Commit graph

2230 commits

Author SHA1 Message Date
Joey Hess
9dfe03dbcd Improve shutdown due to --time-limit, especially for fsck
* Perform a clean shutdown when --time-limit is reached.
  This includes running queued git commands, and cleanup actions normally
  run when a command is finished.
* fsck: Commit incremental fsck database when --time-limit is reached.
  Previously, some of the last files fscked did not make it into the
  database when using --time-limit.

Note that this changes Annex.addCleanup hooks, to run after --time-limit
expires. Fsck was using such a hook to clean up after a
--incremental-schedule, and that shouldn't run when --time-limit exipires
it. So, instead, moved that cleanup code to be run by cleanupIncremental.
Resulted in some data type juggling.
2015-07-31 16:01:54 -04:00
Joey Hess
e954b165a1 prep release 2015-07-31 11:34:53 -04:00
Joey Hess
14d15dcf0e response 2015-07-31 11:34:09 -04:00
Joey Hess
b30324fec7 init: Detect when the filesystem is crippled such that it ignores attempts to remove the write bit from a file, and enable direct mode. Seen with eg, NTFS fuse on linux. 2015-07-30 14:06:17 -04:00
Joey Hess
b7a5d9c3e1 The last release accidentially removed a number of options from the copy command. (-J, file matching options, etc). These have been added back. 2015-07-30 13:33:35 -04:00
Joey Hess
506452012c Fix rsync special remote to work when -Jn is used for concurrent uploads. 2015-07-30 13:29:45 -04:00
Joey Hess
29f3049def webapp: Support enabling known gitlab.com remotes. 2015-07-27 16:03:22 -04:00
Joey Hess
b62f8fa6ad prep release 2015-07-27 12:25:03 -04:00
Joey Hess
98aa61e766 Merge branch 'gitlab' 2015-07-27 12:22:35 -04:00
Joey Hess
ee25170de5 changelog for gitlab 2015-07-27 12:17:35 -04:00
Joey Hess
1fb9ab342b Support building without persistent database on for systems that lack TH. This removes support for incremental fsck. 2015-07-25 17:37:09 -04:00
Joey Hess
49d102f98b addurl now accepts --prefix and --suffix options to adjust the filenames used 2015-07-21 12:50:05 -04:00
Joey Hess
676115220c wording 2015-07-20 20:41:55 -04:00
Joey Hess
4043837050 reword 2015-07-20 20:30:27 -04:00
Joey Hess
bc9c33e846 looks like richih will maintain it in debian 2015-07-20 20:23:56 -04:00
Joey Hess
e99affb71b Adjust debian build deps: The webapp can now build on arm64, s390x and hurd-i386. WebDAV support is also available on those architectures. 2015-07-20 20:20:34 -04:00
Joey Hess
4cc8433d5d correct old changelog entry
It looked at permalinks, not guids
2015-07-20 14:59:20 -04:00
Joey Hess
f95a8c8672 importfeed: Look at not only permalinks, but now also guids to identify previously downloaded files.
I've seen rss feeds that have no permalinks, only guids (which are
sometimes in the form of permalinks, argh/sigh).

I had previously avoided trusting guids to be globally unique, because my
survey of rss feeds that I subscribe to shows a lot of pretty bad
"guids" like "2 at http://serialpodcast.org" or even worse "oth20150401-hq".
Worry was that two podcasts that are generating guids so badly, that
there's no guarantee they're actually globally unique.

But, I'm seeing too many url changes that result in redundant files, so
let's try this. If feeds are so broken that guids overlap, they could just
as well incorrectly call them permalinks too.
2015-07-20 14:56:57 -04:00
Joey Hess
3c134ee21a sync --content: Fix bug that caused files to be uploaded to eg, more archive remotes than wanted copies, only to later be dropped to satisfy the preferred content settings. 2015-07-20 14:24:13 -04:00
Joey Hess
113ad85a15 reword 2015-07-20 13:32:34 -04:00
Joey Hess
36cf98a24f update 2015-07-20 10:50:59 -04:00
Joey Hess
afe6a53bca Fix bug that prevented uploads to remotes using new-style chunking from resuming after the last successfully uploaded chunk.
"checkPresent baser" was wrong; the baser has a dummy checkPresent action
not the real one. So, to fix this, we need to call preparecheckpresent to
get a checkpresent action that can be used to check if chunks are present.

