Commit graph

1724 commits

Author SHA1 Message Date
Joey Hess
f7c7a5ca7e
remove redundant patern match 2022-06-28 15:12:32 -04:00
Joey Hess
ff6b36c706
assistant prompt pushing of manual commits to remotes
assistant: When annex.autocommit is set, notice commits that the user makes
manually, and push them out to remotes promptly.

Sponsored-by: Boyd Stephen Smith Jr. on Patreon
2022-03-31 13:02:16 -04:00
Joey Hess
d266a41f8d
prevent numcopies or mincopies being configured to 0
Ignore annex.numcopies set to 0 in gitattributes or git config, or by
git-annex numcopies or by --numcopies, since that configuration would make
git-annex easily lose data. Same for mincopies.

This is a continuation of the work to make data only be able to be lost
when --force is used. It earlier led to the --trust option being disabled,
and similar reasoning applies here.

Most numcopies configs had docs that strongly discouraged setting it to 0
anyway. And I can't imagine a use case for setting to 0. Not that there
might not be one, but it's just so far from the intended use case of
git-annex, of managing and storing your data, that it does not seem like
it makes sense to cater to such a hypothetical use case, where any
git-annex drop can lose your data at any time.

Using a smart constructor makes sure every place avoids 0. Note that this
does mean that NumCopies is for the configured desired values, and not the
actual existing number of copies, which of course can be 0. The name
configuredNumCopies is used to make that clear.

Sponsored-by: Brock Spratlen on Patreon
2022-03-28 15:20:34 -04:00
Joey Hess
952664641a
turn of PackageImports in cabal file
This makes it easier to build eg benchmarks of individual modules.

May be that most of these PackageImports are not really necessary,
dunno.
2022-02-25 13:16:36 -04:00
Joey Hess
4cd9325c2c
fold parseLinkTarget into parseLinkTargetOrPointer
Only one place remained that differentiated between them.

It is the case that a symlink target that happens to contain a newline
somehow will be treated as a link to a key truncated at the newline.
This is super unlikely to happen, and since a key cannot actually
contain a newline, it's as good a behavior as any. Anyway, this commit
does not change the behavior there, although arguably it should be
changed. Note that getAnnexLinkTarget does prevent a symlink target
containing a newline.

Sponsored-by: Dartmouth College's Datalad project
2022-02-23 12:30:32 -04:00
Joey Hess
e416635021
renameremote: Better handling of case where there are multiple special remotes with a name
Instead of renaming one at random, error out and ask that a uuid be
specified.

Sponsored-by: Brett Eisenberg on Patreon
2022-01-05 15:24:02 -04:00
Joey Hess
23a485498f
handle Annex.Branch.files with read-only unmerged git-annex branches
It would be difficult to make Annex.Branch.files query the unmerged
git-annex branches. Might be possible, similar to what was discussed in
7f6b2ca49c but again I decided to make it
not do anything in that situation to start with before adding such a
complicated thing.

git-annex info uses it when getting info about a repostory. The choices
were to make that fail with an error, or display the info it can, and
change the output slightly for the bits of info it cannot access. While
that is a behavior change, and I want to avoid any behavior changes due
to unmerged git-annex branches in a read-only repo, displaying a message
that is not a number seems unlikely to break anything that was consuming
a number, any worse than throwing an exception would. Probably.

Also git-annex unused --from origin is made to throw an error, but
it would fail later anyway when trying to write to the unused log files.

Sponsored-by: Dartmouth College's Datalad project
2021-12-27 15:28:31 -04:00
Joey Hess
6d7ecd9e5d
merge git-annex branch in memory in read-only repository
Improved support for using git-annex in a read-only repository, git-annex
branch information from remotes that cannot be merged into the git-annex
branch will now not crash it, but will be merged in memory.

To avoid this making git-annex behave one way in a read-only repository,
and another way when it can write, it's important that Annex.Branch.get
return the same thing (modulo log file compaction) in both cases.

This manages that mostly. There are some exceptions:

- When there is a transition in one of the remote git-annex branches
  that has not yet been applied to the local or other git-annex branches.
  Transitions are not handled.
- `git-annex log` runs git log on the git-annex branch, and so
  it will not be able to show information coming from the other, not yet
  merged branches.
- Annex.Branch.files only looks at files in the git-annex branch and not
  unmerged branches. This affects git-annex info output.
- Annex.Branch.hs.overBranchFileContents ditto. Affects --all and
  also importfeed (but importfeed cannot work in a read-only repo
  anyway).
- CmdLine.Seek.seekFilteredKeys when precaching location logs.
  Note use of Annex.Branch.fullname
- Database.ContentIdentifier.needsUpdateFromLog and updateFromLog

These warts make this not suitable to be merged yet.

This readonly code path is more expensive, since it has to query several
branches. The value does get cached, but still large queries will be
slower in a read-only repository when there are unmerged git-annex
branches.

When annex.merge-annex-branches=false, updateTo skips doing anything,
and so the read-only repository code does not get triggered. So a user who
is bothered by the extra work can set that.

Other writes to the repository can still result in permissions errors.
This includes the initial creation of the git-annex branch, and of course
any writes to the git-annex branch.

