Commit graph

403 commits

Author SHA1 Message Date
Joey Hess
13260ccc3a undo command
This commit was sponsored by Andrew Cant.
2014-11-14 14:41:07 -04:00
Joey Hess
c5ca0dc543 simplify 2014-11-12 15:57:38 -04:00
Joey Hess
864086a956 proxy: for all your direct mode repository munging needs
This allows bypassing the direct mode guard in a safe way to do all sorts
of things including git revert, git mv, git checkout ...

This commit was sponsored by the WikiMedia Foundation.
2014-11-12 15:51:46 -04:00
Joey Hess
bf2b029c49 comment typo 2014-11-10 15:38:31 -04:00
Joey Hess
adc5ca70a8 pre-commit: Block partial commit of unlocked annexed file, since that left a typechange staged in index
I had hoped that the git devs could change git's handling of partial
commits to not use a false index file, but seems not.

So, this relies on some git internals to detect that case. The test suite
has a test case added to catch it if changes to git break it.

This commit was sponsored by Paul Tagliamonte.
2014-11-10 15:36:24 -04:00
Joey Hess
20a497b181 move remote removal into separate module
This allows using Git.Remote w/o needing to have Git.BuildVersion, which
requires configure. It will simplify github-backup when these libraries are
used there.
2014-10-27 11:28:58 -04:00
Joey Hess
1e59df083d Use haskell setenv library to clean up several ugly workarounds for inability to manipulate the environment on windows.
Didn't know that this library existed!

This includes making git-annex not re-exec itself on start on windows, and
making the test suite on Windows run tests without forking.
2014-10-15 20:33:52 -04:00
Joey Hess
c6e9125c61 repair: Prevent auto gc from happening when fetching from a remote. 2014-10-12 14:27:46 -04:00
Joey Hess
9fd95d9025 indent with tabs not spaces
Found these with:
git grep "^  " $(find -type  f -name \*.hs) |grep -v ':  where'

Unfortunately there is some inline hamlet that cannot use tabs for
indentation.

Also, Assistant/WebApp/Bootstrap3.hs is a copy of a module and so I'm
leaving it as-is.
2014-10-09 15:09:26 -04:00
Joey Hess
7b50b3c057 fix some mixed space+tab indentation
This fixes all instances of " \t" in the code base. Most common case
seems to be after a "where" line; probably vim copied the two space layout
of that line.

Done as a background task while listening to episode 2 of the Type Theory
podcast.
2014-10-09 15:09:11 -04:00
Joey Hess
11f111bf1a Fix parsing of ipv6 address in git remote address when it was not formatted as an url. 2014-09-10 14:17:02 -04:00
Joey Hess
b874f84086 New annex.hardlink setting. Closes: #758593
* New annex.hardlink setting. Closes: #758593
* init: Automatically detect when a repository was cloned with --shared,
  and set annex.hardlink=true, as well as marking the repository as
  untrusted.

Had to reorganize Logs.Trust a bit to avoid a cycle between it and
Annex.Init.
2014-09-05 13:44:09 -04:00
Joey Hess
4405650828 Fix handing of autocorrection when running outside a git repository.
Old behavior was to take the first fuzzy match. Now, it checks the globa
git config, and runs the normal fuzzy handling, including failing to run a
semi-random command by default.
2014-08-23 16:51:33 -07:00
Joey Hess
c784ef4586 unify exception handling into Utility.Exception
Removed old extensible-exceptions, only needed for very old ghc.

Made webdav use Utility.Exception, to work after some changes in DAV's
exception handling.

Removed Annex.Exception. Mostly this was trivial, but note that
tryAnnex is replaced with tryNonAsync and catchAnnex replaced with
catchNonAsync. In theory that could be a behavior change, since the former
caught all exceptions, and the latter don't catch async exceptions.

However, in practice, nothing in the Annex monad uses async exceptions.
Grepping for throwTo and killThread only find stuff in the assistant,
which does not seem related.

