10 15:40:01 -04:00
Joey Hess
063a183a61 windows disk free space checking 2013-12-10 01:18:04 -04:00
Joey Hess
4a5ab9b1e7 Tweak magic number to fix bad behavior in Firefox, which was caused by an earlier fix to bad behavior in Chromium.
Browsers are crap.
2013-12-09 17:44:45 -04:00
Joey Hess
016f1778f6 changelog 2013-12-09 14:43:38 -04:00
Joey Hess
9f68bb546c better handling of overwriting an existing file/directory/broken link when importing
Previous test did not notice if there is a dangling symlink.

Also, if a directory exists with the same name as the imported file, that
cannot work, so don't let --force have an effect.
2013-12-09 13:43:47 -04:00
Joey Hess
b9dc38c24c add bug number 2013-12-07 10:53:19 -04:00
Joey Hess
cde099fe80 lock: Require --force. 2013-12-05 16:05:07 -04:00
Joey Hess
8ef79c1f83 windows wtf how did that work moment 2013-12-04 17:39:58 -04:00
Joey Hess
64160a9679 import: Add --skip-duplicates option.
Note that the hash backends were made to stop printing a (checksum..)
message as part of this, since it showed up without a file when deciding
whether to act on a file. Should have probably removed that message a while
ago anyway, I suppose.
2013-12-04 13:13:30 -04:00
Joey Hess
b2e9339b57 Android: Fix SRV record lookups for XMPP to use android getprop command to find DNS server, since there is no resolv.conf. 2013-12-03 13:14:49 -04:00
Joey Hess
e425a966ed Deal with box.com changing the url of their webdav endpoint.
Use new url when making new remotes.

Transparently rewrite old url to new for existing remotes.
2013-12-02 16:01:20 -04:00
Joey Hess
66285ca3d1 copy --from, get --from: When --force is used, ignore the location log and always try to get the file from the remote. 2013-12-02 15:41:20 -04:00
Joey Hess
0a63ed563f rsync special remote: Fix fallback mode for rsync remotes that use hashDirMixed. Closes: #731142 2013-12-02 12:53:39 -04:00
Joey Hess
dcf033ebc0 Automatically fix up bad bare repositories created by versions 5.20131118 through 5.20131127. 2013-12-02 12:34:16 -04:00
Joey Hess
2711d13d55 assistant: Run transferkeys as batch jobs. 2013-12-01 14:56:37 -04:00
Joey Hess
4882a611e5 assistant: Batch jobs are now run with ionice and nocache, when those commands are available. 2013-12-01 14:53:15 -04:00
Joey Hess
03932212ec Avoid using git commit in direct mode, since in some situations it will read the full contents of files in the tree.
The assistant's commit code also always avoids git commit, for simplicity.
Indirect mode sync still does a git commit -a to catch unstaged changes.

Note that this means that direct mode sync no longer runs the pre-commit
hook or any other hooks git commit might call. The git annex pre-commit
hook action for direct mode is however explicitly run. (The assistant
already ran git commit with hooks disabled, so no change there.)
2013-12-01 13:59:45 -04:00
Joey Hess
4249c85ece prep release 2013-11-30 16:33:03 -04:00
Joey Hess
b1f678b8e5 init: Fix a bug that caused git annex init, when run in a bare repository, to set core.bare=false. 2013-11-30 16:12:20 -04:00
Joey Hess
6b54bca5f7 debian specific upload 2013-11-28 07:58:19 -04:00
Joey Hess
6896db17ae prep release 2013-11-27 18:47:37 -04:00
Joey Hess
c981b2dc3c Allow use of --unused in bare repository. 2013-11-27 06:50:20 -04:00
Joey Hess
0fc2fae8a0 update 2013-11-26 19:47:08 -04:00
Joey Hess
0bea8a4c55 reinject: Allow to be used in direct mode. 2013-11-26 16:15:49 -04:00
Joey Hess
0995c440da update 2013-11-26 15:23:39 -04:00
Joey Hess
1e515b76b3 2 android bug fixes 2013-11-26 13:24:24 -04:00
Joey Hess
3e9db00d2d Bug fix: annex.version did not get set on automatic upgrade to v5 direct mode repo, so the upgrade was performed repeatedly, slowing commands down. 2013-11-26 12:54:50 -04:00
Joey Hess
87c75417ac OSX upgrades seem to be working now 2013-11-25 14:06:34 -04:00
Joey Hess
e2f50f5110 Added support for quvi 0.9. Slightly suboptimal due to limitations in its interface compared with the old version. 2013-11-24 23:44:30 -04:00
Joey Hess
0980f3dae6 Fix bug that broke switching between local repositories in the webapp when they use the new guarded direct mode.
git treats eg ~/annex as a bare git repository located in ~/.annex/.git
if ~/annex/.git/config has core.bare=true.
2013-11-22 23:27:15 -04:00
Joey Hess
766c31c95c watch git-annex program file to detect upgrades
Not yet wired up to restart the assistant on upgrade; that needs careful
sanity checking to wait until the upgrade is done before restarting.