Sponsored-by: Dartmouth College's Datalad project
2021-12-27 13:21:15 -04:00
Joey Hess
0697dbe2d2
rename to avoid warning
a new version of persistent exports an "exists"
2021-10-18 16:25:00 -04:00
Joey Hess
0a951ac758
improve function name
onAddUnlocked suggested that it had to add the file locked, but it
doesn't, it only queues the add of the file, and it's up to the
committer what to do -- which is currently indeed to always add the file
locked.
2021-09-27 12:52:30 -04:00
Joey Hess
4fef94d764
simplify annex.stalldetection handling
RemoteGitConfig parsing looks for annex.stalldetection when a remote
does not have a per-remote config for it, so no need for a separate
gobal config.

Sponsored-by: Noam Kremen on Patreon
2021-09-22 10:46:10 -04:00
Joey Hess
ec12537774
defer write permissions checking in import until after copy to repo
This should complete the fix started in
6329997ac4, fixing the actual cause of the
test suite failure this time.

Sponsored-by: Dartmouth College's Datalad project
2021-09-02 13:45:21 -04:00
Joey Hess
d154e7022e
incremental verification for web special remote
Except when configuration makes curl be used. It did not seem worth
trying to tail the file when curl is downloading.

But when an interrupted download is resumed, it does not read the whole
existing file to hash it. Same reason discussed in
commit 7eb3742e4b76d1d7a487c2c53bf25cda4ee5df43; that could take a long
time with no progress being displayed. And also there's an open http
request, which needs to be consumed; taking a long time to hash the file
might cause it to time out.

Also in passing implemented it for git and external special remotes when
downloading from the web. Several others like S3 are within striking
distance now as well.

Sponsored-by: Dartmouth College's DANDI project
2021-08-18 15:02:22 -04:00
Joey Hess
fa62c98910
simplify and speed up Utility.FileSystemEncoding
This eliminates the distinction between decodeBS and decodeBS', encodeBS
and encodeBS', etc. The old implementation truncated at NUL, and the
primed versions had to do extra work to avoid that problem. The new
implementation does not truncate at NUL, and is also a lot faster.
(Benchmarked at 2x faster for decodeBS and 3x for encodeBS; more for the
primed versions.)

Note that filepath-bytestring 1.4.2.1.8 contains the same optimisation,
and upgrading to it will speed up to/fromRawFilePath.

AFAIK, nothing relied on the old behavior of truncating at NUL. Some
code used the faster versions in places where I was sure there would not
be a NUL. So this change is unlikely to break anything.

Also, moved s2w8 and w82s out of the module, as they do not involve
filesystem encoding really.

Sponsored-by: Shae Erisson on Patreon
2021-08-11 12:13:31 -04:00
Joey Hess
b3c4579c79
work around strange auto-init bug
git-annex get when run as the first git-annex command in a new repo did not
populate unlocked files. (Reversion in version 8.20210621)

I am not entirely happy with this, because I don't understand how
428c91606b caused the problem in the first
place, and I don't fully understand how skipping calling scanAnnexedFiles
during autoinit avoids the problem.

Kept the explicit call to scanAnnexedFiles during git-annex init,
so that when reconcileStaged is expensive, it can be made to run then,
rather than at some later point when the information is needed.

Sponsored-by: Brock Spratlen on Patreon
2021-07-30 18:36:03 -04:00
Joey Hess
b6bea0d3f2
remove direct mode remnant of merging unrelated histories
sync, merge, post-receive: Avoid merging unrelated histories, which used to
be allowed only to support direct mode repositories.

(However, sync does still merge unrelated histories when importing trees
from special remotes, and the assistant still merges unrelated histories
always.)

See 556b2ded2b for why this was added
back in 2016, for direct mode.

This is a behavior change, which might break something that was relying
on sync merging unrelated histories, but git had a good reason to
prevent it, since it's easy to foot shoot with it, and git-annex should
follow suit.

Sponsored-by: Noam Kremen on Patreon
2021-07-19 11:41:26 -04:00
Joey Hess
33a80d083a
sync --quiet
* sync: When --quiet is used, run git commit, push, and pull without
  their ususual output.
* merge: When --quiet is used, run git merge without its usual output.

This might also make --quiet work better for some other commands
that make commits, like git-annex adjust.

Sponsored-by: Kevin Mueller on Patreon
2021-07-19 11:28:47 -04:00
Joey Hess
8885bd3c5b
addistant: honor annex.delayadd for non-large files
assistant: When adding non-large files to git, honor annex.delayadd
configuration.

Also, don't add non-large files to git when they are still
being written to. This came for free, since the changes to non-large
files get queued up with the ones to large files, and run through the lsof
check.

Sponsored-by: Luke Shumaker on Patreon
2021-07-13 12:17:00 -04:00
Joey Hess
d2c48404a8
assistant: Avoid unncessary git repository repair
In a situation where git fsck gets confused about a commit that is made
while it's running.

Sponsored-by: Graham Spencer on Patreon
2021-06-30 18:00:16 -04:00
Joey Hess
7d684c4074
comment typo 2021-04-08 13:08:01 -04:00
Joey Hess
bc50812b51
remove webapp debug check box
It can't enable or disable debug output, after recent changes, w/o
restarting git-annex, or perhaps messing with the Annex monad's
internals. Doesn't seem worth supporting it any longer.
2021-04-06 17:23:12 -04:00
Joey Hess
13c090b37a
use fastDebug everywhere it can be used
None of these are likely to yeild a noticable speedup though.
2021-04-06 15:41:24 -04:00
Joey Hess
1b645e1ace
added --debugfilter (and annex.debugfilter) 2021-04-05 15:31:10 -04:00
Joey Hess
aaba83795b
switch from hslogger to purpose-built Utility.Debug
This uses a DebugSelector, rather than debug levels, which will allow
for a later option like --debug-from=Process to only
see debuging about running processes.