Note that, for remotes like S3, this means that the preparer is run,
which opens a S3 handle, that will be used for each checkpresent of a
chunk. That's a good thing; if we're resuming an upload that's already many
chunks in, it'll reuse that same http connection for each chunk it checks.
Still, it's not a perfectly ideal thing, since this is a different http
connection that the one that will be used to upload chunks. It would be
nice to improve the API so that both use the same http connection.
2015-07-16 15:01:27 -04:00
Joey Hess
5de3b4d07a update for completion changes 2015-07-16 14:57:23 -04:00
Joey Hess
02d522a12e Debian package (and any other packages built using make install) now includes bash completion. 2015-07-13 12:26:06 -04:00
Joey Hess
b95a48fe45 converted Assistant and Watch; avoid duplicate arg parsing for no repo mode 2015-07-13 11:42:42 -04:00
Joey Hess
3d8a8e9792 convert Dead, and allow multiple --key options 2015-07-13 10:26:54 -04:00
Joey Hess
adec382bc2 converted MetaData, eliminating a global value from Annex state .. beautiful 2015-07-12 09:25:43 -04:00
Joey Hess
dd54d9b617 Merge branch 'master' into optparse-applicative
Conflicts:
	debian/changelog
2015-07-10 17:07:54 -04:00
Joey Hess
3074633955 typo 2015-07-10 16:52:58 -04:00
Joey Hess
bda6a020e6 prep release 2015-07-10 16:39:05 -04:00
Joey Hess
b4d22e6d49 doc updates 2015-07-10 13:49:37 -04:00
Joey Hess
aea694ed3f Removed support for optparse-applicative versions older than 0.10.
Debian stable has 0.10.0.
2015-07-07 23:54:46 -04:00
Joey Hess
b11d2f5a8a unused: --used-refspec can now be configured to look at refs in the reflog. This provides a way to not consider old versions of files to be unused after they have reached a specified age, when the old refs in the reflog expire.
May be slow.
2015-07-07 17:13:50 -04:00
Joey Hess
a51b98cdd5 sync: When annex.autocommit=false, avoid making any commit of local changes, while still merging with remote to the extent possible. 2015-07-07 16:36:11 -04:00
Joey Hess
81ad277a85 add: Stage symlinks the same as git add would, even if they are not a link to annexed content. 2015-07-07 16:15:30 -04:00
Joey Hess
60fc25e9d3 merge: Avoid creating the synced/master branch.
The branch needs to be created when merging from the remote in sync,
since we diff between it and the remote's sync branch. But git annex merge
should not be creating sync branches.
2015-07-07 15:53:27 -04:00
Joey Hess
625303226d import: Fix failure of cross-device import on Windows.
As well as import, 2 other places ran "mv" manually, so changed them to use
moveFile as well.
2015-07-07 14:48:23 -04:00
Joey Hess
f8bc2d159e clarify 2015-07-07 13:20:57 -04:00
Joey Hess
751f9c40ce On linux, pass --as-needed to linker to avoid linking with unused shared libraries including libyaml. 2015-07-07 13:19:13 -04:00
Joey Hess
dbd41159e0 Support git's undocumented core.sharedRepository=2 value, which is equivilant to "world". 2015-07-06 15:33:44 -04:00
Joey Hess
174da80ddc bugfix: Pass --full-tree when using git ls-files to get a list of files on the git-annex branch, so it works when run in a subdirectory. This bug affected git-annex unused, and potentially also transitions running code and other things. 2015-07-06 14:09:54 -04:00
Joey Hess
1529add61a Brought back the setkey plumbing command that was removed in 2011, since we found a use case for it. Note that the command's syntax was changed for consistency. 2015-07-02 17:44:25 -04:00
Joey Hess
4af3dc72c1 assistant: Fix ANNEX_SHELL_DIR written to ~/.ssh/authorized_keys in local pairing to be the absolute path to the repository, not "."
This was a reversion caused by the relative path changes in 5.20150113.