Used the DirWatcher here, so it gets events for any changes to the
directory containing the program file. (But not subdirs.) This is necessary
in order to detect when the file is renamed as part of the upgrade, which
an inotify on a single file would not detect. (Also, I have DirWatcher code,
but not FileWatcher code.)

Note that upgrades that remove or rename a whole directory tree containing
the executable will *not* trigger this code. So eg, deleting and replacing
the whole standalone tarball dir tree won't work -- but untarring it
over top will. So should dpkg package upgrades.

Added programPath, using a new GHC feature to find the full path to the
executable. The fallback code for old GHC or unsupported OS is less good;
its worst failure mode would be either failing to find the program, and so
not checking for upgrades, or finding a git-annex that's in PATH, but is
not the one running.

This commit was sponsored by John Roepke.
2013-11-22 18:46:45 -04:00
Joey Hess
be069bd962 update 2013-11-22 15:44:39 -04:00
Joey Hess
6d23786d96 Avoid misbehavior when addurl is used with quvi 0.9.
In 0.9, -v shows version, rather than controlling verbosity.

Still need to port to 0.9, this just avoids massively confusing addurl when
quvi prints its version and exits successfully, on urls that it cannot be
used with.
2013-11-22 14:12:44 -04:00
Joey Hess
7dbb702edd merge from git-repair 2013-11-20 18:31:00 -04:00
Joey Hess
e9b88f8db1 releasing package git-annex version 5.20131120 2013-11-20 13:10:11 -04:00
Joey Hess
ef2d3a7999 changelog 2013-11-19 17:18:52 -04:00
Joey Hess
b876df6fdb Ensure that core.sharedrepository is honored when creating the .git/annex directory. 2013-11-18 18:20:20 -04:00
Joey Hess
310c549b5a Ensure execute bit is set on directories when core.sharedrepsitory is set. 2013-11-18 18:13:09 -04:00
Joey Hess
0d0e21ea57 dropunused, addunused: Allow "all" instead of a range to act on all unused data. 2013-11-18 17:24:18 -04:00
Joey Hess
187b844b1e releasing package git-annex version 5.20131118 2013-11-18 11:01:00 -04:00
Joey Hess
9c20185f55 webapp: Check annex.version. 2013-11-17 14:58:35 -04:00
Joey Hess
f35cc2d4ba Android: Adjust default .gitignore to ignore .thumbnails at any location in the tree, not just at its top. 2013-11-16 18:48:16 -04:00
Joey Hess
493a989d06 Switched to the tasty test framework. 2013-11-15 16:02:12 -04:00
Joey Hess
c20f3c3cba update 2013-11-15 14:52:39 -04:00
Joey Hess
d48b00ebed Direct mode .git/annex/objects directories are no longer left writable
Because that allowed writing to symlinks of files that are not present,
which followed the link and put bad content in an object location.

fsck: Fix up .git/annex/object directory permissions.