The module name that contains the thing being debugged is used as the
DebugSelector (in most cases; does not need to be a hard and fast rule).
Debug calls were changed to add that. hslogger did not display
that first parameter to debugM, but the DebugSelector does get
displayed.

Also fastDebug will allow doing debugging in places that are used in
tight loops, with the DebugSelector coming from the Annex Reader
essentially for free. Not done yet.
2021-04-05 13:40:31 -04:00
Joey Hess
c2f612292a
start splitting out readonly values from AnnexState
Values in AnnexRead can be read more efficiently, without MVar overhead.
Only a few things have been moved into there, and the performance
increase so far is not likely to be noticable.

This is groundwork for putting more stuff in there, particularly a value
that indicates if debugging is enabled.

The obvious next step is to change option parsing to not run in the
Annex monad to set values in AnnexState, and instead return a pure value
that gets stored in AnnexRead.
2021-04-02 15:51:44 -04:00
Joey Hess
a8b837aaef
add git ls-tree --long parser
Not yet used, but allows getting the size of items in the tree fairly
cheaply.

I noticed that CmdLine.Seek uses ls-tree and the feeds the files into
another long-running process to check their size. That would be an
example of a place that might be sped up by using this. Although in that
particular case, it only needs to know the size of unlocked files, not
locked. And since enabling --long probably doubles the ls-tree runtime
or more, the overhead of using it there may outwweigh the benefit.
2021-03-23 12:47:00 -04:00
Joey Hess
1b63132ca3
add searchPathContents
And rename related functions for consistency.
2021-02-02 19:06:15 -04:00
Joey Hess
cc89699457
mincopies
This is conceptually very simple, just making a 1 that was hard coded be
exposed as a config option. The hard part was plumbing all that, and
dealing with complexities like reading it from git attributes at the
same time that numcopies is read.

Behavior change: When numcopies is set to 0, git-annex used to drop
content without requiring any copies. Now to get that (highly unsafe)
behavior, mincopies also needs to be set to 0. It seemed better to
remove that edge case, than complicate mincopies by ignoring it when
numcopies is 0.

This commit was sponsored by Denis Dzyubenko on Patreon.
2021-01-06 14:15:19 -04:00
Joey Hess
1c5fc8f047
Git.Queue: allow providing git common options like -c 2021-01-04 12:51:55 -04:00
Joey Hess
57b03630b3
support thirdPartyPopulated
These don't have importTree in their config, because they don't support
tree import, but they do still support import, and do not support export
or key/value modification.
2020-12-21 13:49:47 -04:00
Joey Hess
f62aee0525
fix handling of importtree-only remotes
Don't want to try to use these remotes as key/value remotes, which will
surely fail. It only recently became possible for importtree to be set
w/o exporttree, so before this code was ok.

(cherry picked from commit 97599cb0f7f4115aa5a3e81a91ee3d1d6c52dc84)
2020-12-18 15:13:30 -04:00
Joey Hess
74c1e0660b
propagate git-annex -c on to transferrer child process
git -c was already propagated via environment, but need this for
consistency.

Also, notice it does not use gitAnnexChildProcess to run the
transferrer. So nothing is done about avoid it taking the
pid lock. It's possible that the caller is already doing something that
took the pid lock, and if so, the transferrer will certianly fail,
since it needs to take the pid lock too. This may prevent combining
annex.stalldetection with annex.pidlock, but I have not verified it's
really a problem. If it was, it seems git-annex would have to take
the pid lock when starting a transferrer, and hold it until shutdown,
or would need to take pid lock when starting to use a transferrer,
and hold it until done with a transfer and then drop it. The latter
would require starting the transferrer with pid locking disabled for the
child process, so assumes that the transferrer does not do anyting that
needs locking when not running a transfer.
2020-12-15 11:36:25 -04:00
Joey Hess
d3f78da0ed
propagate signals to the transferrer process group
Done on unix, could not implement it on windows quite.

The signal library gets part of the way needed for windows.
But I had to open https://github.com/pmlodawski/signal/issues/1 because
it lacks raiseSignal.

Also, I don't know what the equivilant of getProcessGroupIDOf is on
windows. And System.Process does not provide a way to send any signal to
a process group except for SIGINT.

This commit was sponsored by Boyd Stephen Smith Jr. on Patreon.
2020-12-11 15:32:00 -04:00
Joey Hess
04c12aa6df
custom protocol for transferrer
Rather than using Read/Show, which would force me to preserve data types
into the future.

I considered just deriving json and sending that, but I don't much like
deriving json with data types that have named constructors (like Key
does) because again it locks in data type details.

So instead, used SimpleProtocol, with a fairly complex and unreadable
protocol. But it is as efficient as the p2p protocol at least, and as
future proof.

(Writing my own custom json instances would have worked but I thought
of it too late and don't want to do all the work twice. The only real
benefit might be that aeson could be faster.)

