This handles cases where a single key is used by multiple files in the
exported tree. When using `git-annex push`, the key's content gets
stored in the annexobjects location, and then when the branch is pushed,
it gets renamed from the annexobjects location to the first exported
file. For subsequent exported files, a copy of the content needs to be
made. This causes it to download the key from the remote in order to
upload another copy to it.
This is not needed when using `git push` followed by `git-annex copy --to`
the proxied remote, because the received key is stored at all export
locations then.
Also, fixed handling of the synced branch push, it was exporting master
when synced/master was pushed.
Note that currently, the first push to the remote does not see that it
is able to get a key from it in order to upload it back. It displays
"(not available)". The second push is able to. Since git-annex push
pushes first the synced branch and then the branch, this does end up
with a full export being made, but it is not quite right.
This is similar to git-annex copy --from --to, in that it downloads a
local copy, locks it for removal, uploads it, and drops it. Removal of
the temporary local copy is done without verifying numcopies for the
same reason as that command.
I do wonder, looking at this, if there's a race where the local copy
gets used as a copy to allow some other drop in the narrow window after
it is downloaded and before it gets locked for removal. That would need
some other repository to have an out of date location log that says the
repository contains a copy of the key, in order for it to try to use it
as a copy. If there is such a race, git-annex copy/move would also be
vulnerable to it. It would be better to lock it for removal before
starting to download it! That is possible in v10 repositories, which do
use a separate content lock file.
Note that, when the exported tree contains several files that use the
same key, it will be downloaded repeatedly, once per time needed to
upload it. It would be possible to avoid that extra work, but it would
complicate this since the local copy would need to be preserved, locked
for removal, until the end. Also, that would mean that interrupting the
export would leave possibly a lot of temporarily downloaded keys in the
local repository, while currently it can only leave one.
Since git-annex sync sends the sync branch first, and only displays the
output of the push to the sync branch, this makes git-annex
post-retrieve's output when updating the exported tree be visible when
syncing.
This also makes syncing with a non-bare repository still update the
exported tree, even when the checked out branch is not able to be
updated. The sync branch gets sent regardless.
When getting from a P2P HTTP remote, prompt for credentials when required,
instead of failing.
This feels like it might be a bug in servant-client. withClientM's type
suggests it would not throw a ClientError. But it does in this case.
This handles the workflow where the branch is first pushed to the proxy,
and then files in the exported tree are later are copied to the proxied remote.
Turns out that the way the export log is structured, nothing needs
to be done to finalize the export once the last key is sent to it. Which
is great because that would have been a lot of complication. On
receiving the push, Command.Export runs and calls recordExportBeginning,
does as much as it can to update the export with the files currently
on it, and then calls recordExportUnderway. At that point, the
export.log records the export as "complete", but it's not really. And
that's fine. The same happens when using `git-annex export` when some
files are not available to send. Other repositories that have
access to the special remote can already retrieve files from it. As
the missing files get copied to the exported remote, all that needs
to be done is record each in the export db.
At this point, proxying to exporttree=yes annexobjects=yes special remotes
is fully working. Except for in the case where multiple files in the
tree use the same key, and the files are sent to the proxied remote
before pushing the tree.
It seems that even special remotes without annexobjects=yes will work if
used with the workflow where the git-annex branch is pushed before
copying files. But not with the `git-annex push` workflow.
It works when using git-annex sync/push/assist, or when manually sending
all content to the proxied remote before pushing to the proxy remote.
But when the push comes before the content is sent, sending content does
not update the exported tree.
(When possible, of course it may not be there, or it may get renamed from
there for another exported file first. Or the remote may not support
renames.)
This will avoids redundant uploads.
An example case where this is important: Proxying to a exporttree remote,
a file is uploaded to it but is not yet in an exported tree. When the
exported tree is pushed, the remote needs to be updated by exporting to
it. In this case, the proxy doesn't have a copy of the file, so it would
need to download it from annexobjects before uploading it to the final
location. With this optimisation, it can just rename it.
However: If a key is used twice in an exported tree, it seems a proxy
will need to download and reupload anyway. Unless a copy operation is
added to exporttree remotes..