Other uses of addAuthorizedKeys seem to be ok. If the user enters a
directory like ~/annex, it writes GIT_ANNEX_SHELL_DIRECTORY=annex, and
git-annex-shell assumes that's relative to HOME.
2015-07-02 15:10:50 -04:00
Joey Hess
20edbf850c assistant: Fix local pairing to not include newline in ssh pubkey, which is rejected on the other end for security reasons. 2015-07-02 14:50:20 -04:00
Joey Hess
1f35141aff assistant --autostart: First any daemons that are already running, which might be left over from a previous login session and so unable to use the ssh agent of a new login session. 2015-07-02 14:16:53 -04:00
Joey Hess
833cf5fff9 log: Fix reversion introduced in version 5.20150528 that broke this command. 2015-07-02 12:53:38 -04:00
Joey Hess
e417c17fc6 releasing package git-annex version 5.20150617 2015-06-17 14:17:20 -04:00
Joey Hess
f20a8f88de prep release 2015-06-16 20:29:09 -04:00
Joey Hess
c217dbf2a5 reorder 2015-06-16 20:28:32 -04:00
Joey Hess
8b74aec3ea Increased the default annex.bloomaccuracy from 1000 to 10000000
This makes git annex unused use around 48 mb more memory than it did before,
but the massive increase in accuracy makes this worthwhile for all but the
smallest systems.

Also, I want to use the bloom filter for sync --all --content, to avoid
dropping files that the preferred content doesn't want, and 1/1000
false positives would be far too many in that use case, even if it were
acceptable for unused.

Actual memory use numbers:

1000: 21.06user 3.42system 0:26.40elapsed 92%CPU (0avgtext+0avgdata 501552maxresident)k
1000000: 21.41user 3.55system 0:26.84elapsed 93%CPU (0avgtext+0avgdata 549496maxresident)k
10000000: 21.84user 3.52system 0:27.89elapsed 90%CPU (0avgtext+0avgdata 549920maxresident)k

Based on these numbers, 10 million seemed a better pick than 1 million.
2015-06-16 18:12:00 -04:00
Joey Hess
f7350b7c33 wording 2015-06-16 17:32:41 -04:00
Joey Hess
8268f7951e adjust standard preferred content to work better with git annex sync --all --content
backup: Use new "anything" terminal. This means that content that
is not unused, but has no associated file will be wanted by backup repos.

unwanted: "not anything" will result in any and all content moving
off of these repos.

incremental backup: Remove the "(include=* or unused)",
so it matches content that has no associated files
but is not unused.

client: Add a include=* to the expression. This limits it to matching
only files in the work tree. Without this change, sync --all --content
would match a key against the expression, and since it matches
exclude=archive/*, the client repo would have wanted the file content.
The "and not unused" would have kept unused objects out, but not
objects that were not known to be unused, or objects that another branch
referred to. In practice, everything would have flooded into client repos
without this change.
2015-06-16 17:18:53 -04:00
Joey Hess
a4955542a3 Fix incremental backup standard preferred content expression to match its documentation, which says it does not want files that have reached a backup repository.
Checked history and these have been out of sync from the very beginning!
2015-06-16 17:10:10 -04:00
Joey Hess
8c46ea22c2 Added new "anything" preferred content expression, which matches all versions of all files. 2015-06-16 17:03:34 -04:00
Joey Hess
29c03145e6 sync: Add support for --all and --unused. 2015-06-16 16:50:03 -04:00
Joey Hess
67f7f1b1cb info: Added json output for "backend usage", "numcopies stats", "repositories containing these files", and "transfers in progress". 2015-06-16 13:50:28 -04:00
Joey Hess
c96b333869 clarify 2015-06-15 15:30:00 -04:00
Joey Hess
9b38c14165 debian/cabal-wrapper: Removed this hack which should not be needed anymore. 2015-06-14 14:43:55 -04:00
Joey Hess
829007d629 Improve url parsing to handle some urls containing illegal [] characters in their paths.
Ie, "https://archive.org/download/zoom-2/Zoom - Release 2 (1996)(Active Software)[!].iso"
2015-06-14 13:39:44 -04:00
Joey Hess
0a998032ed Fix bug that prevented enumerating locally present objects in repos tuned with annex.tune.objecthash1=true
Need to walk 1 level of subdirs less in this case.