Note that, when a new protocol request type is added later, git-annex
trying to use it will cause the git-annex transferrer to display a
protocol error message. That seems ok; it would only happen if a new
git-annex found an old version of itself in PATH or the program
file. So it's unlikely, and all it can do anyway is display an error.
(The error message could perhaps be improved..)

This commit was sponsored by Jack Hill on Patreon.
2020-12-09 16:13:59 -04:00
Joey Hess
004a4f5fb1
factor out Types.Transferrer 2020-12-09 13:28:49 -04:00
Joey Hess
41f2c308ff
stall detection is working
New config annex.stalldetection, remote.name.annex-stalldetection, which
can be used to deal with remotes that stall during transfers, or are
sometimes too slow to want to use.

This commit was sponsored by Luke Shumaker on Patreon.
2020-12-08 15:22:18 -04:00
Joey Hess
fcc9e01556
finally using transferkeys
Seems to work! Even progress bars. Have not tested prompting or various
error message displays yet.

transferkeys had to be made to operate in different modes for the
Assistant and Annex monads. A bit ugly, but it did relegate that
really ugly Database.Keys.closeDb in transferkeys to only the assistant
code path.

This commit was sponsored by Noam Kremen.
2020-12-07 16:18:26 -04:00
Joey Hess
47016fc656
move TransferrerPool from Assistant state to Annex state
This commit was sponsored by Graham Spencer on Patreon.
2020-12-07 13:21:35 -04:00
Joey Hess
72e5764a87
move TransferrerPool from assistant
This old code will now be useful for git-annex beyond the assistant.

git-annex won't use the CheckTransferrer part, and won't run transferkeys
as a batch process, and will want withTransferrer to not shut down
transferkeys processes. Still, the rest of this is a good fit for what I
need now.

Also removed some dead code, and simplified a little bit.

This commit was sponsored by Mark Reidenbach on Patreon.
2020-12-07 12:50:48 -04:00
Joey Hess
438d5be1f7
support prompt in message serialization
That seems to be the last thing needed for message serialization.
Although it's only used in the assistant currently, so hard to tell if I
forgot something.

At this point, it should be possible to start using transferkeys
when performing transfers, which will allow killing a transferkeys
process if a transfer times out or stalls. But that's for another day.

This commit was sponsored by Ethan Aubin.
2020-12-04 14:54:09 -04:00
Joey Hess
31e417f351
finish message serialization of progress meters
Any given transfer can only display 1 progress meter at a time, or so
this code assumes. In some cases, there are progress meters for
different stages of a transfer, perhaps, and that is supported by this.

This commit was sponsored by Ethan Aubin.
2020-12-04 13:50:46 -04:00
Joey Hess
7a9b618d5d
fix problem with last commit and assistant
liftAnnex blocks all others calls, so avoid using it with a long-duration
call to readResponse.
2020-12-04 12:20:04 -04:00
Joey Hess
cad147cbbf
new protocol for transferkeys, with message serialization
Necessarily threw out the old protocol, so if an old git-annex assistant
is running, and starts a transferkeys from the new git-annex, it would
fail. But, that seems unlikely; the assistant starts up transferkeys
processes and then keeps them running. Still, may need to test that
scenario.

The new protocol is simple read/show and looks like this:

TransferRequest Download (Right "origin") (Key {keyName = "f8f8766a836fb6120abf4d5328ce8761404e437529e997aaa0363bdd4fecd7bb", keyVariety = SHA2Key (HashSize 256) (HasExt True), keySize = Just 30, keyMtime = Nothing, keyChunkSize = Nothing, keyChunkNum = Nothing}) (AssociatedFile (Just "foo"))
TransferOutput (ProgressMeter (Just 30) (MeterState {meterBytesProcessed = BytesProcessed 0, meterTimeStamp = 1.6070268727892535e9}) (MeterState {meterBytesProcessed = BytesProcessed 30, meterTimeStamp = 1.6070268728043e9}))
TransferOutput (OutputMessage "(checksum...) ")
TransferResult True

Granted, this is not optimally fast, but it seems good enough, and is
probably nearly as fast as the old protocol anyhow.

emitSerializedOutput for ProgressMeter is not yet implemented. It needs
to somehow start or update a progress meter. There may need to be a new
message that allocates a progress meter, and then have ProgressMeter
update it.

This commit was sponsored by Ethan Aubin
2020-12-03 16:21:20 -04:00
Joey Hess
a3b714ddd9
finish fixing removeLink on windows
9cb250f7be got the ones in RawFilePath,
but there were others that used the one from unix-compat, which fails at
runtime on windows. To avoid this,
import System.PosixCompat.Files hiding removeLink

This commit was sponsored by Ethan Aubin.
2020-11-24 13:20:44 -04:00
Joey Hess
b3c88da181
fix windows assistant upgrade glitch
Prevent windows assistant from trying (and failing) to upgrade itself,
which has never been supported on windows.