Command.Add.undo is changed to accept a SomeException, and things
that use it for rollback now catch non-async exceptions, rather than
only IOExceptions.
2014-08-07 22:03:29 -04:00
Joey Hess
000dd42ac4 improve repair of bad branches
The repair code assumed that if fsck found no broken objects, after
removing bad objects and possibly pulling replacements from remote, all was
well.. but this is not really true. Removing bad objects could leave some
branches broken. fsck doesn't report any missing objects in this case,
and its messages about broken branches are ignored by the fsck output
parser.

To deal with this, added a separate scan of all refs to find broken ones
and remove them when --forced. This will also let anyone who ran into this
bug run repair again to fix up the incomplete repair done before.

This commit was sponsored by Aaron Whitehouse.
2014-07-21 18:42:58 -04:00
Joey Hess
ec5ed2af9d Set gcrypt-publish-participants when setting up a gcrypt repository, to avoid unncessary passphrase prompts.
This is a security/usability tradeoff. To avoid exposing the gpg key ids
who can decrypt the repository, users can unset
gcrypt-publish-participants.

The gcrypt-publish-participants option is available in my fork of
git-remote-gcrypt.

This commit was sponsored by Christopher Kernahan.
2014-07-15 17:33:14 -04:00
Joey Hess
eef8e8c51a Fix git version that supported --no-gpg-sign.
This is weird, git describe said the commit landed in 1.8.5, but 1.9.3 does
not have it on OSX. Assume 2.0.0.
2014-07-08 12:46:15 -04:00
Joey Hess
1c1f463c3a
avoid using --no-gpg-sign with old versions of git
and refactor some
2014-07-04 13:49:12 -04:00
Joey Hess
fc67925fd7
reorg
avoid Git.Command needing Utility.Batch which needs async

For github-backup etc
2014-07-04 12:18:49 -04:00
Joey Hess
d41849bc23
support commit.gpgsign
Support users who have set commit.gpgsign, by disabling gpg signatures for
git-annex branch commits and commits made by the assistant.

The thinking here is that a user sets commit.gpgsign intending the commits
that they manually initiate to be gpg signed. But not commits made in the
background, whether by a deamon or implicitly to the git-annex branch.
gpg signing those would be at best a waste of CPU and at worst would fail,
or flood the user with gpg passphrase prompts, or put their signature on
changes they did not directly do.

See Debian bug #753720.

Also makes all commits done by git-annex go through a few central control
points, to make such changes easier in future.

Also disables commit.gpgsign in the test suite.

This commit was sponsored by Antoine Boegli.
2014-07-04 11:53:51 -04:00
Joey Hess
986bf1d6f6 Fix bug in annex.queuesize calculation that caused much more queue flushing than necessary.
The bug caused the size of the queue to be miscalculted; it was doubled
each time an item was added. Commands run after approx 140 items rather
than the intended 10240!
2014-06-18 17:23:36 -04:00
Joey Hess
fbd5a67cba fix a test suite reversion on Windows
Forgot to pass gitEnv when running commands in the git queue on windows.
2014-06-12 18:37:12 -04:00
Joey Hess
a44fd2c019 export CreateProcess fields from Utility.Process
update code to avoid cwd and env redefinition warnings
2014-06-10 19:20:14 -04:00
Joey Hess
d6711800ad avoid bad commits after interrupted direct mode sync (or merge)
It was possible for a interrupted sync or merge in direct mode to
leave the work tree out of sync with the last recorded commit.
This would result in the next commit seeing files missing from the work
tree, and committing their removal.

Now, a direct mode merge happens not only in a throwaway work tree, but using
a temporary index file, and without any commits or index changes
being made until the real work tree has been updated. If the merge is
interrupted, the work tree may have some updated files, but worst case a
commit will redundantly commit changes that come from the merge.