The git-annex branch traversal code didn't have a similar bug.
2015-06-11 15:15:05 -04:00
Joey Hess
608172fef5 add git-annex-shell link to standalone deb patch 2015-06-10 13:58:30 -04:00
Joey Hess
e0c2bcdc74 Build documentation with deterministic=1 for reproducible builds. (A new ikiwiki feature.) Closes: #785736 2015-06-09 17:53:55 -04:00
Joey Hess
800e9f2658 tahoe: Use ~/.tahoe-git-annex/ rather than ~/.tahoe/git-annex/ to avoid old versions of tahoe create-client choking. 2015-06-09 15:29:16 -04:00
Joey Hess
e4f22fa721 close debian bug too 2015-06-09 15:15:12 -04:00
Joey Hess
f9bda65245 clarify 2015-06-09 15:08:13 -04:00
Joey Hess
f8ab3bc449 dead --key: Can be used to mark a key as dead. 2015-06-09 14:52:05 -04:00
Joey Hess
6eefc5db65 fsck: Ignore keys that are known to be dead when running in --all mode or a in a bare repo. Otherwise, still reports files with lost contents, even if the content is dead. 2015-06-09 14:08:57 -04:00
Joey Hess
2989cdfe3e re-remove hamlet dep 2015-06-06 14:13:46 -04:00
Joey Hess
5f0f063a7a S3: Publically accessible buckets can be used without creds. 2015-06-05 16:23:35 -04:00
Joey Hess
4acd28bf21 public=yes config to send AclPublicRead
In my tests, this has to be set when uploading a file to the bucket
and then the file can be accessed using the bucketname.s3.amazonaws.com
url.

Setting it when creating the bucket didn't seem to make the whole bucket
public, or allow accessing files stored in it. But I have gone ahead and
also sent it when creating the bucket just in case that is needed in some
case.
2015-06-05 14:38:01 -04:00
Joey Hess
de3bd11a2c import --clean-duplicates: Fix bug that didn't count local or trusted repo's copy of a file as one of the necessary copies to allow removing it from the import location. 2015-06-03 13:15:38 -04:00
Joey Hess
d28e8fbfd5 get --incomplete: New option to resume any interrupted downloads. 2015-06-02 14:20:38 -04:00
Joey Hess
00b094442e assistant: Consume systemd-networkd dbus events to learn about changes to network connections, as was already done with network-manager and wicd. Thanks to Sebastian Reuße for the patches. 2015-06-02 12:54:20 -04:00
Joey Hess
a6d54e49a0 sync, remotedaemon: Pass configured ssh-options even when annex.sshcaching is disabled. 2015-05-30 22:01:52 -04:00
Joey Hess
36b9c9ca5f fromkey, registerurl: Improve handling of urls that happen to also be parsable as strange keys. 2015-05-30 02:08:49 -04:00
Joey Hess
0fd4bef75e prep release 2015-05-28 10:49:04 -04:00
Joey Hess
8990d4cc68 fsck: When checksumming a file fails due to a hardware fault, the file is now moved to the bad directory, and the fsck proceeds. Before, the fsck immediately failed. 2015-05-27 16:40:03 -04:00
Joey Hess
67469ce01f Revert removal dependency on obsolete hamlet package, since the autobuilders are not ready for this change yet and it prevented them from building the webapp. Reopens: #786659 2015-05-27 14:49:58 -04:00
Joey Hess
e810564338 Revert "remove deprecated hamlet package"
This reverts commit cf650eaa99.