The new windows build is made with UPGRADE_LOCATION set, which enabled this
code path that had never run on windows before, and doesn't work. I don't
want to try to support self-upgrade on windows, or generally on other OS's
than the ones where its working, so added a check for that. This way the
build can keep setting UPGRADE_LOCATION and if some later git-annex does
learn how to upgrade itself on some OS, it won't need changing the build
setup.
2020-11-19 12:50:25 -04:00
Joey Hess
89a151608d
hush build warning on OSX 2020-11-13 13:34:34 -04:00
Joey Hess
6441c4c177
fix build on OSX 2020-11-12 11:36:14 -04:00
Joey Hess
326587a7d1
fix build on OSX more 2020-11-11 08:51:09 -04:00
Joey Hess
278c672141
fix build on OSX 2020-11-10 11:16:39 -04:00
Joey Hess
1db49497e0
finished this stage of the RawFilePath conversion
This commit was sponsored by Denis Dzyubenko on Patreon.
2020-11-06 14:10:58 -04:00
Joey Hess
2c8cf06e75
more RawFilePath conversion
Converted file mode setting to it, and follow-on changes.

Compiles up through 369/646.

This commit was sponsored by Ethan Aubin.
2020-11-05 18:45:37 -04:00
Joey Hess
9b0dde834e
convert getFileSize to RawFilePath
Lots of nice wins from this in avoiding unncessary work, and I think
nothing got slower.

This commit was sponsored by Boyd Stephen Smith Jr. on Patreon.
2020-11-05 11:32:57 -04:00
Joey Hess
5a1e73617d
finished this stage of the RawFilePath conversion
Finally compiles again, and test suite passes.

This commit was sponsored by Brock Spratlen on Patreon.
2020-11-04 14:20:37 -04:00
Joey Hess
4bcb4030a5
more RawFilePath conversion
580/645

This commit was sponsored by Jack Hill on Patreon.
2020-11-03 18:34:27 -04:00
Joey Hess
f45ad178cb
more RawFilePath conversion
At 318/645 after 4k lines of changes

This commit was sponsored by Jake Vosloo on Patreon.
2020-10-29 12:03:50 -04:00
Joey Hess
e505c03bcc
more RawFilePath conversion
nukeFile replaced with removeWhenExistsWith removeLink, which allows
using RawFilePath. Utility.Directory cannot use RawFilePath since setup
does not depend on posix.

This commit was sponsored by Graham Spencer on Patreon.
2020-10-29 10:50:29 -04:00
Joey Hess
8d66f7ba0f
more RawFilePath conversion
Added a RawFilePath createDirectory and kept making stuff build.

Up to 296/645

This commit was sponsored by Mark Reidenbach on Patreon.
2020-10-28 17:25:59 -04:00
Joey Hess
d6e94a6b2e
got configure working after Utility.Path ByteString conversion
Had to split out some modules because getWorkingDirectory needs unix,
which is not a build-dep of configure.

This commit was sponsored by Brock Spratlen on Patreon.
2020-10-28 15:01:19 -04:00
Joey Hess
62d630272e
improve name 2020-10-20 15:06:55 -04:00
Joey Hess
5cfcf1f05f
cache remote.log
Unlikely to speed up any of the existing uses much, but I want to use it
in a message that might be displayed many times.
2020-09-22 13:52:26 -04:00
Joey Hess
d0b06c17c0
Added --no-check-gitignore option for finer grained control than using --force.
add, addurl, importfeed, import: Added --no-check-gitignore option
for finer grained control than using --force.

(--force is used for too many different things, and at least one
of these also uses it for something else. I would like to reduce
--force's footprint until it only forces drops or a few other data
losses. For now, --force still disables checking ignores too.)

addunused: Don't check .gitignores when adding files. This is a behavior
change, but I justify it by analogy with git add of a gitignored file
adding it, asking to add all unused files back should add them all back,
not skip some. The old behavior was surprising.

In Command.Lock and Command.ReKey, CheckGitIgnore False does not change
behavior, it only makes explicit what is done. Since these commands are run
on annexed files, the file is already checked into git, so git add won't
check ignores.
2020-09-18 13:19:13 -04:00
Joey Hess
fcf5d11c63
add "input" field to json output
The use case of this field is mostly to support -J combined with --json.
When that is implemented, a user will be able to look at the field to
determine which of the requests they have sent it corresponds to.

The field typically has a single value in its list, but in some cases
mutliple values (eg 2 command-line params) are combined together and the
list will have more.

Note that json parsing was already non-strict, so old git-annex metadata
--json --batch can be fed json produced by the new git-annex and will
not stumble over the new field.
2020-09-15 16:22:44 -04:00
Joey Hess
3a05d53761
add SeekInput (not yet used)
No behavior changes (hopefully), just adding SeekInput and plumbing it
through to the JSON display code for later use.

Over the course of 2 grueling days.

withFilesNotInGit reimplemented in terms of seekHelper
should be the only possible behavior change. It seems to test as
behaving the same.

Note that seekHelper dummies up the SeekInput in the case where
segmentPaths' gives up on sorting the expanded paths because there are
too many input paths. When SeekInput later gets exposed as a json field,
that will result in it being a little bit wrong in the case where
100 or more paths are passed to a git-annex command. I think this is a
subtle enough problem to not matter. If it does turn out to be a
problem, fixing it would require splitting up the input
parameters into groups of < 100, which would make git ls-files run
perhaps more than is necessary. May want to revisit this, because that
fix seems fairly low-impact.
2020-09-15 15:41:13 -04:00
Joey Hess
6ea511beb4
Removed the S3 and WebDAV build flags
So these special remotes are always supported.

IIRC these build flags were added because the dep chains were a bit too
long, or perhaps because the libraries were not available in Debian stable,
or something like that. That was long ago, those reasons no longer apply,
and users get confused when builtin special remotes are not available, so
it seems best to remove the build flags now.

