Commit graph

2198 commits

Author SHA1 Message Date
Joey Hess
0b59fb423e
migrate: Copy over metadata to new key. 2016-01-07 14:21:12 -04:00
Joey Hess
03cb2c8ece
unused: Bug fix when a new file was added to the annex, and then removed (but not git rmed). git still has the add staged in this case, so the content should not be unused and was wrongly treated as such.
So, we need to look at both the file on disk to see if it's a annex link,
and the file in the index too. lookupFile doesn't look in the index if the file
is not present on disk.
2016-01-06 16:49:41 -04:00
Joey Hess
d667a68b7e
test: Added --keep-failures option. 2016-01-06 13:44:12 -04:00
Joey Hess
b96cfdc094
whereis --json: Make url list be included in machine-parseable form. 2016-01-06 12:33:32 -04:00
Joey Hess
121659576b
info --json: Improve json for "backend usage", using a nested object with fields for each backend instead of the previous weird nested lists. This may break existing parsers of this json output, if there were any. 2016-01-01 16:33:05 -04:00
Joey Hess
09a2fcb643
info: Fix "backend usage" numbers, which were counting present keys twice.
Let's just count the referenced keys for that, and not present keys at all.
2016-01-01 16:13:16 -04:00
Joey Hess
4eab4bdb01
started working on testing v6 unlocked files
Many failures.
2016-01-01 14:04:43 -04:00
Joey Hess
cdad377ef1
Debian: Adjust build dependencies for webapp, DAV.
Now available on mips, mipsel, but temporarily removed armel since build is
failing there.

If armel would just get caught up, I could remove the per-arch specs
entirely.

Maybe time to turn maint of this over to richih?
2015-12-28 12:57:15 -04:00
Joey Hess
121f5d5b0c
annex.thin
Decided it's too scary to make v6 unlocked files have 1 copy by default,
but that should be available to those who need it. This is consistent with
git-annex not dropping unused content without --force, etc.

* Added annex.thin setting, which makes unlocked files in v6 repositories
  be hard linked to their content, instead of a copy. This saves disk
  space but means any modification of an unlocked file will lose the local
  (and possibly only) copy of the old version.
* Enable annex.thin by default on upgrade from direct mode to v6, since
  direct mode made the same tradeoff.
* fix: Adjusts unlocked files as configured by annex.thin.
2015-12-27 15:59:59 -04:00
Joey Hess
bb6719678e
update walkthrough and add tip about using v6 unlocked files
The walkthrough should make sense now both for v5 and v6 repo users.
2015-12-26 16:47:23 -04:00
Joey Hess
41b2caa5f6
reword 2015-12-26 13:06:53 -04:00
Joey Hess
87f0708f88
persistent-sqlite is now a hard build dependency, since v6 repository mode needs it. 2015-12-26 13:00:52 -04:00
Joey Hess
39048e4568
Merge branch 'master' into smudge 2015-12-22 18:10:40 -04:00
Joey Hess
a82b7d0044
update 2015-12-22 18:04:43 -04:00
Joey Hess
2dce8081a6
addurl: Added --with-files option. 2015-12-22 12:20:39 -04:00
Joey Hess
ca2c977704
wip v6 support for assistant
Files are not yet added to v6 repos in unlocked mode.
2015-12-21 18:41:15 -04:00
Joey Hess
d82b110da8
Merge branch 'master' into smudge 2015-12-21 17:12:46 -04:00
Joey Hess
a8b398c1fa
addurl: Added --batch option. 2015-12-21 12:57:13 -04:00
Joey Hess
35827e2705
status: On crippled filesystems, was displaying M for all annexed files that were present. Probably caused by a change to what git status displays in this situation. Fixed by treating files git thinks are modified the same as typechanged files. 2015-12-19 13:36:40 -04:00
Joey Hess
f1a73de560
prep release 2015-12-18 12:09:55 -04:00
Joey Hess
029111b89a
Merge branch 'master' into smudge 2015-12-16 13:07:46 -04:00
Joey Hess
96dd0f4ebe
improve temp dir security
http://bugs.debian.org/807341

* Fix insecure temporary permissions when git-annex repair is used in
  in a corrupted git repository.

  Other calls to withTmpDir didn't leak any potentially private data,
  but repair clones the git repository to a temp directory which is made
  using the user's umask. Thus, it might expose a git repo that is
  otherwise locked down.

* Fix potential denial of service attack when creating temp dirs.

  Since withTmpDir used easily predictable temporary directory names,
  an attacker could create foo.0, foo.1, etc and as long as it managed to
  keep ahead of it, could prevent it from ever returning.

