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43967 commits

Author SHA1 Message Date
Joey Hess
7d67229884
git-annex log --gnuplot
The gnuplot output is pretty good, but could still be improved with:

* more colors (repeating colors is confusing with a lot of repos)
* better positioning of the legend, making the plot wider and moving it
  from over top of the graph

Sponsored-by: Kevin Mueller on Patreon
2023-11-14 14:56:58 -04:00
Joey Hess
0fdc1a54db
git-annex log --received modifier option
Only counting received and not dropped makes this show the bandwidth of
data coming into the repository, although only in a sense. Since
git-annex branch updates only happen at the end of a command, and we
don't know when a command started, it's only an approximation of the
actual bandwidth. (A previous git-annex branch update made have
happened in a different repository.)

It would be possible to also add a --dropped option, but I don't know
how useful that would be?

Sponsored-by: Nicholas Golder-Manning on Patreon
2023-11-14 14:04:46 -04:00
Joey Hess
21e66ce209
rename --when to --interval
More accurately describes its behavior.
2023-11-14 11:45:16 -04:00
Joey Hess
1ddec09f7c
close 2023-11-13 17:45:37 -04:00
Joey Hess
cde081a025
guard against wrong timestamps in git log
For example, my sound repo has in the git-annex branch a commit from
2036, which is followed by one from 2034, in amoung commits from 2013.
Clearly there was a problem with the clock.

Since git log --date-order has a behavior of
"Show no parents before all of its children are shown", the data still
gets processed ok. The future timestamp just prevented displaying data
after that commit. It seems better, when the clock was wrong, to display
a wrong date, and then return to right dates.

It would be nice to filter out the wrong dates from display entirely,
but that seems it would need to buffer the whole output. This command is
too slow to buffer it all before displaying anything, and anyway this
kind of problem is probably rare.

Sponsored-by: Joshua Antonishen on Patreon
2023-11-13 15:06:04 -04:00
Joey Hess
2ab11fe06e
treat dead repos as 0 size
With this, git annex log --totalsizes can be compared with
git-annex info's "combined annex size of all repositories"
to double-check it works correctly.

In my sound repo, the two match.

In my big repo, the two report slightly different sizes,
with the former being 1.3 gb smaller than the latter.
I don't know the reason for this disreprency. Given the 30+tb size of
the repo, it's a small difference.

It seems possible that a bug in an old version of git-annex could
explain it. Eg, if an old git-annex lost a line when updating trust.log
or a location log in a merge, git-annex info would see only what it
replaced it with, while git-annex log will see the previous value as
well.

Sponsored-by: Leon Schuermann on Patreon
2023-11-13 15:05:48 -04:00
Joey Hess
38b9ebc5fd
newtype MapLog
Noticed that Semigroup instance of Map is not suitable to use
for MapLog. For example, it behaved like this:

ghci>  parseTrustLog "foo 1 timestamp=10\nfoo 2 timestamp=11" <> parseTrustLog "foo X timestamp=12"
fromList [(UUID "foo",LogEntry {changed = VectorClock 11s, value = SemiTrusted})]

Which was wrong, it lost the newer DeadTrusted value.

Luckily, nothing used that Semigroup when operating on a MapLog. And this
provides a safe instance.

Sponsored-by: Graham Spencer on Patreon
2023-11-13 14:37:22 -04:00
Joey Hess
5d8b8a8ad0
git-annex log --totalsizes
Note that dead repositories are not yet handled so their sizes show as
nonzero after they are marked dead.

Sponsored-By: unqueued on Patreon
2023-11-13 13:15:36 -04:00
Joey Hess
d826dde59a
update 2023-11-13 13:09:39 -04:00
Joey Hess
dc02236c85
git-annex log --sizes
CSV format so it can be fed into a program to graph it.

Note that dead repositories are not yet handled so their sizes show as
nonzero after they are marked dead.

Sponsored-By: k0ld on Patreon
2023-11-13 13:07:22 -04:00
Joey Hess
385ddc3225
Merge branch 'master' of ssh://git-annex.branchable.com 2023-11-11 14:43:13 -04:00
Lukey
7df85809c8 Added a comment 2023-11-11 16:13:28 +00:00
Joey Hess
6203b8afba
the last line is for the current time 2023-11-10 17:37:55 -04:00
Joey Hess
574514545c
git-annex log --sizesof
This can take a lot of memory. I decided to violate the usual rule in
git-annex that it operate in constant memory no matter how many annexed
objects. In this case, it would be hard to be fast without using a big
map of the location logs. The main difficulty here is that there can be
many git-annex branches and it needs to display a consistent view at a
point in time, which means merging information from multiple git-annex
branches.