This avoids needing to re-upload the file again to get it to the
annexobjects location, which git-annex sync was doing when it was
preferred content.
If the file is not preferred content, sync will drop it from the
annexobjects location.
If the file has been deleted from the tree, it will remain in the
annexobjects location until an unused/dropunused pass is done.
Decided not to use the annexobjects location for exportTempName.
There doesn't seem to be any actual benefit to doing that, because an
export that renames to exportTempName always renames it back from that
to another location.
Also the annexobjects directory won't actually help with the paired
rename issue.
The file in the annexobjects location may have been renamed from a
previously exported file that got deleted in a subsequent export.
Or it may be renamed to annexobjects temporarily before being renamed to
another name (to handle eg pairwise renames).
But, an exported file is not guaranteed to contain the content of the
key that the local repository last exported there. Another tree could
have been exported from elsewhere in the meantime.
So, files in annexobjects do not necessarily have the content of their
key. And so have to be strongly verified when retrieving. The same as
is done when retrieving exported files.
This fixes a problem with datalad's test suite, where loading the cluster
log happened to cause the git-annex branch commits to take a different
shape, with an additional commit.
It's also faster though, since many commands don't need the cluster log.
Just fill Annex.clusters with a thunk.
Sponsored-by: the NIH-funded NICEMAN (ReproNim TR&D3) project
While usually uploading to a special remote does not verify the content,
the content in a repository is assumed to be valid, and there is no trust
boundary. But with a proxied special remote, there may be users who are
allowed to store objects, but are not really trusted.
Another way to look at this is it's the equivilant of git-annex-shell
checking the hash of received data, which it does (see StoreContent
implementation).
An interrupted PUT to cluster that has a node that is a special remote
over http left open the connection to the cluster, so the next request
opens another one. So did an interrupted PUT directly to the proxied
special remote over http.
proxySpecialRemote was stuck waiting for all the DATA. Its connection
remained open so it kept waiting.
In servePut, checktooshort handles closing the P2P connection
when too short a data is received from PUT. But, checktooshort was only
called after the protoaction, which is what runs the proxy, which is
what was getting stuck. Modified it to run as a background thread,
which waits for the tooshortv to be written to, which gather always does
once it gets to the end of the data received from the http client.
That makes proxyConnection's releaseconn run once all data is received
from the http client. Made it close the connection handles before
waiting on the asyncworker thread. This lets proxySpecialRemote finish
processing any data from the handle, and then it will give up,
more or less cleanly, if it didn't receive enough data.
I say "more or less cleanly" because with both sides of the P2P
connection taken down, some protocol unhappyness results. Which can lead
to some ugly debug messages. But also can cause the asyncworker thread
to throw an exception. So made withP2PConnections not crash when it
receives an exception from releaseconn.
This did have a small change to the behavior of an interrupted PUT when
proxying to a regular remote. proxyConnection has a protoerrorhandler
that closes the proxy connection on a protocol error. But the proxy
connection is also closed by checktooshort when it closes the P2P
connection. Closing the same proxy connection twice is not a problem,
it just results in duplicated debug messages about it.
An interrupted `git-annex copy --to` a cluster via the http server,
when repeated, failed. The http server output "transfer already in
progress, or unable to take transfer lock". Apparently a second
connection was opened to the cluster, because the first connection
never got shut down.
Turned out the problem was that when proxying to a cluster, it would read a
short ByteString from the client, and send that to the nodes. But that left the
nodes warning more. Meanwhile, the proxy was expecting a SUCCESS/FAILURE
message from the nodes. So it didn't return, and so the cluster connection
stayed open.
This fixes a problem when git-annex testremote is run against a cluster
accessed via the http server. Annex.Cluster uses the location log
to find nodes that contain a key when checking if the key is present or getting
it. Just after a key was stored to a cluster node, reading the location log
was not getting the UUID of that node.
Apparently the Annex action that wrote to the location log, and the one
that read from it were run with two different Annex states. The http server
does use several different Annex threads.
BranchState was part of the AnnexState, and so two threads could have
different BranchStates.