This commit was sponsored by Tony Cantor.
2014-06-09 19:40:28 -04:00
Joey Hess
138d25518d Merge branch 'master' into remotecontrol
Conflicts:
	doc/devblog/day_152__more_ssh_connection_caching.mdwn
2014-04-14 13:38:35 -04:00
Joey Hess
e53a85743e
adjust to not use cpp in modules used by configure 2014-04-14 13:37:12 -04:00
Joey Hess
f67d5abc41 support gcrypt remotes (assuming them to be over ssh transport) 2014-04-08 16:16:46 -04:00
Joey Hess
43909723b3 added git-annex remotedaemon
So far, handling connecting to git-annex-shell notifychanges, and
pulling immediately when a change is pushed to a remote.

A little bit buggy (crashes after the first pull), but it already works!

This commit was sponsored by Mark Sheppard.
2014-04-06 19:10:23 -04:00
Joey Hess
1052eeface Windows: Fix some filename encoding bugs.
http://git-annex.branchable.com/bugs/Unicode_file_names_ignored_on_Windows/

Not a complete fix yet.
2014-03-19 15:57:56 -04:00
Joey Hess
67f09bca6d fully fix fsck memory use by iterative fscking
Not very well tested, but I'm sure it doesn't eg, loop forever.
2014-03-12 15:18:43 -04:00
Joey Hess
475bf70af6 read stdout and stderr concurrently
Avoids any buffering-related blocking.
2014-03-12 13:54:29 -04:00
Joey Hess
85d13b4302 better streaming when cleaning up corrupt objects
A repo with a lot of objects will now stream them through, rather than
buffering a list of them all in memory.
2014-03-10 16:36:18 -04:00
Joey Hess
0e0d396b27 Improve memory usage when git fsck finds a great many broken objects.
From 1.7 gb to 900 mb on 300 thousand unique reported shas.

When shas are not unique, this streams much better than before, so won't
buffer the full list before putting them into the Set and throwing away
dups. And when fsck output includes ignorable lines, especially
dangling object lines, they won't be buffered in memory at all.
2014-03-10 15:14:09 -04:00
Joey Hess
8496d8aa63
improved direct mode dir/file conflicted merge resultion, using tree grafting 2014-03-04 15:00:19 -04:00
Joey Hess
1192d98721 sync: Fix bug in direct mode that caused a file not checked into git to be deleted when merging with a remote that added a file by the same name. (Thanks, jkt) 2014-03-03 14:57:16 -04:00
Joey Hess
d0fce426c4 pre-commit-annex hook script to automatically extract metadata from lots of types of files
Using the extract(1) program to do the heavy lifting.

Decided to make git-annex run pre-commit-annex when committing. Since
git-annex pre-commit also runs it, it'll be run when git commit is run too,
via the pre-commit hook. This basically gives back the pre-commit hook
that git-annex took away. The implementation avoids repeatedly looking
for the hook script when the assistant is running and committing
repeatedly; only checks if the hook is available once.

To make the script simpler, made git-annex metadata -s field?=value
only set a field when it's not already got a value.

This commit was sponsored by bak.
2014-03-02 20:11:58 -04:00
Joey Hess
f8cfcd4e44 couple more warning fixes 2014-02-25 14:53:43 -04:00
Joey Hess
3f6e4b8c7c fix all remaining -Wall warnings on Windows 2014-02-25 14:48:50 -04:00
Joey Hess
46cc39f1a4 repair: Optimise unpacking of pack files, and avoid repeated error messages about corrupt pack files. 2014-02-24 19:36:58 -04:00
Joey Hess
4e0be2792b remove Read instance for Ref
Removed instance, got it all to build using fromRef. (With a few things
that really need to show something using a ref for debugging stubbed out.)

Then added back Read instance, and made Logs.View use it for serialization.
This changes the view log format.
2014-02-19 01:19:57 -04:00
Joey Hess
67fd06af76 add git annex view command
(And a vpop command, which is still a bit buggy.)

Still need to do vadd and vrm, though this also adds their documentation.

Currently not very happy with the view log data serialization. I had to
lose the TDFA regexps temporarily, so I can have Read/Show instances of
View. I expect the view log format will change in some incompatable way
later, probably adding last known refs for the parent branch to View
or something like that.