  I'd rate this as a low utility DOS attack. Most attackers in a position
  to do this could just fill up the disk /tmp is on to prevent anything
  from writing temp files. And few parts of git-annex use withTmpDir
  anyway, so DOS potential is quite low.

Examined all callers of withTmpDir and satisfied myself that
switching to mkdtmp and so getting a mode 700 temp dir wouldn't break any
of them.

Note that withTmpDirIn continues to not force temp dir to 700.
But it's only used for temp directories inside .git/annex/wherever/
so that is not a problem.

Also re-audited all other uses of temp files and dirs in git-annex.
2015-12-15 20:21:48 -04:00
Joey Hess
7d0e79b9e1
Use git-annex init --version=6 to get v6 for now
Not ready to make it default because of the direct mode upgrade needing to
all happen at once.
2015-12-15 17:17:13 -04:00
Joey Hess
3ba6d84559
clarify 2015-12-15 14:18:44 -04:00
Joey Hess
8a660a7b14
add: In v6 mode, acts on modified files.
Same as was done in direct mode, except in v6 mode add always adds files
locked, so
2015-12-15 14:17:00 -04:00
Joey Hess
f5d4ee9b63
Merge branch 'master' into smudge 2015-12-15 12:01:21 -04:00
Joey Hess
04e00146ed
Debian: Build depend on concurrent-output.
In unstable now.
2015-12-12 12:19:31 -04:00
Joey Hess
c608a752a5
Merge branch 'master' into smudge 2015-12-11 13:50:31 -04:00
Joey Hess
abd66c7089
fsck: Failed to honor annex.diskreserve when checking a remote. 2015-12-11 13:50:27 -04:00
Joey Hess
0f126440ca
webdav: When testing the WebDAV server, send a file with content. The empty file it was sending tickled bugs in some php WebDAV server. 2015-12-11 12:13:20 -04:00
Joey Hess
e2c8dc6778
v6 git-annex unlock
Note that the implementation uses replaceFile, so that the actual
replacement of the work tree file is atomic. This seems a good property to
have!

It would be possible for unlock in v6 mode to be run on files that do not
have their content present. However, that would be a behavior change from
before, and I don't see any immediate need to support it, so I didn't
implement it.
2015-12-10 16:12:48 -04:00
Joey Hess
3d936fdb59
Merge branch 'master' into smudge 2015-12-10 14:07:11 -04:00
Joey Hess
a0528db092
Add S3 features to git-annex version output. 2015-12-10 11:42:49 -04:00
Joey Hess
3719d1b390
make clear when code is using deprecated direct mode files 2015-12-09 19:43:15 -04:00
Joey Hess
bf98d2bd77
Merge branch 'master' into smudge 2015-12-09 17:58:59 -04:00
Joey Hess
e74e612945
prep release 2015-12-08 11:14:28 -04:00
Joey Hess
63c466449f
wording 2015-12-07 12:30:10 -04:00
Joey Hess
62a2fba1cd
Merge branch 'master' into smudge 2015-12-07 12:29:34 -04:00
Joey Hess
2936153fc4
fix temp filename
Was not putting it inside the temp dir, but next to it!

This was just wrong, and it led to a longer filename that desired being
used, leading to some bug reports.
2015-12-06 16:54:01 -04:00
Joey Hess
2fe21d47c5
init: Configure .git/info/attributes to use git-annex as a smudge filter.
Note that this changes the default behavior of git add in a newly
initialized repository; it will add files to the annex.

Don't like that this could break workflows, but it's necessary in order for
any pointer files in the repo to be handled by git-annex.
2015-12-04 17:57:15 -04:00
Joey Hess
ccc49861ca
add v6; keep v5 working for now and manual upgrade
Since all places where a repo is used in direct mode need to have git-annex
upgraded before the repo can safely be converted to v6, the upgrade needs
to be manual for now.

I suppose that at some point I'll want to drop all the direct mode support
code. At that point, will stop supporting v5, and will need to auto-upgrade
any remaining v5 repos. If possible, I'd like to carry the direct mode
support for say, a year or so, to give people plenty of time to upgrade and
avoid disruption.
2015-12-04 16:14:48 -04:00
Joey Hess
37a5e2d419
dropunused: Make more robust when trying to drop an object that has already been dropped.
Before it crashed trying to lock the not-present content and prevented
dropping anything else. Instead, succeed.
2015-12-03 15:58:00 -04:00
Joey Hess
e9f43c07f9
webapp: Fix bugs that could result in a relative path such as "." being written to ~/.config/git-annex/autostart
and ignore any such  relative paths in the file

This was a reversion caused by the relative path changes in 5.20150113.
2015-12-02 15:57:30 -04:00
Joey Hess
f16e235983
addurl, importfeed: Changed to honor annex.largefiles settings, when the content of the url is downloaded. (Not when using --fast or --relaxed.)
importfeed just calls addurl functions, so inherits this from it.

