Clean up from 9769235d6b.
In some cases, looking up a remote by name even though it has no UUID is
desirable. This includes git annex sync, which can operate on remotes
without an annex, and XMPP pairing, which runs addRemote (with calls
byName) before the UUID of the XMPP remote has been configured in git.
Pass subcommand as a regular param, which allows passing git parameters
like -c before it. This was already done in the pipeing set of functions,
but not the command running set.
I have seen some other programs do this, and think it's pretty cool. Means
you can test wherever it's deployed, as well as at build time.
My other reason for doing it is less happy. Cabal's handling of test suites
sucks, requiring duplicated info, and even when that's done, it fails to
preprocess hsc files here. Building it in avoids that and avoids having
to explicitly tell cabal to enable test suites, which would then make it
link the test executable every time, which is unnecessarily slow.
This also has the benefit that now "make fast test" does a max speed build
and tests it.
The only thing lost is ./ghci
Speed: make fast used to take 20 seconds here, when rebuilding from
touching Command/Unused.hs. With cabal, it's 29 seconds.
Adding a file that is already annexed, but has been modified, was broken in
direct mode.
This fix makes the new content be added. It does have the problem that
re-running `git annex add` will checksum and re-add the content repeatedly,
until it's committed. This happens because the key associated with the file
does not change until the new one gets committed, so it keeps thinking the
file has changed.
Refactored annex link code into nice clean new library.
Audited and dealt with calls to createSymbolicLink.
Remaining calls are all safe, because:
Annex/Link.hs: ( liftIO $ createSymbolicLink linktarget file
only when core.symlinks=true
Assistant/WebApp/Configurators/Local.hs: createSymbolicLink link link
test if symlinks can be made
Command/Fix.hs: liftIO $ createSymbolicLink link file
command only works in indirect mode
Command/FromKey.hs: liftIO $ createSymbolicLink link file
command only works in indirect mode
Command/Indirect.hs: liftIO $ createSymbolicLink l f
refuses to run if core.symlinks=false
Init.hs: createSymbolicLink f f2
test if symlinks can be made
Remote/Directory.hs: go [file] = catchBoolIO $ createSymbolicLink file f >> return True
fast key linking; catches failure to make symlink and falls back to copy
Remote/Git.hs: liftIO $ catchBoolIO $ createSymbolicLink loc file >> return True
ditto
Upgrade/V1.hs: liftIO $ createSymbolicLink link f
v1 repos could not be on a filesystem w/o symlinks
Audited and dealt with calls to readSymbolicLink.
Remaining calls are all safe, because:
Annex/Link.hs: ( liftIO $ catchMaybeIO $ readSymbolicLink file
only when core.symlinks=true
Assistant/Threads/Watcher.hs: ifM ((==) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file))
code that fixes real symlinks when inotify sees them
It's ok to not fix psdueo-symlinks.
Assistant/Threads/Watcher.hs: mlink <- liftIO (catchMaybeIO $ readSymbolicLink file)
ditto
Command/Fix.hs: stopUnless ((/=) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) $ do
command only works in indirect mode
Upgrade/V1.hs: getsymlink = takeFileName <$> readSymbolicLink file
v1 repos could not be on a filesystem w/o symlinks
Audited and dealt with calls to isSymbolicLink.
(Typically used with getSymbolicLinkStatus, but that is just used because
getFileStatus is not as robust; it also works on pseudolinks.)
Remaining calls are all safe, because:
Assistant/Threads/SanityChecker.hs: | isSymbolicLink s -> addsymlink file ms
only handles staging of symlinks that were somehow not staged
(might need to be updated to support pseudolinks, but this is
only a belt-and-suspenders check anyway, and I've never seen the code run)
Command/Add.hs: if isSymbolicLink s || not (isRegularFile s)
avoids adding symlinks to the annex, so not relevant
Command/Indirect.hs: | isSymbolicLink s -> void $ flip whenAnnexed f $
only allowed on systems that support symlinks
Command/Indirect.hs: whenM (liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f) $ do
ditto
Seek.hs:notSymlink f = liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f
used to find unlocked files, only relevant in indirect mode
Utility/FSEvents.hs: | Files.isSymbolicLink s = runhook addSymlinkHook $ Just s
Utility/FSEvents.hs: | Files.isSymbolicLink s ->
Utility/INotify.hs: | Files.isSymbolicLink s ->
Utility/INotify.hs: checkfiletype Files.isSymbolicLink addSymlinkHook f
Utility/Kqueue.hs: | Files.isSymbolicLink s = callhook addSymlinkHook (Just s) change
all above are lower-level, not relevant
Audited and dealt with calls to isSymLink.