Anyway, it basically works, although it's a bit slow looking up the
metadata. The actual git branch construction is about as fast as it can be
using the current git plumbing.

This commit was sponsored by Peter Hogg.
2014-02-18 18:22:20 -04:00
Joey Hess
9633c67842 filter branches (incomplete)
Promosing work toward metadata driven filter branches. A few methods
to construct them are stubbed out; all the data types and pure code
seems good.

This commit was sponsored by Walter Somerville.
2014-02-16 17:39:54 -04:00
Joey Hess
61ecf76644 unbreak the build 2014-02-12 14:34:01 -04:00
Joey Hess
029a1c431a
remove windows --git-dir unix style path hack
This is no longer necessary, at least with msysgit 1.8.5.2.msysgit.0.
Its root cause may have been fixed by other recent git path fixes.
It was causing the webapp to fail to make repos on other drives.
2014-02-11 16:12:22 -04:00
Joey Hess
c95d0cf7a8 Windows: Fix handling of absolute unix-style git repository paths.
Note that on Windows a remote with a path like /home/foo/bar
is interpreted by git as being some screwy relative path (relative to what
exactly seems ill-defined -- it seemed relative to C:\Program Files\Git\ in
my tests!) So no attempt has been made to handle such a path sanely, just not
to crash when encountering it.

Note that "C:\\foo" </> "/home/foo/bar" yields /home/foo/bar even though
that is not absolute! I don't know what to make of all this,
except that I will be very happy when this crock of **** vanishes from
the face of the earth.
2014-02-08 15:39:04 -04:00
Joey Hess
92edee0b04 remove workaround
This was needed when absNormPath was not being used on Windows, since path
normalization includes removing ./
2014-02-08 14:47:57 -04:00
Joey Hess
a44e01c29c --in can now refer to files that were located in a repository at some past date. For example, --in="here@{yesterday}" 2014-02-06 12:43:56 -04:00
Joey Hess
ed7c61914c assistant: Run the periodic git gc in batch mode. 2014-01-22 17:11:41 -04:00
Joey Hess
78ead70ea4 repair: Check git version at run time. 2014-01-21 13:22:48 -04:00
Joey Hess
4e19e87921 repair: Fix bug in packed refs file exploding code that caused a .gitrefs directory to be created instead of .git/refs 2014-01-15 16:34:18 -04:00
Joey Hess
5e6e89f423 repair: Support old git versions from before git fsck --no-dangling was implemented. 2014-01-13 18:10:45 -04:00
Joey Hess
858eb26303 Avoid looping if long-running git cat-file or git hash-object crashes and keeps crashing when restarted. 2014-01-01 21:42:25 -04:00
Joey Hess
49aad120b9 Windows: Fix bug in direct mode merge code that could cause files in subdirectories to go missing. 2013-12-31 16:39:11 -04:00
Richard Hartmann
974fe009bf Another round of s/amoung/among/ 2013-12-19 12:30:53 -04:00
Joey Hess
c99d6a8151 assistant: Fix OSX-specific bug that caused the startup scan to try to follow symlinks to other directories, and add their contents to the annex. 2013-12-18 15:05:29 -04:00
Joey Hess
625076f9a5 status: Ignore new files that are gitignored. 2013-12-12 14:01:24 -04:00
Joey Hess
e6c4f550d8 repair: Remove damaged git-annex sync branches. 2013-12-10 16:17:49 -04:00
Joey Hess
b37323d857 update 2013-12-10 15:48:24 -04:00
Joey Hess
c0ce3269e9 accidentially committed wrong version of file 2013-12-10 15:45:22 -04:00
Joey Hess
ce045a51af Improve repair of git-annex index file.
Fixes a test case I received where a corrupted repo was repaired, but the
git-annex branch was not. The root of the problem was that the
MissingObject returned by the repair code was not necessarily a complete
set of all objects that might have been deleted during the repair.