This commit was sponsored by an anonymous bitcoin donor.
2013-11-15 14:52:03 -04:00
Joey Hess
b0f85b3e22 Fix direct mode merge bug when a direct mode file was deleted and replaced with a directory. An ordering problem caused the directory to not get created in this case. Thanks to Tim for the test cases. 2013-11-15 13:40:12 -04:00
Joey Hess
2a297dd6d1 on second thought, don't change sync to exit nonzero on successful conflicted merge resolution
For one thing, that breaks the test suite. May revisit later.
2013-11-14 14:36:48 -04:00
Joey Hess
13108b7196 assistant: Notice on startup when the index file is corrupt, and auto-repair. 2013-11-13 14:27:17 -04:00
Joey Hess
5e7e0c7dc0 repair: Handle case where index file is corrupt, but all objects are ok. 2013-11-13 13:41:02 -04:00
Joey Hess
16fa980689 separate android 4.0 and 4.3 builds needed
Also, parameterize the abdroid abi version
2013-11-12 14:24:53 -04:00
Joey Hess
46cf00ffd8 Fix bug that caused bad information to be written to the git-annex branch when running describe or other commands with a remote that has no uuid.
Still need to fix crash caused by the bad info.
2013-11-09 13:37:30 -04:00
Joey Hess
f3c714293a fixup 2013-11-08 17:04:36 -04:00
Joey Hess
28a64c8fd8 Include ssh-keygen in standalone bundle. 2013-11-08 14:29:47 -04:00
Joey Hess
958312885f webapp: Improve UI around remote that have no annex.uuid set, either because setup of them is incomplete, or because the remote git repository is not a git-annex repository.
Complicated by such repositories potentially being repos that should have
an annex.uuid, but it failed to be gotten, perhaps due to the past ssh repo
setup bugs. This is handled now by an Upgrade Repository button.
2013-11-07 18:02:00 -04:00
Joey Hess
b7c15f3b60 webapp: Avoid encoding problems when displaying the daemon log file. 2013-11-07 15:29:20 -04:00
Joey Hess
9ff229a798 watcher: Avoid loop when adding a file owned by someone else fails in indirect mode because its permissions cannot be modified.
Adding the file moved it to the annex, and then tried to set the mode.
Error unwind then moved the file back, and so the watcher saw the file get
deleted and then added back, and so tried again..
2013-11-07 15:18:54 -04:00
Joey Hess
4f373503f2 sync: When there are merge conflicts that get automatically resolved, exit nonzero at the end. 2013-11-07 15:02:11 -04:00
Joey Hess
d99bdbbb84 Merge branch 'directguard' 2013-11-07 14:12:13 -04:00
Joey Hess
eed2ed4fdb rename status to info, and update docs 2013-11-07 12:45:59 -04:00
Joey Hess
691850ca39 Allow optionally configuring git-annex with -fEKG to enable awesome remote monitoring interfaceat http://localhost:4242/ 2013-11-06 16:33:45 -04:00
Joey Hess
4f3f918abe fix merge 2013-11-06 13:03:23 -04:00
Joey Hess
00c91816fb Merge branch 'master' into directguard 2013-11-06 13:02:35 -04:00
Joey Hess
ee23be55fd Fix exception handling bug that could cause .git/annex/index to be used for git commits outside the git-annex branch. Known to affect git-annex when used with the git shipped with Ubuntu 13.10. 2013-11-06 12:21:50 -04:00
Joey Hess
a74018ea98 prep release 2013-11-06 11:37:06 -04:00
Joey Hess
4510819215 v5 for direct mode, with automatic upgrade
This includes storing the current state of the HEAD ref, which git annex
sync is going to need, but does not make sync use it.
2013-11-05 17:05:03 -04:00
Joey Hess
04768e44b2 automatically set and unset core.bare when switching to/from direct mode 2013-11-05 15:41:24 -04:00
Joey Hess
0e31234e8e support direct mode repositories with core.bare=true (not yet default)
Direct mode repositories can now have core.bare=true set, to prevent
accidentally running git commands that try to operate on the work tree,
and so do the wrong thing.