If this does cause a problem it can be reverted of course..

This commit was sponsored by Jochen Bartl on Patreon.
2020-09-08 12:42:59 -04:00
Joey Hess
6361f7c310
make removeAuthorizedKeys robust if the file DNE
Noticed this could potentially crash, although the only thing using it
would normally create the file first, if something then deleted it..
2020-09-02 14:37:42 -04:00
Joey Hess
f75be32166
external backends wip
It's able to start them up, the only thing not implemented is generating
and verifying keys. And, the key translation for HasExt.
2020-07-29 15:23:18 -04:00
Joey Hess
2a45b5ae9a
avoid failure to lock content of removed file causing drop etc to fail
This was already prevented in other ways, but as seen in commit
c30fd24d91, those were a bit fragile.
And I'm not sure races were avoided in every case before. At least a
race between two separate git-annex processes, dropping the same
content, seemed possible.

This way, if locking fails, and the content is not present, it will
always do the right thing. Also, it avoids the overhead of an unncessary
inAnnex check for every file.

This commit was sponsored by Denis Dzyubenko on Patreon.
2020-07-25 11:59:33 -04:00
Joey Hess
7a42a47902
renaming 2020-07-10 14:17:35 -04:00
Joey Hess
41952204ce
S3: The REDUCED_REDUNDANCY storage class is no longer cheaper
So stop documenting it, and stop offering it as a choice in the assistant.

Removed the code that parses it into S3.ReducedRedundancy, because
S3.OtherStorageClass with the value will work just the same and avoids a
special case for a deprecated this.
2020-06-16 12:04:29 -04:00
Joey Hess
660d8d3a87
simpler way to do this
Remove old code that can be trivially implemented using async in a much
nicer way (that is async exception safe).

I've audited all forkOS calls (except for ones in the assistant),
and this was the last remaining one that is not async exception safe.
The rest look ok to me.
2020-06-05 14:18:06 -04:00
Joey Hess
2670890b17
convert to withCreateProcess for async exception safety
This handles all createProcessSuccess callers, and aside from process
pools, the complete conversion of all process running to async exception
safety should be complete now.

Also, was able to remove from Utility.Process the old API that I now
know was not a good idea. And proof it was bad: The code size went *down*,
despite there being a fair bit of boilerplate for some future API to
reduce.
2020-06-04 15:45:52 -04:00
Joey Hess
438dbe3b66
convert to withCreateProcess for async exception safety
This handles all sites where checkSuccessProcess/ignoreFailureProcess
is used, except for one: Git.Command.pipeReadLazy
That one will be significantly more work to convert to bracketing.

(Also skipped Command.Assistant.autoStart, but it does not need to
shut down the processes it started on exception because they are
git-annex assistant daemons..)

forceSuccessProcess is done, except for createProcessSuccess.
All call sites of createProcessSuccess will need to be converted
to bracketing.

(process pools still todo also)
2020-06-04 12:44:09 -04:00
Joey Hess
31d53587d5
generalize withNullHandle to MonadIO 2020-06-03 15:18:48 -04:00
Joey Hess
89b2542d3c
annex.skipunknown with transition plan
Added annex.skipunknown git config, that can be set to false to change the
behavior of commands like `git annex get foo*`, to not skip over files/dirs
that are not checked into git and are explicitly listed in the command
line.

Significant complexity was needed to handle git-annex add, which uses some
git ls-files calls, but needs to not use --error-unmatch because of course
the files are not known to git.

annex.skipunknown is planned to change to default to false in a
git-annex release in early 2022. There's a todo for that.
2020-05-28 15:55:17 -04:00
Joey Hess
484a74f073
auto-init autoenable=yes
Try to enable special remotes configured with autoenable=yes when git-annex
auto-initialization happens in a new clone of an existing repo. Previously,
git-annex init had to be explicitly run to enable them. That was a bit of a
wart of a special case for users to need to keep in mind.

Special remotes cannot display anything when autoenabled this way, to avoid
interfering with the output of git-annex query commands.

Any error messages will be hidden, and if it fails, nothing is displayed.
The user will realize the remote isn't enable when they try to use it,
and can run git-annex init manually then to try the autoenable again and
see what failed.

That seems like a reasonable approach, and it's less complicated than
communicating something across a pipe in order to display it as a side
message. Other reason not to do that is that, if the first command the
user runs is one like git-annex find that has machine readable output,
any message about autoenable failing would need to not be displayed anyway.
So better to not display a failure message ever, for consistency.

(Had to split out Remote.List.Util to avoid an import cycle.)
2020-05-27 12:40:35 -04:00
Joey Hess
a7840c0e04
improve programPath
Fixes a failure mode where git-annex sync would try to run git-annex and
complain that it failed to find it in ~/.config/git-annex/program or PATH,
when there was a git-annex in /usr/bin/, but the original one was run
from elsewhere (eg, ~/bin) and happened not to be present any longer.

Now, it will fall back to using git-annex from PATH in such a case.
Which might fail due to some version incompatability, but still better
than a misleading error message.

