When the recorded submodule commit changes on an adjusted branch, the
change is carried in the function that reverseAdjustedCommit passes
for adjustTree's adjusttreeitem parameter. Update the CommitObject
handling in adjustTree to consider adjusttreeitem so that a submodule
change is synced back.
Running `git annex add --force-small` on a modified submodule fails
when the submodule path is fed to hash-object. This failure is
unlikely to be triggered by a caller passing a submodule explicitly to
`git annex add` because there's nothing useful that annex-add can do
with a submodule. A more likely scenario for hitting this failure is
that the caller passes "." or a subdirectory to `annex-add` while a
submodule underneath the specified path happens to be modified.
addSmallOverridden already routes symbolic links through addFile
rather than using the custom hash-object/update-index call. The
latter is valid only for regular files, so extend this condition so
that everything that isn't a regular file goes through addFile. Doing
so avoids the above error because submodules come in as directories.
addSmallOverridden calls getFileStatus and then checks the result with
isSymbolicLink. getFileStatus dereferences symbolic links, so
isSymbolicLink will always return false (assuming the getFileStatus
call doesn't fail on a broken link). Use getSymbolicLinkStatus
instead.
Considered using the system tmp dir rather than putting it inside .t/,
but then if TEMP were set to a long path, that would be a problem.
Relative path seems the best approach, and will always be nice and
short.
The only downside of it is, if git-annex somehow changes the cwd
while running, it would break. But git-annex does not do that, and
should never do that.