This is not yet the default, and it causes known problems for git-annex sync
due to receive.denyCurrentBranch not working in bare repositories.

This commit was sponsored by Richard Hartmann.
2013-11-05 14:24:28 -04:00
Joey Hess
c2862d9585 pass -c option on to all git commands run
The -c option now not only modifies the git configuration seen by
git-annex, but it is passed along to every git command git-annex runs.

This was easy to plumb through because gitCommandLine is already used to
construct every git command line, to add --git-dir and --work-tree
2013-11-05 13:38:37 -04:00
Joey Hess
58db042033 map: Work when there are gcrypt remotes. 2013-11-04 14:14:44 -04:00
Joey Hess
1f39aef893 Fix zombie process that occurred when switching between repository views in the webapp. 2013-11-02 22:25:08 -04:00
Joey Hess
dff303aa43 Fix enabling of gcrypt repository accessed over ssh; git-annex-shell gcryptsetup had a bug that caused it to fail with permission denied. 2013-11-02 20:15:40 -04:00
Joey Hess
7be69a2491 gcrypt, bup: Fix bug that prevented using these special remotes with encryption=pubkey.
I think both of these are all that's affected, but I went ahead and fixed
all the remotes that set their config to M.empty to instead store the
actual config. Who knows what will expect it to be actually present in
future, the Remote instance of getGpgEncParams came to..
2013-11-02 16:37:28 -04:00
Joey Hess
bc18cde325 sync: Work even when the local git repository is new and empty, with no master branch. 2013-11-02 15:29:38 -04:00
Joey Hess
7e7e765cba Improve local pairing behavior when two computers both try to start the pairing process separately.
I was able to reproduce something very like this bug by starting
pairing separately on both computers under poor network conditions (ie,
weak wifi on my front porch). Neither computer showed an alert for the
PairReq messages it was seeing (intermittently) from the other.

So, I've made a new PairReq message that has not been seen before
always make the alert pop up, even if the assistant thinks it is
in the middle of its own pairing process (or even another pairing
process with a different box on the LAN).

(This shouldn't cause a rogue PairAck to disrupt a pairing process part
way through.)
2013-11-02 15:10:29 -04:00
Joey Hess
3b76a141ea prep release 2013-11-01 11:57:47 -04:00
Joey Hess
0eff0dd910 unannex: New, much slower, but more safe behavior
Copies files out of the annex. This avoids an unannex of one file breaking
other files that link to the same content. Also, it means that the content
remains in the annex using up space until cleaned up with  "git annex
unused".

(The behavior of unannex --fast has not changed; it still hard
links to content in the annex. --fast was not made the default because it
is potentially unsafe; editing such a hard linked file can unexpectedly
change content stored in the annex.)
2013-10-28 16:56:01 -04:00
Joey Hess
230bfa9688 add --want-get and --want-drop options
New --want-get and --want-drop options which can be used to test preferred
content settings. For example, "git annex find --in . --want-drop"
2013-10-28 14:50:17 -04:00
Joey Hess
afddbfd7e9 The "git annex content" command is renamed to "git annex wanted". 2013-10-28 14:08:38 -04:00
Joey Hess
780a24374f add: Fix reversion in 4.20130827 when adding unlocked files that have not yet been committed.
catKeyFileHEAD is still checked too, because when doing a git commit with
unlocked files, the file gets staged to the index, so is not typechanged
there.

(This is also why git annex add foo; git annex unlock foo; git commit -a
does not re-annex foo, because there is no indication left that it was
added.)
2013-10-28 13:46:26 -04:00
Joey Hess
7ed8e87a34 assistant: Support repairing git remotes that are locally accessible
(eg, on removable drives)

gcrypt remotes are not yet handled.