So, stop trying to return that at all, and instead make the index file
checking code explicitly verify that each object the index uses is present.
2013-12-10 15:40:01 -04:00
Joey Hess
c717905d15 work around msysgit very strange behavior on ./ or .\ at start of path
Seems that verify_path() rejects such a path on Windows, but I cannot see
why. Git bug?
2013-12-04 23:49:18 -04:00
Joey Hess
4882a611e5 assistant: Batch jobs are now run with ionice and nocache, when those commands are available. 2013-12-01 14:53:15 -04:00
Joey Hess
03932212ec Avoid using git commit in direct mode, since in some situations it will read the full contents of files in the tree.
The assistant's commit code also always avoids git commit, for simplicity.
Indirect mode sync still does a git commit -a to catch unstaged changes.

Note that this means that direct mode sync no longer runs the pre-commit
hook or any other hooks git commit might call. The git annex pre-commit
hook action for direct mode is however explicitly run. (The assistant
already ran git commit with hooks disabled, so no change there.)
2013-12-01 13:59:45 -04:00
Joey Hess
6edac746f0 merge improved fsck types from git-repair and some associated changes 2013-11-30 14:29:11 -04:00
Joey Hess
0980f3dae6 Fix bug that broke switching between local repositories in the webapp when they use the new guarded direct mode.
git treats eg ~/annex as a bare git repository located in ~/.annex/.git
if ~/annex/.git/config has core.bare=true.
2013-11-22 23:27:15 -04:00
Joey Hess
d490bbb891 make runRepairOf run preRepair
This may be a little late, since a fsck has already been done,
but it can't hurt.
2013-11-21 20:13:55 -04:00
Joey Hess
7d682dd844 merge from git-repair 2013-11-21 20:07:44 -04:00
Joey Hess
ff2b0a9df6 merge from git-repair 2013-11-21 00:43:30 -04:00
Joey Hess
8217e97d88 merge from git-repair 2013-11-20 19:34:30 -04:00
Joey Hess
e80d935b53 merge from git-repair 2013-11-20 19:16:42 -04:00
Joey Hess
8a466247ed merge from git-repair 2013-11-20 18:45:22 -04:00
Joey Hess
7dbb702edd merge from git-repair 2013-11-20 18:31:00 -04:00
Joey Hess
ef34316c45 fix repair failure that occurred when index was corrupted, and other objects too
In this case, the index problem prevented fsck from finding the other
problems.
2013-11-19 17:16:33 -04:00
Joey Hess
b1ed98636b merge with git-repair 2013-11-19 17:08:57 -04:00
Joey Hess
b245aa40df moving git-repair to its own package 2013-11-18 13:24:55 -04:00
Joey Hess
eab4470440 better handling of missing index file 2013-11-13 14:39:26 -04:00
Joey Hess
13108b7196 assistant: Notice on startup when the index file is corrupt, and auto-repair. 2013-11-13 14:27:17 -04:00
Joey Hess
5e7e0c7dc0 repair: Handle case where index file is corrupt, but all objects are ok. 2013-11-13 13:41:02 -04:00
Joey Hess
958312885f webapp: Improve UI around remote that have no annex.uuid set, either because setup of them is incomplete, or because the remote git repository is not a git-annex repository.
Complicated by such repositories potentially being repos that should have
an annex.uuid, but it failed to be gotten, perhaps due to the past ssh repo
setup bugs. This is handled now by an Upgrade Repository button.
2013-11-07 18:02:00 -04:00
Joey Hess
59ecc804cd add new status command
This works for both direct and indirect mode.

It may need some performance tuning.

Note that unlike git status, it only shows the status of the work tree, not
the status of the index. So only one status letter, not two .. and since
files that have been added and not yet committed do not differ between the
work tree and the index, they are not shown. Might want to add display of
the index vs the last commit eventually.

