add works in direct mode

Also, changed sync to no longer automatically add files in direct mode.
That was only necessary before because add didn't work.

Annex/Direct.hs

@@ -55,16 +55,7 @@ stageDirect = do
 			(Just key, Nothing, _) -> deletedannexed file key
 			(Nothing, Nothing, _) -> deletegit file
 			(_, Just _, _) -> addgit file
-	go (file, Nothing) = do
-		mstat <- liftIO $ catchMaybeIO $ getSymbolicLinkStatus file
-		case (mstat, toCache =<< mstat) of
-			(Nothing, _) -> noop
-			(Just stat, Just cache)
-				| isSymbolicLink stat -> addgit file
-				| otherwise -> void $ addDirect file cache
-			(Just stat, Nothing)
-				| isSymbolicLink stat -> addgit file
-				| otherwise -> noop
+	go _ = noop
 
 	modifiedannexed file oldkey cache = do
 		void $ removeAssociatedFile oldkey file

Command/Add.hs

@@ -21,14 +21,19 @@ import Annex.Perms
 import Utility.Touch
 import Utility.FileMode
 import Config
+import qualified Git.HashObject
+import qualified Git.UpdateIndex
+import Git.Types
 
 def :: [Command]
-def = [notDirect $ notBareRepo $
-	command "add" paramPaths seek "add files to annex"]
+def = [notBareRepo $ command "add" paramPaths seek "add files to annex"]
 
 {- Add acts on both files not checked into git yet, and unlocked files. -}
 seek :: [CommandSeek]
-seek = [withFilesNotInGit start, withFilesUnlocked start]
+seek =
+	[ withFilesNotInGit start
+	, whenNotDirect $ withFilesUnlocked start
+	]
 
 {- The add subcommand annexes a file, generating a key for it using a
  - backend, and then moving it into the annex directory and setting up
@@ -68,7 +73,7 @@ lockDown file = do
 
 {- Moves a locked down file into the annex.
  -
- - In direct mode, leaves the file alone, and just updates bookeeping
+ - In direct mode, leaves the file alone, and just updates bookkeeping
  - information.
  -}
 ingest :: KeySource -> Annex (Maybe Key)
@@ -146,11 +151,20 @@ link file key hascontent = handle (undo file key) $ do
 {- Note: Several other commands call this, and expect it to 
  - create the symlink and add it. -}
 cleanup :: FilePath -> Key -> Bool -> CommandCleanup
-cleanup file key hascontent = do
-	_ <- link file key hascontent
-	params <- ifM (Annex.getState Annex.force)
-		( return [Param "-f"]
-		, return []
-		)
-	Annex.Queue.addCommand "add" (params++[Param "--"]) [file]
-	return True
+cleanup file key hascontent = ifM isDirect
+	( do
+		l <- calcGitLink file key
+		sha <- inRepo $ Git.HashObject.hashObject BlobObject l
+		Annex.Queue.addUpdateIndex =<<
+			inRepo (Git.UpdateIndex.stageSymlink file sha)
+		logStatus key InfoPresent
+		return True
+	, do
+		_ <- link file key hascontent
+		params <- ifM (Annex.getState Annex.force)
+			( return [Param "-f"]
+			, return []
+			)
+		Annex.Queue.addCommand "add" (params++[Param "--"]) [file]
+		return True
+	)

debian/changelog

@@ -4,7 +4,8 @@ git-annex (3.20130105) UNRELEASED; urgency=low
   * committer: Fix a file handle leak.
   * assistant: Make expensive transfer scan work fully in direct mode.
   * More commands work in direct mode repositories: find, whereis, move, copy,
-    drop, log, fsck.
+    drop, log, fsck, add.
+  * sync: No longer automatically adds files in direct mode.
   * assistant: Detect when system is not configured with a user name,
     and set environment to prevent git from failing.
   * direct: Avoid hardlinking symlinks that point to the same content