Don't allow "exporttree=yes" to be set when the special remote
does not support exports. That would be confusing since the user would
set up a special remote for exports, but `git annex export` to it would
later fail.
This commit was supported by the NSF-funded DataLad project.
Straightforward enough, except for the needed belt-and-suspenders sanity
checks to avoid foot shooting due to exports not being key/value stores.
* Even when annex.verify=false, always verify from exports.
* Only get files from exports that use a backend that supports
checksum verification.
* Never trust exports, even if the user says to, because then
`git annex drop` would drop content if the export seemed to contain
a copy.
This commit was supported by the NSF-funded DataLad project.
Cryptographically secure hashes can be forced to be used in a repository,
by setting annex.securehashesonly. This does not prevent the git repository
from containing files with insecure hashes, but it does prevent the content
of such files from being pulled into .git/annex/objects from another
repository.
We want to make sure that at no point does git-annex accept content into
.git/annex/objects that is hashed with an insecure key. Here's how it
was done:
* .git/annex/objects/xx/yy/KEY/ is kept frozen, so nothing can be
written to it normally
* So every place that writes content must call, thawContent or modifyContent.
We can audit for these, and be sure we've considered all cases.
* The main functions are moveAnnex, and linkToAnnex; these were made to
check annex.securehashesonly, and are the main security boundary
for annex.securehashesonly.
* Most other calls to modifyContent deal with other files in the KEY
directory (inode cache etc). The other ones that mess with the content
are:
- Annex.Direct.toDirectGen, in which content already in the
annex directory is moved to the direct mode file, so not relevant.
- fix and lock, which don't add new content
- Command.ReKey.linkKey, which manually unlocks it to make a
copy.
* All other calls to thawContent appear safe.
Made moveAnnex return a Bool, so checked all callsites and made them
deal with a failure in appropriate ways.
linkToAnnex simply returns LinkAnnexFailed; all callsites already deal
with it failing in appropriate ways.
This commit was sponsored by Riku Voipio.
Where before the "name" of a key and a backend was a string, this makes
it a concrete data type.
This is groundwork for allowing some varieties of keys to be disabled
in file2key, so git-annex won't use them at all.
Benchmarks ran in my big repo:
old git-annex info:
real 0m3.338s
user 0m3.124s
sys 0m0.244s
new git-annex info:
real 0m3.216s
user 0m3.024s
sys 0m0.220s
new git-annex find:
real 0m7.138s
user 0m6.924s
sys 0m0.252s
old git-annex find:
real 0m7.433s
user 0m7.240s
sys 0m0.232s
Surprising result; I'd have expected it to be slower since it now parses
all the key varieties. But, the parser is very simple and perhaps
sharing KeyVarieties uses less memory or something like that.
This commit was supported by the NSF-funded DataLad project.
ghc 8 added backtraces on uncaught errors. This is great, but git-annex was
using error in many places for a error message targeted at the user, in
some known problem case. A backtrace only confuses such a message, so omit it.
Notably, commands like git annex drop that failed due to eg, numcopies,
used to use error, so had a backtrace.
This commit was sponsored by Ethan Aubin.
Note that get --from foo --failed will get things that a previous get --from bar
tried and failed to get, etc. I considered making --failed only retry
transfers from the same remote, but it was easier, and seems more useful,
to not have the same remote requirement.
Noisy due to some refactoring into Types/
When annex.thin is set, adding an object will add the execute bits to the
work tree file, and this does mean that the annex object file ends up
executable.
This doesn't add any complexity that wasn't already present, because git
annex add of an executable file has always ingested it so that the annex
object ends up executable.
But, since an annex object file can be executable or not, when populating
an unlocked file from one, the executable bit is always added or removed
to match the mode of the pointer file.
Fixes several bugs with updates of pointer files. When eg, running
git annex drop --from localremote
it was updating the pointer file in the local repository, not the remote.
Also, fixes drop ../foo when run in a subdir, and probably lots of other
problems. Test suite drops from ~30 to 11 failures now.
TopFilePath is used to force thinking about what the filepath is relative
to.
The data stored in the sqlite db is still just a plain string, and
TopFilePath is a newtype, so there's no overhead involved in using it in
DataBase.Keys.
Since the file was present and locked, its annex object was not in the
inode cache. So, despite not needing to update the annex object when the
clean filter is run on the content by git merge, it does need to record the
inode cache of the annex object. Otherwise, the annex object will be
assumed to be bad, since its inode is not cached.
Decided it's too scary to make v6 unlocked files have 1 copy by default,
but that should be available to those who need it. This is consistent with
git-annex not dropping unused content without --force, etc.
* Added annex.thin setting, which makes unlocked files in v6 repositories
be hard linked to their content, instead of a copy. This saves disk
space but means any modification of an unlocked file will lose the local
(and possibly only) copy of the old version.
* Enable annex.thin by default on upgrade from direct mode to v6, since
direct mode made the same tradeoff.
* fix: Adjusts unlocked files as configured by annex.thin.
This can happen when ingesting a new file in either locked or unlocked
mode, when some unlocked files in the repo use the same key, and the
content was not locally available before.
This fixes a race where the modified file ended up in annex/objects, and
the InodeCache stored in the database was for the modified version, so
git-annex didn't know it had gotten modified.
The race could occur when the smudge filter was running; now it gets the
InodeCache before generating the Key, which avoids the race.
This covers the case where multiple files have the same content and are
added with git add. Previously only the one that was linked to the annex
got its inode cached; now both are.
When a v6 unlocked files is removed from the work tree,
unused doesn't show it. When it gets removed from the index,
unused does show it. This is the same as a locked file.
If multiple files point to the same annex object, the user may want to
modify them independently, so don't use a hard link.
Also, check diskreserve when copying.
This avoids querying the database when the content file doen't exist
(or otherwise fails the provided check). However, it does add overhead of
querying the database, and will certianly impact performance.
The Keys database can hold multiple inode caches for a given key. One for
the annex object, and one for each pointer file, which may not be hard
linked to it.
Inode caches for a key are recorded when its content is added to the annex,
but only if it has known pointer files. This is to avoid the overhead of
maintaining the database when not needed.
When the smudge filter outputs a file's content, the inode cache is not
updated, because git's smudge interface doesn't let us write the file. So,
dropping will fall back to doing an expensive verification then. Ideally,
git's interface would be improved, and then the inode cache could be
updated then too.
Renamed the db to keys, since it is various info about a Keys.
Dropping a key will update its pointer files, as long as their content can
be verified to be unmodified. This falls back to checksum verification, but
I want it to use an InodeCache of the key, for speed. But, I have not made
anything populate that cache yet.
When core.sharedRepository is set, annex object files are not made mode
444, since that prevents a user other than the file owner from locking
them. Instead, a mode such as 664 is used in this case.