Moved BranchState to the AnnexRead, so all threads will see the common state.
This might possibly impact performance. If one thread is writing changes to the
branch, and another thread is reading from the branch, the writing thread will
now invalidate the BranchState's cache, which will cause the reading thread to
need to do extra work. But correctness is surely more important. If did is
found to have impacted performance, it could probably be dealt with by doing
smarter BranchState cache invalidation.
Another way this might impact performance is that the BranchState has a small
cache. If several threads were reading from the branch and relying on the value
they just read still being in the case, now a cache miss will be more likely.
Increasing the BranchState cache to the number of jobs might be a good
idea to amelorate that. But the cache is currently an innefficient list,
so making it large would need changes to the data types.
(Commit 4304f1b6ae dealt with a follow-on
effect of the bug fixed here.)
Wired it up and it seems to basically work, although the test suite is
not fully passing.
Note that --jobs currently gets multiplied by the number of nodes in the
cluster, which is probably not good.
proxyRequest was treating UNLOCKCONTENT as a separate request.
That made it possible for there to be two different connections to the
proxied remote, with LOCKCONTENT being sent to one, and UNLOCKCONTENT
to the other one. A protocol error.
git-annex testremote now passes against a http proxied remote.
sendExactly will now be sure to evaluate the whole lazy ByteString.
In this case, the lazy ByteString was exactly the right lenth.
But, it seems that L.take caused it to not actually be fully evaluated.
In servePut, this manifested as gather never being fully evaluated,
which caused the hang.
Very, very subtle, and horrible bug. Clearly the use of lazy ByteString
(or really just laziness) is at fault, and it would be very worth moving
to conduit or whatever to avoid this.
removeOldestProxyConnectionPool will be innefficient the larger the pool
is. A better data structure could be more efficient. Eg, make each value
in the pool include the timestamp of its oldest element, then the oldest
value can be found and modified, rather than rebuilding the whole Map.
But, for pools of a few hundred items, this should be fine. It's O(n*n log n)
or so.
Also, when more than 1 connection with the same pool key exists,
it's efficient even for larger pools, since removeOldestProxyConnectionPool
is not needed.
The default of 1 idle connection could perhaps be larger.. like the
number of jobs? Otoh, it seems good to ramp up and down the number of
connections, which does happen. With 1, there is at most one stale
connection, which might cause a request to fail.
The proxy always checks the protocol version of a remote before talking
to it in a version-specific way, so the protocol version in the ProxyParams
is the client's protocol version. The remote will always be at the same or
an older protocol version than the client.
Note that in relayDATAFinish, when the client is at protocol version 0,
the remote must thus be as well, and that's why its version is not
checked in the case for that.
With that clarified, it's evident that, in P2P.Http.State, there's no
need to look at the proxied remote's protocol version at all.
Port 80 would need root, not a good idea, so pick something that might
work by default.
9418 is git protocol's port. 9419 is used by something, but nothing
known uses 9417, so it's as good a default as any.
But, it's buggy: the server hangs without processing the VALIDITY,
and I can't seem to work out why. As far as I can see, storefile
is getting as far as running the validitycheck, which is supposed to
read that, but never does.
This is especially strange because what seems like the same protocol
doesn't hang when servePut runs it. This made me think that it needed
to use inAnnexWorker to be more like servePut, but that didn't help.
Another small problem with this is that it does create an empty
.git/annex/tmp/ file for the key. Since this will usually be used in
combination with servePut, that doesn't seem worth worrying about much.
This means that when the client sends a truncated data to indicate
invalidity, DATA is not passed the full expected data. That leaves the
P2P connection in a state where it cannot be reused. While so far, they
are not reused, they will be later when proxies are supported. So, have
to close the P2P connection in this situation.
Always truncate instead. The padding risked something not noticing the
content was bad and getting a file that was corrupted in a novel way
with the padding "X" at the end. A truncated file is better.
Made the data-length header required even for v0. This simplifies the
implementation, and doesn't preclude extra verification being done for
v0.
The connectionWaitVar is an ugly hack. In servePut, nothing waits
on the waitvar, and I could not find a good way to make anything wait on
it.