Also made readProgramFile only read the file, not look for git-annex in
PATH as a fallback. That fallback may have confused Assistant.Upgrade,
which really wants the value from the file.
2020-04-15 16:46:34 -04:00
Joey Hess
43a9808292
disable journal read optimisation when alwayscommit=false
The journal read optimisation in aeca7c220 later got fixed in eedd73b84
to stage and commit any files that were left in the journal by a
previous git-annex run. That's necessary for the optimisation to work
correctly. But it also meant that alwayscommit=false started committing
the previous git-annex processes journalled changes, which defeated the
purpose of the config setting entirely.

So, disable the optimisation when alwayscommit=false, leaving the
files in the journal and not committing them. See my comments on the bug
report for why this seemed the best approach.

Also fixes a problem when annex.merge-annex-branches=false and there
are changes in the journal. That config indirectly prevents committing
the journal. (Which seems a bit odd given its name, but it always has..)
So, when there were changes in the journal, perhaps left there due to
alwayscommit=false being set before, the optimisation would prevent
git-annex from reading the journal files, and it would operate with out
of date information.
2020-04-15 13:24:33 -04:00
Joey Hess
c0cd07c36b
Ref ByteString conversion done
Test suite passes.
2020-04-07 17:41:09 -04:00
Joey Hess
87d5583a91
use programPath consistently, not readProgramFile
Improve git-annex's ability to find the path to its program, especially
when it needs to run itself in another repo to upgrade it.

Some parts of the code used readProgramFile, probably because I forgot that
programPath exists.

I noticed this when a git-annex auto-upgrade failed because it was running
git-annex upgrade --autoonly, but the code to run git-annex used
readProgramFile, which happened to point to an older build of git-annex.
2020-03-30 16:06:27 -04:00
Joey Hess
4b92bbe8d7
webdav: Made exporttree remotes faster by caching connection to the server
Followed example of Remote.S3.
2020-03-20 12:48:43 -04:00
Joey Hess
093fde5abd
completed the createDirectoryIfMissing conversion
Remaining calls in the assistant and Annex.Ssh have been audited and are ok.
2020-03-06 12:55:03 -04:00
Joey Hess
eaa49ab53d
convert replaceFile to createDirectoryUnder
Since it was used on both worktree and .git/annex files, split into
multiple functions.

In passing, this also improves permissions of created directories in
.git/annex, using createAnnexDirectory on those.
2020-03-06 11:31:01 -04:00
Joey Hess
81e3faf810
Merge branch 'v7' 2020-02-26 18:15:18 -04:00
Joey Hess
8af6d2c3c5
fix encryption of content to gcrypt and git-lfs
Fix serious regression in gcrypt and encrypted git-lfs remotes.
Since version 7.20200202.7, git-annex incorrectly stored content
on those remotes without encrypting it.

Problem was, Remote.Git enumerates all git remotes, including git-lfs
and gcrypt. It then dispatches to those. So, Remote.List used the
RemoteConfigParser from Remote.Git, instead of from git-lfs or gcrypt,
and that parser does not know about encryption fields, so did not
include them in the ParsedRemoteConfig. (Also didn't include other
fields specific to those remotes, perhaps chunking etc also didn't
get through.)

To fix, had to move RemoteConfig parsing down into the generate methods
of each remote, rather than doing it in Remote.List.

And a consequence of that was that ParsedRemoteConfig had to change to
include the RemoteConfig that got parsed, so that testremote can
generate a new remote based on an existing remote.

(I would have rather fixed this just inside Remote.Git, but that was not
practical, at least not w/o re-doing work that Remote.List already did.
Big ugly mostly mechanical patch seemed preferable to making git-annex
slower.)
2020-02-26 18:05:36 -04:00
Joey Hess
c31e1be781
convert KeySource to RawFilePath 2020-02-21 10:04:44 -04:00
Joey Hess
79a0435b77
automate remote.name.skipFetchAll
initremote, enableremote: Set remote.name.skipFetchAll when the remote
cannot be fetched from by git, so git fetch --all will not try to use it.
2020-02-19 13:58:26 -04:00
Joey Hess
69f2d1dd43
remoteConfig rework
remoteAnnexConfig will avoid bugs like
a3a674d15b

Use now more generic remoteConfig in a couple places that built
non-annex config settings manually before.
2020-02-19 13:45:11 -04:00
Joey Hess
a78eb6dd58
sync --only-annex and annex.synconlyannex
* Added sync --only-annex, which syncs the git-annex branch and annexed
  content but leaves managing the other git branches up to you.
* Added annex.synconlyannex git config setting, which can also be set with
  git-annex config to configure sync in all clones of the repo.

Use case is then the user has their own git workflow, and wants to use
git-annex without disrupting that, so they sync --only-annex to get the
git-annex stuff in sync in addition to their usual git workflow.

When annex.synconlyannex is set, --not-only-annex can be used to override
it.

It's not entirely clear what --only-annex --commit or --only-annex
--push should do, and I left that combination not documented because I
don't know if I might want to change the current behavior, which is that
such options do not override the --only-annex. My gut feeling is that
there is no good reasons to use such combinations; if you want to use
your own git workflow, you'll be doing your own committing and pulling
and pushing.

A subtle question is, how should import/export special remotes be handled?
Importing updates their remote tracking branch and merges it into master.
If --only-annex prevented that git branch stuff, then it would prevent
exporting to the special remote, in the case where it has changes that
were not imported yet, because there would be a unresolved conflict.