Note that addurl still generates a temp file, and uses that key to download
the file. It just adds it to the work tree at the end when the file is small.
2015-12-02 15:12:33 -04:00
Joey Hess
dc8099872a
import: Changed to honor annex.largefiles settings. 2015-12-02 14:49:03 -04:00
Joey Hess
f7d63a0117
tahoe: Include tahoe capabilities in whereis display. 2015-11-30 15:35:53 -04:00
Joey Hess
0d432dd1a4
annex object file mode for core.sharedRepository
When core.sharedRepository is set, annex object files are not made mode
444, since that prevents a user other than the file owner from locking
them. Instead, a mode such as 664 is used in this case.
2015-11-18 15:45:32 -04:00
Joey Hess
c2674308c0
map: Improve display of git remotes with non-ssh urls, including http and gcrypt. 2015-11-18 15:08:55 -04:00
Joey Hess
e97fce35a6
Display progress meter in -J mode when downloading from the web.
Including in addurl, and get --from web, but also in S3 and External
special remotes when a web url is known for content in those remotes.
2015-11-16 21:00:54 -04:00
Joey Hess
7943442dff
Display progress meter in -J mode when copying from a local git repo, to a local git repo, and from a remote git repo.
Had everything available, just didn't combine the progress meter with the
other places progress is sent to update it. (And to a remote repo already
did show progress.)

Most special remotes should already display progress meters with -J,
same as without it. One exception to this is the web, since it relies on
wget/curl progress display without -J. Still todo..
2015-11-16 19:32:30 -04:00
Joey Hess
9f7e4ed811
Build with -j1 again to get reproducible build.
This was in the cabal file earlier, and was removed because it broke the
android cross build. Moving to the git-annex target of the Makefile
will make it be used for Debian packages etc but not android cross builds
or make fast or when users build with cabal.
2015-11-16 16:51:24 -04:00
Joey Hess
2864dc6d15
typo 2015-11-16 15:53:30 -04:00
Joey Hess
b5df6c7b93
prep release 2015-11-16 14:18:01 -04:00
Joey Hess
6fc01da184
wording 2015-11-16 11:39:45 -04:00
Joey Hess
bb86eebfbd
init: Automatically enable annex.pidlock when necessary. 2015-11-13 13:35:29 -04:00
Joey Hess
aa4192aea6
pid locking configuration and abstraction layer for git-annex
(not actually used anywhere yet)
2015-11-12 17:50:34 -04:00
Joey Hess
7c741302cc
assistant: Pass ssh-options through 3 more git pull/push calls that were missed before.
It was used for regular pull, but not for regular push, tagged push, or the
fallback fetching.
2015-11-10 16:52:30 -04:00
Joey Hess
4b02af57b6
display a message in the unlikely scenario of fsking a dead repository 2015-11-10 14:44:58 -04:00
Joey Hess
cd7929034a
fsck: When fscking a dead repo, avoid incorrect "fixing location log" message.
keyLocations doesn't return locations in dead repos, but if we're fscking a
dead repo, we want to look at what locations are actually logged for it.
2015-11-10 13:59:04 -04:00
Joey Hess
361d31fde7
Make git-annex-standalone.deb include the git-annex html documentation, desktop file, and base completion file, same as the regular git-annex.deb.
It already had a doc-base file relating to the html documentation, and
there's no reason not to include the other stuff.
2015-11-10 13:21:05 -04:00
Joey Hess
d9d87fdbc9
Make the git-annex-standalone.deb prevent runshell from installing wrappers into $HOME/.ssh 2015-11-10 12:53:46 -04:00
Joey Hess
3e49f9fcab
runshell: Avoid failing when $HOME/.ssh does not exist and cannot be created. 2015-11-10 11:42:06 -04:00
Joey Hess
08bb3b1b1d
quvi may output utf-8 encoded data when the conifigured locale doesn't support that; avoid crashing on such invalid encoding. 2015-11-09 12:19:23 -04:00
Joey Hess
7938b87864
add: Fix error recovery rollback to not move the injested file content out of the annex back to the file, because other files may point to that same content. Instead, copy the injected file content out to recover.
That was not a data loss, but it came close!
2015-11-06 15:28:20 -04:00
Joey Hess
51e60259e1
fix replaceFile makeAnnexLink race
replaceFile created a temp file, which was guaranteed to not overlap with
another temp file. However, makeAnnexLink then deleted that file, in
preparation for making the symlink in its place. This caused a race, since
some other replaceFile could create a temp file, using the same name!

