This does not change the overall license of the git-annex program, which
was already AGPL due to a number of sources files being AGPL already.
Legally speaking, I'm adding a new license under which these files are
now available; I already released their current contents under the GPL
license. Now they're dual licensed GPL and AGPL. However, I intend
for all my future changes to these files to only be released under the
AGPL license, and I won't be tracking the dual licensing status, so I'm
simply changing the license statement to say it's AGPL.
(In some cases, others wrote parts of the code of a file and released it
under the GPL; but in all cases I have contributed a significant portion
of the code in each file and it's that code that is getting the AGPL
license; the GPL license of other contributors allows combining with
AGPL code.)
This would be better if getInternalFiles were
more polymorphic, but I can't see a good
way to accomplish that without messing with Data.Typeable,
which seemed like overkill.
Reverted CommandAction back to the simpler version.
This commit was sponsored by Eric Drechsel on Patreon.
Switched code to use a for loop to avoid a filterM that would have
doubled the memory used.
This commit was supported by the NSF-funded DataLad project.
Switch to Data.Map.Strict everywhere that used it.
There are still lots of lazy maps in git-annex. I think switching these
is safe. The risk is that there might be a map that is used in a way
that relies on the values not being evaluated to WHNF, and switching to
strict might result in bad performance or memory use. So, I have not
switched everything.
Previously, it only flushed when the queue got larger than 1.
Also, make the queue auto-flush when items are added, rather than needing
to be flushed as a separate step. This simplifies the code and make it more
efficient too, as it avoids needing to read the queue out of the state to
check if it should be flushed.
The bug caused the size of the queue to be miscalculted; it was doubled
each time an item was added. Commands run after approx 140 items rather
than the intended 10240!
A git pathspec is a filename, except when it starts with ':', it's taken
to refer to a branch, etc. Rather than special case ':', any filename
starting with anything unusual is prefixed with "./"
This could have been a real mess to deal with, but luckily SafeCommand
is already extensively used and so we know at the type level the difference
between parameters that are files, and parameters that are command options.
Testing did show that Git.Queue was not using SafeCommand on
filenames fed to xargs. (Filenames starting with '-' worked before only
because -- was used to separate filenames from options when calling eg git
add.)
The test suite now passes with filenames starting with ':'. However, I did
not keep that change to it, because such filenames are probably not legal
on windows, and I have enough ugly windows ifdefs in there as it is.
This commit was sponsored by Otavio Salvador. Thanks!
Make Utility.Process wrap the parts of System.Process that I use,
and add debug logging to them.
Also wrote some higher-level code that allows running an action
with handles to a processes stdin or stdout (or both), and checking
its exit status, all in a single function call.
As a bonus, the debug logging now indicates whether the process
is being run to read from it, feed it data, chat with it (writing and
reading), or just call it for its side effect.
Test suite now passes with -threaded!
I traced back all the hangs with -threaded to System.Cmd.Utils. It seems
it's just crappy/unsafe/outdated, and should not be used. System.Process
seems to be the cool new thing, so converted all the code to use it
instead.
In the process, --debug stopped printing commands it runs. I may try to
bring that back later.
Note that even SafeSystem was switched to use System.Process. Since that
was a modified version of code from System.Cmd.Utils, it needed to be
converted too. I also got rid of nearly all calls to forkProcess,
and all calls to executeFile, which I'm also doubtful about working
well with -threaded.
While I was in there, I noticed and fixed a bug in the queue size
calculations. It was never encountered only because Queue.add was
only ever run with 1 file in the list.
This allows the queue to be used in a single process for multiple possibly
conflicting commands, like add and rm, without running them out of order.
This assumes that running the same git subcommand with different parameters
cannot itself conflict.
useful when adding hundreds of thousands of files on a system with plenty
of memory.
git add gets quite slow in such a large repository, so if the system has
more than the ~32 mb of memory the queue can use by default, it's a useful
optimisation to increase the queue size, in order to decrease the number
of times git add is run.
Under ghc 7.4, this seems to be able to handle all filename encodings
again. Including filename encodings that do not match the LANG setting.
I think this will not work with earlier versions of ghc, it uses some ghc
internals.
Turns out that ghc 7.4 has a special filesystem encoding that it uses when
reading/writing filenames (as FilePaths). This encoding is documented
to allow "arbitrary undecodable bytes to be round-tripped through it".
So, to get FilePaths from eg, git ls-files, set the Handle that is reading
from git to use this encoding. Then things basically just work.
However, I have not found a way to make Text read using this encoding.
Text really does assume unicode. So I had to switch back to using String
when reading/writing data to git. Which is a pity, because it's some
percent slower, but at least it works.
Note that stdout and stderr also have to be set to this encoding, or
printing out filenames that contain undecodable bytes causes a crash.
IMHO this is a misfeature in ghc, that the user can pass you a filename,
which you can readFile, etc, but that default, putStr of filename may
cause a crash!
Git.CheckAttr gave me special trouble, because the filenames I got back
from git, after feeding them in, had further encoding breakage.
Rather than try to deal with that, I just zip up the input filenames
with the attributes. Which must be returned in the same order queried
for this to work.
Also of note is an apparent GHC bug I worked around in Git.CheckAttr. It
used to forkProcess and feed git from the child process. Unfortunatly,
after this forkProcess, accessing the `files` variable from the parent
returns []. Not the value that was passed into the function. This screams
of a bad bug, that's clobbering a variable, but for now I just avoid
forkProcess there to work around it. That forkProcess was itself only added
because of a ghc bug, #624389. I've confirmed that the test case for that
bug doesn't reproduce it with ghc 7.4. So that's ok, except for the new ghc
bug I have not isolated and reported. Why does this simple bit of code
magnet the ghc bugs? :)
Also, the symlink touching code is currently broken, when used on utf-8
filenames in a non-utf-8 locale, or probably on any filename containing
undecodable bytes, and I temporarily commented it out.
Many functions took the repo as their first parameter. Changing it
consistently to be the last parameter allows doing some useful things with
currying, that reduce boilerplate.
In particular, g <- gitRepo is almost never needed now, instead
use inRepo to run an IO action in the repo, and fromRepo to get
a value from the repo.
This also provides more opportunities to use monadic and applicative
combinators.
This was more complex than would be expected. unannex has to use git commit -a
since it's removing files from git; git commit filelist won't do.
Allow commands to be added to the Git queue that have no associated files,
and run such commands once.