This commit was sponsored by Sören Brunk.
2013-10-27 15:38:59 -04:00
Joey Hess
b48aaa22d0 assistant: Automatically repair damanged git repository, if it can be done without losing data. 2013-10-26 17:16:29 -04:00
Joey Hess
bcd77e65c2 changelog 2013-10-26 16:12:36 -04:00
Joey Hess
5756636486 directory, webdav: Fix bug introduced in version 4.20131002 that caused the chunkcount file to not be written. Work around repositories without such a file, so files can still be retreived from them. 2013-10-26 15:03:12 -04:00
Joey Hess
0dfe604ddc webapp: When setting up a bare shared repository, enable non-fast-forward pushes. 2013-10-26 13:06:43 -04:00
Joey Hess
2233ddd5a2 assistant: When autostarted, wait 5 seconds before running the startup scan, to avoid contending with the user's desktop login process. 2013-10-26 12:42:58 -04:00
Joey Hess
f51327f44e releasing package git-annex version 4.20131024 2013-10-24 13:14:54 -04:00
Joey Hess
e32b62b50e update 2013-10-23 15:05:57 -04:00
Joey Hess
d5eb85acf4 add repair command 2013-10-23 12:21:59 -04:00
Joey Hess
00932eda06 webapp: Fix bug when adding a remote and git-remote-gcrypt is not installed. 2013-10-22 13:32:10 -04:00
Joey Hess
b7800eab24 webapp: Move sidebar to the right hand side of the screen. 2013-10-21 18:05:52 -04:00
Joey Hess
4f871f89ba git-recover-repository 1/2 done 2013-10-20 17:50:51 -04:00
Joey Hess
f482de1b76 remove workaround for bug in git 1.8.4r0 2013-10-20 15:23:06 -04:00
Joey Hess
e93206e294 Windows: Deal with strange msysgit 1.8.4 behavior of not understanding DOS formatted paths for --git-dir and --work-tree. 2013-10-17 19:35:57 -04:00
Joey Hess
19816bca41 update for DiffTree type change (which fixes assistant in subdir confusion bug) 2013-10-17 15:11:21 -04:00
Joey Hess
c76c94a0da S3: Try to ensure bucket name is valid for archive.org. 2013-10-16 16:35:47 -04:00
Joey Hess
e227e8f683 sync: Fix automatic resolution of merge conflicts where one side is an annexed file, and the other side is a non-annexed file, or a directory.
Note that this case is only fully automatically resolved in direct mode.
In indirect mode, git merge moves the file to file~HEAD, and replaces it
with the directory, and leaves the file in unmerged state, and sync doesn't
yet change that.
2013-10-16 14:56:40 -04:00
Joey Hess
ecb4a30548 Work around sed output difference that led to version containing a newline on OSX. 2013-10-16 10:28:13 -04:00
Joey Hess
bac078742d Deal with git check-attr -z output format change in git 1.8.5.
I have not actually tested with 1.8.5, which is not yet relesaed, but
git.git commit f7cd8c50b9ab83e084e8f52653ecc8d90665eef2 changes -z
to also apply to output, without regards to back-compat. (But with pretty
good reasons.)

New code should work with both versions, by fingerprinting for NULs and
newlines.
2013-10-15 16:05:27 -04:00
Joey Hess
296e21b381 add schedule command
Mostly because it gives me an excuse and a hook to document the schedule
expression format.
2013-10-13 15:40:38 -04:00
Joey Hess
68518a9b3d status: Fix a crash if a temp file went away while its size was being checked for status. 2013-10-13 13:30:24 -04:00
Joey Hess
747f5b123c url size fixes
addurl: Improve message when adding url with wrong size to existing file.
Before the message suggested the url didn't exist.

Fixed handling of URL keys that have no recorded size. Before, if the key
has no size, the url also had to not declare any size, which was unlikely
and wrong, or it was taken to not exist. This probably would mostly affect
keys that were added to the annex with addurl --relaxed.
2013-10-11 13:05:00 -04:00
Joey Hess
2943592f51 Remove bogus runshell loop check.
git-annex.linux/git-annex can legitimately try to run itself -- this
happens when the programfile is used. So this check was bogus.
2013-10-11 01:24:13 -04:00
Joey Hess
45aed381df import: Skip .git directories. 2013-10-07 13:03:05 -04:00
Joey Hess
1200788859 status: Fix space leak in local mode, introduced in version 4.20130920.
Actually fixed 2 leaks, the tuple leak may have been older.
2013-10-07 03:59:14 -04:00
Joey Hess
6f38426cb8 work around ssh brain-damange
The control socket path passed to ssh needs to be 17 characters shorter
than the maximum unix domain socket length, because ssh appends stuff to it
to make a temporary filename. Closes: #725512