I decided that it's best to treat the fact that there's a remote tracking
branch for import/export as an implementation detail in this case. The more
important thing is that an import/export special remote is entirely annexed
content, and so it makes a lot of sense that --only-annex will still sync
with it.
2020-02-17 16:33:10 -04:00
Joey Hess
99cb3e75f1
add LISTCONFIGS to external special remote protocol
Special remote programs that use GETCONFIG/SETCONFIG are recommended
to implement it.

The description is not yet used, but will be useful later when adding a way
to make initremote list all accepted configs.

configParser now takes a RemoteConfig parameter. Normally, that's not
needed, because configParser returns a parter, it does not parse it
itself. But, it's needed to look at externaltype and work out what
external remote program to run for LISTCONFIGS.

Note that, while externalUUID is changed to a Maybe UUID, checkExportSupported
used to use NoUUID. The code that now checks for Nothing used to behave
in some undefined way if the external program made requests that
triggered it.

Also, note that in externalSetup, once it generates external,
it parses the RemoteConfig strictly. That generates a
ParsedRemoteConfig, which is thrown away. The reason it's ok to throw
that away, is that, if the strict parse succeeded, the result must be
the same as the earlier, lenient parse.

initremote of an external special remote now runs the program three
times. First for LISTCONFIGS, then EXPORTSUPPORTED, and again
LISTCONFIGS+INITREMOTE. It would not be hard to eliminate at least
one of those, and it should be possible to only run the program once.
2020-01-17 16:07:17 -04:00
Joey Hess
fa28b51206
fix build of webapp 2020-01-15 13:47:31 -04:00
Joey Hess
b7e37334fe
fix build of assistant 2020-01-15 13:19:02 -04:00
Joey Hess
71ecfbfccf
be stricter about rejecting invalid configurations for remotes
This is a first step toward that goal, using the ProposedAccepted type
in RemoteConfig lets initremote/enableremote reject bad parameters that
were passed in a remote's configuration, while avoiding enableremote
rejecting bad parameters that have already been stored in remote.log

This does not eliminate every place where a remote config is parsed and a
default value is used if the parse false. But, I did fix several
things that expected foo=yes/no and so confusingly accepted foo=true but
treated it like foo=no. There are still some fields that are parsed with
yesNo but not not checked when initializing a remote, and there are other
fields that are parsed in other ways and not checked when initializing a
remote.

This also lays groundwork for rejecting unknown/typoed config keys.
2020-01-10 14:52:48 -04:00
Joey Hess
686791c4ed
more RawFilePath
Remove dup definitions and just use the RawFilePath one. </> etc are
enough faster that it's probably faster than building a String directly,
although I have not benchmarked.
2019-12-18 17:10:28 -04:00
Joey Hess
c19211774f
use filepath-bytestring for annex object manipulations
git-annex find is now RawFilePath end to end, no string conversions.
So is git-annex get when it does not need to get anything.
So this is a major milestone on optimisation.

Benchmarks indicate around 30% speedup in both commands.

Probably many other performance improvements. All or nearly all places
where a file is statted use RawFilePath now.
2019-12-11 15:25:07 -04:00
Joey Hess
bdec7fed9c
convert TopFilePath to use RawFilePath
Adds a dependency on filepath-bytestring, an as yet unreleased fork of
filepath that operates on RawFilePath.

Git.Repo also changed to use RawFilePath for the path to the repo.

This does eliminate some RawFilePath -> FilePath -> RawFilePath
conversions. And filepath-bytestring's </> is probably faster.
But I don't expect a major performance improvement from this.
This is mostly groundwork for making Annex.Location use RawFilePath,
which will allow for a conversion-free pipleline.
2019-12-09 15:07:21 -04:00
Joey Hess
3266ad3ff7
everything is building again
However, the test suite fails some quickchecks, so this branch is not
yet in a mergeable state.
2019-12-05 15:10:23 -04:00
Joey Hess
81d402216d cache the serialization of a Key
This will speed up the common case where a Key is deserialized from
disk, but is then serialized to build eg, the path to the annex object.

Previously attempted in 4536c93bb2
and reverted in 96aba8eff7.
The problems mentioned in the latter commit are addressed now:

Read/Show of KeyData is backwards-compatible with Read/Show of Key from before
this change, so Types.Distribution will keep working.

The Eq instance is fixed.

Also, Key has smart constructors, avoiding needing to remember to update
the cached serialization.

Used git-annex benchmark:
  find is 7% faster
  whereis is 3% faster
  get when all files are already present is 5% faster
Generally, the benchmarks are running 0.1 seconds faster per 2000 files,
on a ram disk in my laptop.
2019-11-22 17:49:16 -04:00
Joey Hess
890330f0fe
make --json-error-messages capture url download errors
Convert Utility.Url to return Either String so the error message can be
displated in the annex monad and so captured.

(When curl is used, its errors are still not caught.)
2019-11-12 13:52:38 -04:00
Joey Hess
9e8d40181f
remove some unncessary uses of warningIO
warningIO is not concurrent output safe, and it doesn't go to
--json-error-messages

There are a few more that would be too hard to remove, and there are also
several dozen direct prints to stderr still.
2019-11-12 10:07:27 -04:00
Joey Hess
0be23bae2f
refactor
Better to not have a single function module, and better to have a more
specific type than Bool.

This commit was sponsored by Jack Hill on Patreon
2019-11-11 19:10:52 -04:00