Remaining calls are all safe, because:
Annex/Direct.hs: | isSymLink (getmode item) =
This is looking at git diff-tree objects, not files on disk
Command/Unused.hs: | isSymLink (LsTree.mode l) = do
This is looking at git ls-tree, not file on disk
Utility/FileMode.hs:isSymLink :: FileMode -> Bool
Utility/FileMode.hs:isSymLink = checkMode symbolicLinkMode
low-level
Done!!
Now getKeysPresent checks that the key's content, not only its directory,
exists. In direct mode, the inode cache file is used as a standin for the
content.
removeAnnex always removes the inode cache file, and drop and move --from
always call removeAnnex, even if the object does not seem to be inAnnex,
to ensure it's always deleted.
This reverts commit 57780cb3a4.
This was buggy, it caused the direct mode cache to be lost when dropping
keys, so when the file is gotten back, it's stored in indirect mode.
Note to self: Do not attempt bug fixes at 6 am!
In indirect mode, now checks the inode cache to detect changes to a file.
Note that a file can still be changed if a process has it open for write,
after landing in the annex.
In direct mode, some checking of the inode cache was done before, but
from a much later point, so fewer modifications could be detected. Now it's
as good as indirect mode.
On crippled filesystems, no lock down is done before starting to add a
file, so checking the inode cache is the only protection we have.
git annex init probes for crippled filesystems, and sets direct mode, as
well as `annex.crippledfilesystem`.
Avoid manipulating permissions of files on crippled filesystems.
That would likely cause an exception to be thrown.
Very basic support in Command.Add for cripped filesystems; avoids the lock
down entirely since doing it needs both permissions and hard links.
Will make this better soon.
Various things that don't work on Android are just ifdefed out.
* the webapp (needs template haskell for arm)
* --include and --exclude globbing (needs libpcre, which is not ported;
probably I'll make it use the pure haskell glob library instead)
* annex.diskreserve checking (missing sys/statvfs.h)
* timestamp preservation support (yawn)
* S3
* WebDAV
* XMPP
The resulting 17mb binary has been tested on Android, and it is able to,
at least, print its usage message.
These files were left behind, and made getKeysPresent find keys that were
not present. It would be expensive to make getKeysPresent check that the
actual key files are present (it just lists the directories). But that's not
needed if we just clean up the stale cache and mapping files.
To handle systems that were in direct mode and got switched back with stale
direct mode files, made cleanObjectLoc remove all files in the key's directory.
git annex unused will still list keys that are gone but for which the stale
direct mode files exists. To deal with that, made dropunused remove the key's
directory even if the key does not seem to be present.
Making the pre-commit hook look at git diff-index to find changed direct
mode files and update the mappings works pretty well.
One case where it does not work is when a file is git annex added, and then
git rmed, and then this is committed. That's a no-op commit, so the hook
probably doesn't even run, and it certianly never notices that the file
was deleted, so the mapping will still have the original filename in it.
For this and other reasons, it's important that the mappings still be
treated as possibly inconsistent.
Also, the assistant now allows the pre-commit hook to run when in direct
mode, so the mappings also get updated there.
It used to not log to daemon.log when a repository was first created, and
when starting the webapp. Now both do. Redirecting stdout and stderr to the
log is tricky when starting the webapp, because the web browser may want to
communicate with the user. (Either a console web browser, or web.browser = echo)
This is handled by restoring the original fds when running the browser.
An earlier commit (mislabeled) made direct mode fsck check file checksums.
While it's expected for files to change at any time in direct mode, and so
fsck cannot complain every time there's a checksum mismatch, it is possible
for it to detect when a file does not *seem* to have changed, then check
its checksum, and so detect disk corruption or other problems.
This commit improves that, by checking a second time, if the checksum
fails, that the file is still not modified, before taking action. This way,
a direct mode file can be modified while being fscked.
Now there's a Config type, that's extracted from the git config at startup.
Note that laziness means that individual config values are only looked up
and parsed on demand, and so we get implicit memoization for all of them.
So this is not only prettier and more type safe, it optimises several
places that didn't have explicit memoization before. As well as getting rid
of the ugly explicit memoization code.
Not yet done for annex.<remote>.* configuration settings.