I have not checked if there are any laziness leaks in this code. It
takes 1 gb to run in my big repo, which is around what I estimated
before writing it.

2 options that are documented are not yet implemented.

Small bug: With eg --when=1h, it will display at 12:00 then 1:10 if the
next change after 12:59 is then. Then it waits until after 2:10 to
display the next change. It ought to wait until after 2:00.

Sponsored-by: Brock Spratlen on Patreon
2023-11-10 17:26:10 -04:00
Joey Hess
561c036664
split out generic git log parser
Sponsored-By: Jack Hill on Patreon
2023-11-10 15:40:03 -04:00
Joey Hess
ae401fae14
Merge branch 'master' of ssh://git-annex.branchable.com 2023-11-08 14:14:41 -04:00
Joey Hess
6a8672d756
todo 2023-11-08 14:14:35 -04:00
Joey Hess
11cc9f1933
info: Added calculation of combined annex size of all repositories
Factored out overLocationLogs from CmdLine.Seek, which can calculate this
pretty fast even in a large repo. In my big repo, the time to run git-annex
info went up from 1.33s to 8.5s.

Note that the "backend usage" stats are for annexed files in the working
tree only, not all annexed files. This new data source would let that be
changed, but that would be a confusing behavior change. And I cannot
retitle it either, out of fear something uses the current title (eg parsing
the json).

Also note that, while time says "402108maxresident" in my big repo now,
up from "54092maxresident", top shows the RES constant at 64mb, and it
was 48mb before. So I don't think there is a memory leak. I tried using
deepseq to force full evaluation of addKeyCopies and memory use didn't
change, which also says no memory leak. And indeed, not even calling
addKeyCopies resulted in the same memory use. Probably the increased memory
usage is buffering the stream of data from git in overLocationLogs.

Sponsored-by: Brett Eisenberg on Patreon
2023-11-08 13:35:11 -04:00
Joey Hess
8768966d97
improve comments 2023-11-08 12:06:03 -04:00
jcjgraf
215c96be95 2023-11-07 20:42:11 +00:00
mih
4d242b88eb Added a comment: What about temporary annex.private declaration? 2023-11-07 15:49:47 +00:00
oadams
9ef6257c2f Added a comment 2023-11-07 08:30:21 +00:00
oadams
f8340fc921 2023-11-07 08:26:44 +00:00
Joey Hess
323e4f5a2f
expand description 2023-11-06 11:11:50 -04:00
aurelien@f0d0a0c7da69eff6badf0464898f0a859f69114d
eb846403c9 2023-11-06 01:48:43 +00:00
unqueued
184ebb8802 Added a comment 2023-11-05 21:32:17 +00:00
nobodyinperson
b0b54b678b report 2023-11-05 13:58:25 +00:00
Joey Hess
4e35067325
windows hook scripts newlines without CR
Windows: When git-annex init is installing hook scripts, it will
avoid ending lines with CR for portability.

Existing hook scripts that do have CR line endings will not be changed.
While it would be possible to have git-annex init upgrade them, users would
need to know to use that command to do that, and it would add complexity
that does not seem warranted for the portability benefit alone.

Sponsored-by: Luke T. Shumaker on Patreon
2023-11-02 13:37:04 -04:00
Joey Hess
c41ca6c832
convert StorableCipher to ByteString
This allows getting rid of the ugly and error prone handling of
"bag of bytes" String in Remote.Helper.Encryptable.
Avoiding breakage like that dealt with by commit
9862d64bf9

And allows converting Utility.Gpg to use ByteString for IO, which is
a welcome change.

Tested the new git-annex interoperability with old, using all 3
encryption= types.

