fsck: Ignore keys that are known to be dead when running in --all mode or a in a bare repo. Otherwise, still reports files with lost contents, even if the content is dead.

Command/Fsck.hs

@@ -99,7 +99,7 @@ perform key file backend numcopies = check
 	, verifyDirectMode key file
 	, checkKeySize key
 	, checkBackend backend key (Just file)
-	, checkKeyNumCopies key file numcopies
+	, checkKeyNumCopies key (Just file) numcopies
 	]
 
 {- To fsck a remote, the content is retrieved to a tmp file,
@@ -125,7 +125,7 @@ performRemote key file backend numcopies remote =
 		[ verifyLocationLogRemote key file remote present
 		, checkKeySizeRemote key remote localcopy
 		, checkBackendRemote backend key remote localcopy
-		, checkKeyNumCopies key file numcopies
+		, checkKeyNumCopies key (Just file) numcopies
 		]
 	withtmp a = do
 		pid <- liftIO getPID
@@ -160,7 +160,7 @@ performKey key backend numcopies = check
 	[ verifyLocationLog key (key2file key)
 	, checkKeySize key
 	, checkBackend backend key Nothing
-	, checkKeyNumCopies key (key2file key) numcopies
+	, checkKeyNumCopies key Nothing numcopies
 	]
 
 check :: [Annex Bool] -> Annex Bool
@@ -343,15 +343,21 @@ checkBackendOr' bad backend key file postcheck =
 				, return True
 				)
 
-checkKeyNumCopies :: Key -> String -> NumCopies -> Annex Bool
-checkKeyNumCopies key file numcopies = do
+checkKeyNumCopies :: Key -> AssociatedFile -> NumCopies -> Annex Bool
+checkKeyNumCopies key afile numcopies = do
+	let file = fromMaybe (key2file key) afile
 	(untrustedlocations, safelocations) <- trustPartition UnTrusted =<< Remote.keyLocations key
 	let present = NumCopies (length safelocations)
 	if present < numcopies
-		then do
-			ppuuids <- Remote.prettyPrintUUIDs "untrusted" untrustedlocations
-			warning $ missingNote file present numcopies ppuuids
-			return False
+		then ifM (pure (isNothing afile) <&&> checkDead key)
+			( do
+				showLongNote $ "This key is dead, skipping."
+				return True
+			, do
+				ppuuids <- Remote.prettyPrintUUIDs "untrusted" untrustedlocations
+				warning $ missingNote file present numcopies ppuuids
+				return False
+			)
 		else return True
 
 missingNote :: String -> NumCopies -> NumCopies -> String -> String

Logs/Location.hs

@@ -8,7 +8,7 @@
  - Repositories record their UUID and the date when they --get or --drop
  - a value.
  - 
- - Copyright 2010-2014 Joey Hess <id@joeyh.name>
+ - Copyright 2010-2015 Joey Hess <id@joeyh.name>
  -
  - Licensed under the GNU GPL version 3 or higher.
  -}
@@ -19,7 +19,8 @@ module Logs.Location (
 	logChange,
 	loggedLocations,
 	loggedLocationsHistorical,
-	locationLog,
+	checkDead,
+	setDead,
 	loggedKeys,
 	loggedKeysFor,
 ) where
@@ -62,10 +63,18 @@ getLoggedLocations getter key = do
 	config <- Annex.getGitConfig
 	map toUUID <$> getter (locationLogFile config key)
 
-locationLog :: Key -> Annex [LogLine]
-locationLog key = do
+{- For a key to be dead, all locations that have location status for the key
+ - must have InfoDead set. -}
+checkDead :: Key -> Annex Bool
+checkDead key = do
 	config <- Annex.getGitConfig
-	currentLog (locationLogFile config key)
+	ls <- compactLog <$> readLog (locationLogFile config key)
+	return $ all (\l -> status l == InfoDead) ls
+
+{- Updates the log to say that a key is dead. This changes all logged lines
+ - for the key, in any location, to be InfoDead. -}
+setDead :: Key -> Annex ()
+setDead key = undefined
 
 {- Finds all keys that have location log information.
  - (There may be duplicate keys in the list.) -}

debian/changelog

@@ -16,6 +16,9 @@ git-annex (5.20150529) UNRELEASED; urgency=medium
     the public to access the bucket's content.
   * S3: Publically accessible buckets can be used without creds.
   * Re-remove dependency on obsolete hamlet package. Closes: #786659
+  * fsck: Ignore keys that are known to be dead when running in --all mode
+    or a in a bare repo. Otherwise, still reports files with lost contents,
+    even if the content is dead.
 
  -- Joey Hess <id@joeyh.name>  Sat, 30 May 2015 02:07:18 -0400