Also, take the shorter of the relative and the absolute paths to the
socket. Typically the relative path will be a lot shorter (unless
deep inside a subdirectory of the repository), and so using it will
avoid flirting with the maximum safe socket lenghts in more situations,
and so lead to less breakage if all my attempts at fixing this are
still buggy.
2013-10-06 20:59:36 -04:00
Joey Hess
635c9a1549 assistant: Detect stale git lock files at startup time, and remove them.
Extends the index.lock handling to other git lock files. I surveyed
all lock files used by git, and found more than I expected. All are
handled the same in git; it leaves them open while doing the operation,
possibly writing the new file content to the lock file, and then closes
them when done.

The gc.pid file is excluded because it won't affect the normal operation
of the assistant, and waiting for a gc to finish on startup wouldn't be
good.

All threads except the webapp thread wait on the new startup sanity checker
thread to complete, so they won't try to do things with git that fail
due to stale lock files. The webapp thread mostly avoids doing that kind of
thing itself. A few configurators might fail on lock files, but only if the
user is explicitly trying to run them. The webapp needs to start
immediately when the user has opened it, even if there are stale lock
files.

Arranging for the threads to wait on the startup sanity checker was a bit
of a bear. Have to get all the NotificationHandles set up before the
startup sanity checker runs, or they won't see its signal. Perhaps
the NotificationBroadcaster is not the best interface to have used for
this. Oh well, it works.

This commit was sponsored by Michael Jakl
2013-10-05 17:04:21 -04:00
Joey Hess
1be4d281d6 Better sanitization of problem characters when generating URL and WORM keys.
FAT has a lot of characters it does not allow in filenames, like ? and *
It's probably the worst offender, but other filesystems also have
limitiations.

In 2011, I made keyFile escape : to handle FAT, but missed the other
characters. It also turns out that when I did that, I was also living
dangerously; any existing keys that contained a : had their object
location change. Oops.

So, adding new characters to escape to keyFile is out. Well, it would be
possible to make keyFile behave differently on a per-filesystem basis, but
this would be a real nightmare to get right. Consider that a rsync special
remote uses keyFile to determine the filenames to use, and we don't know
the underlying filesystem on the rsync server..

Instead, I have gone for a solution that is backwards compatable and
simple. Its only downside is that already generated URL and WORM keys
might not be able to be stored on FAT or some other filesystem that
dislikes a character used in the key. (In this case, the user can just
migrate the problem keys to a checksumming backend. If this became a big
problem, fsck could be made to detect these and suggest a migration.)

Going forward, new keys that are created will escape all characters that
are likely to cause problems. And if some filesystem comes along that's
even worse than FAT (seems unlikely, but here it is 2013, and people are
still using FAT!), additional characters can be added to the set that are
escaped without difficulty.

(Also, made WORM limit the part of the filename that is embedded in the key,
to deal with filesystem filename length limits. This could have already
been a problem, but is more likely now, since the escaping of the filename
can make it longer.)

This commit was sponsored by Ian Downes
2013-10-05 15:01:49 -04:00
Joey Hess
478eeea02e addurl: Better sanitization of generated filenames.
Use sanitizeFilePath rather than rolling our own sanitizer.
2013-10-05 13:30:13 -04:00
Joey Hess
49ccf56d55 add back 2013-10-04 13:09:36 -04:00
Joey Hess
3d5fe9b794 add news item for git-annex 4.20131002 2013-10-04 13:09:23 -04:00
Joey Hess
93dbb7842e watcher: Detect at startup time when there is a stale .git/lock, and remove it so it does not interfere with the automatic commits of changed files. 2013-10-03 16:57:21 -04:00