This commit was sponsored by an unknown bitcoin contributor, whose
contribution as been going up lately! ;)
2013-11-07 14:07:25 -04:00
Joey Hess
3802f2f270 work around lack of receive.denyCurrentBranch in direct mode
Now that direct mode sets core.bare=true, git's normal prohibition about
pushing into the currently checked out branch doesn't work.

A simple fix for this would be an update hook which blocks the pushes..
but git hooks must be executable, and git-annex needs to be usable on eg,
FAT, which lacks x bits.

Instead, enabling direct mode switches the branch (eg master) to a special
purpose branch (eg annex/direct/master). This branch is not pushed when
syncing; instead any changes that git annex sync commits get written to
master, and it's pushed (along with synced/master) to the remote.

Note that initialization has been changed to always call setDirect,
even if it's just setDirect False for indirect mode. This is needed because
if the user has just cloned a direct mode repo, that nothing has synced
with before, it may have no master branch, and only a annex/direct/master.
Resulting in that branch being checked out locally too. Calling setDirect False
for indirect mode moves back out of this branch, to a new master branch,
and ensures that a manual "git push" doesn't push changes directly to
the annex/direct/master of the remote. (It's possible that the user
makes a commit w/o using git-annex and pushes it, but nothing I can do
about that really.)

This commit was sponsored by Jonathan Harrington.
2013-11-05 21:08:31 -04:00
Joey Hess
cf34e59c8c factor out update 2013-11-05 18:20:52 -04:00
Joey Hess
4510819215 v5 for direct mode, with automatic upgrade
This includes storing the current state of the HEAD ref, which git annex
sync is going to need, but does not make sync use it.
2013-11-05 17:05:03 -04:00
Joey Hess
04768e44b2 automatically set and unset core.bare when switching to/from direct mode 2013-11-05 15:41:24 -04:00
Joey Hess
0edd9ec03a refactored hook setup 2013-11-05 15:29:56 -04:00
Joey Hess
c2862d9585 pass -c option on to all git commands run
The -c option now not only modifies the git configuration seen by
git-annex, but it is passed along to every git command git-annex runs.

This was easy to plumb through because gitCommandLine is already used to
construct every git command line, to add --git-dir and --work-tree
2013-11-05 13:38:37 -04:00
Joey Hess
58db042033 map: Work when there are gcrypt remotes. 2013-11-04 14:14:44 -04:00
Joey Hess
7ed8e87a34 assistant: Support repairing git remotes that are locally accessible
(eg, on removable drives)

gcrypt remotes are not yet handled.

This commit was sponsored by Sören Brunk.
2013-10-27 15:38:59 -04:00
Joey Hess
0036139b33 wire git repair into webapp 2013-10-23 14:43:58 -04:00
Joey Hess
1ab2ad86c7 minor 2013-10-23 13:19:37 -04:00
Joey Hess
435ea52f3c repair command: add handling of git-annex branch and index 2013-10-23 13:00:45 -04:00
Joey Hess
d5eb85acf4 add repair command 2013-10-23 12:21:59 -04:00
Joey Hess
d345e5b52f add git fsck to cronner, and UI for repository repair (not yet wired up) 2013-10-22 16:02:52 -04:00
Joey Hess
44bb9a808f clean warnings 2013-10-22 14:52:17 -04:00
Joey Hess
ff3f654cbe make git fsck batch-capable 2013-10-22 14:49:41 -04:00
Joey Hess
3e61749d08 index file recovery 2013-10-22 12:58:04 -04:00
Joey Hess
2fb08acda5 add reflog 2013-10-21 16:41:46 -04:00
Joey Hess
18487c779f corrupt branch resetting (but not yet reflog walking) 2013-10-21 16:20:54 -04:00
Joey Hess
fcd91be6f0 implemented removal of corrupt tracking branches
Oh, git, you made this so hard. Not determining if a branch pointed to some
corrupt object, that was easy, but dealing with corrupt branches using git
plumbing is a PITA.
2013-10-21 15:28:06 -04:00
Joey Hess
6d8250c255 avoid redundant fsck when no changes are made 2013-10-20 19:42:17 -04:00