Sponsored-By: the NIH-funded NICEMAN (ReproNim TR&D3) project
2023-11-01 14:39:49 -04:00
Joey Hess
be6b56df4c
remove unused import 2023-11-01 13:14:39 -04:00
Joey Hess
9862d64bf9
bring back "bag of bytes" handling for ciphers
Fixes test suite failure with LANG=C caused by commit
3742263c99

Sponsored-By: the NIH-funded NICEMAN (ReproNim TR&D3) project
2023-11-01 13:09:42 -04:00
Joey Hess
c927a38dc5
reproduced 2023-11-01 12:19:50 -04:00
Joey Hess
b4c052a4bf
Merge branch 'master' of ssh://git-annex.branchable.com 2023-11-01 12:03:55 -04:00
Joey Hess
3d85489603
update 2023-11-01 08:43:32 -04:00
Joey Hess
caf1652796
update 2023-11-01 08:42:15 -04:00
Joey Hess
1ec3c3e541
update 2023-10-31 14:06:46 -04:00
yarikoptic
99ec795c6a initial bug report 2023-10-30 22:03:20 +00:00
jkniiv
14c38e8a25 Added a comment 2023-10-30 21:32:07 +00:00
Joey Hess
f8d35d9480
lookupkey: Sped up --batch
When the file is relative, it does not need to be passed
through git lsfiles to normalize it.

Sponsored-by: Kevin Mueller on Patreon
2023-10-30 14:59:09 -04:00
Joey Hess
8a540138b6
Merge branch 'master' of ssh://git-annex.branchable.com 2023-10-30 14:45:58 -04:00
Joey Hess
f905bd1508
comment 2023-10-30 14:45:52 -04:00
Joey Hess
39ca30e004
Windows: Consistently avoid ending output lines with CR
This matches the behavior of git on Windows, which does not end lines with
CR either.

Previously, git-annex used to always write lines with putStrLn, so would
output CR on Windows. Then parts of it changed to use ByteString.putStrLn,
which does not output CR. That left its output inconsistent, sometimes
within the same command.

The point of this commit is to get back to consistency. Having the same
behavior as git is a nice bonus. It would be much harder to make it
consistently output CR, because every place it uses ByteString.putStrLn or
similar would need to be changed.

Sponsored-by: Nicholas Golder-Manning on Patreon
2023-10-30 14:43:43 -04:00
Joey Hess
eb42935e58
Windows: Fix CRLF handling in some log files
In particular, the mergedrefs file was written with CR added to each line,
but read without CRLF handling. This resulted in each update of the file
adding CR to each line in it, growing the number of lines, while also
preventing the optimisation from working, so it remerged unncessarily.

writeFile and readFile do NewlineMode translation on Windows. But the
ByteString conversion prevented that from happening any longer.

I've audited for other cases of this, and found three more
(.git/annex/index.lck, .git/annex/ignoredrefs, and .git/annex/import/). All
of those also only prevent optimisations from working. Some other files are
currently both read and written with ByteString, but old git-annex may have
written them with NewlineMode translation. Other files are at risk for
breakage later if the reader gets converted to ByteString.

This is a minimal fix, but should be enough, as long as I remember to use
fileLines when splitting a ByteString into lines. This leaves files written
using ByteString without CR added, but that's ok because old git-annex has
no difficulty reading such files.

When the mergedrefs file has gotten lines that end with "\r\r\r\n", this
will eventually clean it up. Each update will remove a single trailing CR.

Note that S8.lines is still used in eg Command.Unused, where it is parsing
git show-ref, and similar in Git/*. git commands don't include CR in their
output so that's ok.

Sponsored-by: Joshua Antonishen on Patreon
2023-10-30 14:23:23 -04:00
Joey Hess
ea2876ae77
add PackageImports
This makes loading it in ghci work when both crypton and cryptonite are
installed.
2023-10-30 14:10:46 -04:00
mih
2299ee2519 Report on a possibly unknown slowness of lookupkey 2023-10-30 07:45:05 +00:00
Joey Hess
bef1d68d13
Merge branch 'master' of ssh://git-annex.branchable.com 2023-10-27 17:47:50 -04:00
Joey Hess
a09d2954c5
remove wrongly nested comment
This happened to prevent checkout on windows, due to filename too long.
2023-10-27 17:47:23 -04:00
jkniiv
d0b381bd42 Added a comment 2023-10-27 18:45:03 +00:00
Joey Hess
73c02e4fe3
comment 2023-10-26 15:22:22 -04:00
Joey Hess
3330d80ae2
Merge branch 'master' of ssh://git-annex.branchable.com 2023-10-26 14:23:08 -04:00