It's too early to do this; the linux and android autobuilder will need to
be updated to use the new version of shakespeare, and that will require a
complete refresh of them. In the meantime, this has knocked the webapp out
of the autobuilders.
2015-05-27 14:47:41 -04:00
Joey Hess
5e1f1bd252 Linux standalone, OSX app: Improve runshell script to always quote shell vars, so that it will work when eg, untarred into a directory path with spaces in its name. 2015-05-26 15:38:54 -04:00
Joey Hess
6e05764532 changelog for bug closed in last release 2015-05-24 15:45:36 -04:00
Joey Hess
77c43a388e fromkey, registerurl: Allow urls to be specified instead of keys, and generate URL keys.
This is especially useful because the caller doesn't need to generate valid
url keys, which involves some escaping of characters, and may involve
taking a md5sum of the url if it's too long.
2015-05-22 22:41:36 -04:00
Joey Hess
cab2f05b50 lintian fix 2015-05-22 16:06:16 -04:00
Joey Hess
cf650eaa99 remove deprecated hamlet package
shakespeare provides this now
2015-05-22 15:46:47 -04:00
Joey Hess
979064b1cb prep release 2015-05-22 14:20:21 -04:00
Joey Hess
1b01322de0 OSX: Corrected the location of trustedkeys.gpg, so the built-in upgrade code will find it. Fixes OSX upgrade going forward, but older versions won't upgrade themselves due to this problem. 2015-05-22 13:41:47 -04:00
Joey Hess
8e40cb6f56 Build documentation with TZ=UTC for reproducible builds. See #785736. 2015-05-19 15:45:21 -04:00
Joey Hess
ecb0d5c087 use lock pools throughout git-annex
The one exception is in Utility.Daemon. As long as a process only
daemonizes once, which seems reasonable, and as long as it avoids calling
checkDaemon once it's already running as a daemon, the fcntl locking
gotchas won't be a problem there.

Annex.LockFile has it's own separate lock pool layer, which has been
renamed to LockCache. This is a persistent cache of locks that persist
until closed.

This is not quite done; lockContent stil needs to be converted.
2015-05-19 14:09:52 -04:00
Joey Hess
6ec7c4fef4 webapp: Fix zombie xdg-open process left when opening file browser. Closes: #785498 2015-05-17 17:26:19 -04:00
Joey Hess
b284cefccc fix type in the name of --used-refspec in changelog 2015-05-14 15:46:01 -04:00
Joey Hess
823bb8031b add annex.used-refspec 2015-05-14 15:44:08 -04:00
Joey Hess
86699ff861 unused: Add --used option, which can specify a set of refs to consider used, rather than the default of considering all refs used. 2015-05-14 15:31:38 -04:00
Joey Hess
7ebf234616 Stale transfer lock and info files will be cleaned up automatically when get/unused/info commands are run.
Deleting lock files is tricky, tricky stuff. I think I got it right!
2015-05-12 20:11:23 -04:00
Joey Hess
8c2dd7d8ee Fix an unlikely race that could result in two transfers of the same key running at once.
As discussed in bug report.
2015-05-12 19:39:28 -04:00
Joey Hess
61ccf95004 Avoid accumulating transfer failure log files unless the assistant is being used.
Only the assistant uses these, and only the assistant cleans them up, so
make only git annex transferkeys write them,

There is one behavior change from this. If glacier is being used, and a
manual git annex get --from glacier fails because the file isn't available
yet, the assistant will no longer later see that failed transfer file and
retry the get. Hope no-one depended on that old behavior.
2015-05-12 15:53:38 -04:00
Joey Hess
a812d598ef Take space that will be used by running downloads into account when checking annex.diskreserve. 2015-05-12 15:20:22 -04:00
Joey Hess
505d540360 allow building without ascii-progress, since it is not ready yet
No progress bars with -J unless built with ascii-progress.
2015-05-12 13:54:16 -04:00
Joey Hess
e27b97d364 Merge branch 'master' into concurrentprogress
Conflicts:
	Command/Fsck.hs
	Messages.hs
	Remote/Directory.hs
	Remote/Git.hs
	Remote/Helper/Special.hs
	Types/Remote.hs
	debian/changelog
	git-annex.cabal
2015-05-12 13:23:22 -04:00
Joey Hess
96d24a8161 note about git annex drop behavior change in bare repo 2015-05-12 13:02:22 -04:00
Joey Hess
4b2e3210ea drop: Now supports --all, --unused, and --key. 2015-05-12 13:00:06 -04:00