I was able to reproduce the race easily running git-annex add -J10 in a
directory with 100 files (all with different contents). Some files would
get ingested into the annex, but their annex links would fail to be added.

There could be other situations where this same problem could occur.
Perhaps when the assistant is adding a file, if the user manually also ran
git-annex add. Perhaps in cases not involving adding a file.

The new replaceFile makes a temprary directory, which is guaranteed to be
unique, and doesn't make a temp file in there. makeAnnexLink can thus
create the symlink without problem and the race is avoided.

Audited all calls to replaceFile to make sure that the old behavior of
providing an empty temp file was not relied on.

The general problem of asking for a temp file and deleting it as part of
the process of using it could reach beyond replaceFile. Did some quick
audits and didn't find other cases of it. Probably only symlink creation
stuff would tend to make that mistake, mostly.
2015-11-06 15:08:19 -04:00
Joey Hess
416c7656a1
Concurrent progress bars are now displayed when using -J with a command that moves file contents around. 2015-11-06 13:44:57 -04:00
Joey Hess
7dc90f2225
import: Avoid very ugly error messages when the directory files are imported to is not a directort, but perhaps an annexed file. 2015-11-05 18:46:05 -04:00
Joey Hess
5db7d435e7
-J for add/addurl/import 2015-11-05 18:24:15 -04:00
Joey Hess
c4d45ef83d
drop -Jn 2015-11-04 17:13:20 -04:00
Joey Hess
3d0f41518d
parallel fsck (yes, these changes are all it takes now!) 2015-11-04 16:28:14 -04:00
Joey Hess
4fd03ccd7b
concurrent-output, first pass
Output without -Jn should be unchanged from before. With -Jn,
concurrent-output is used for messages, but regions are not used yet, so
it's a mess.
2015-11-04 13:45:34 -04:00
Joey Hess
61987c6983
point release for cabal file fixes
Seems that some changes to the cabal file a few months ago resulted in a
git-annex that broke stackage infrastructure.
2015-11-03 12:10:01 -04:00
Joey Hess
628429f1b0
When cabal install is run with the desktop file location not writable, display a warning, but continue successfully.
Installing the desktop file etc is a niceity of git-annex's cabal install,
but not a requirement.

closes https://github.com/fpco/stackage/issues/726
2015-11-03 10:47:33 -04:00
Joey Hess
0717ad4440
Avoid installing desktop file and program file if cabal install git-annex is run as root, since that is not a systemwide install, but to /root, and so generating a systemwide desktop file is not right. 2015-11-03 10:38:08 -04:00
Joey Hess
29d250923b
prep release 2015-11-02 12:41:33 -04:00
Joey Hess
4153507864
Fix failure to build with aws-0.13.0 and finish nearline support.
* Fix failure to build with aws-0.13.0.
* When built with aws-0.13.0, the S3 special remote can be used to create
  google nearline buckets, by setting storageclass=NEARLINE.
2015-11-02 11:14:03 -04:00
Joey Hess
ef5496b8de
Catch up with current git behavior when both repo and repo.git exist; it seems it now prefers repo in this case, although historically it may have preferred repo.git. 2015-10-26 15:35:55 -04:00
Joey Hess
640dba43b6
enableremote: List uuids and descriptions of remotes that can be enabled, and accept either the uuid or the description in leu if the name. 2015-10-26 14:55:40 -04:00
Henrik Ahlgren
87a00e3608
Changelog typo: remove, not remote 2015-10-21 10:10:55 -04:00
Joey Hess
268800d590
Symlink timestamp preservation code uses functions from unix-2.7.0 when available, which should be more portable. 2015-10-21 02:22:18 -04:00
Joey Hess
b9c6a56b0e
Use statvfs on OSX.
Fixes a recent-ish build warning on about 64 bit vs non.

This is the method used by the disk-free-space library, and I tested it to
yield the same results on even 10 tb drives on OSX -- so it's getting 64
bit values.
2015-10-19 17:09:06 -04:00
Joey Hess
b1c0b7175f
Debian: Remote menu file, since a desktop file is provided and lintian says there can be only one. 2015-10-19 14:23:48 -04:00
Joey Hess
4cc892f938
prep release 2015-10-19 14:08:14 -04:00
Joey Hess
806819be57
Avoid displaying network transport warning when a ssh remote does not yet have an annex.uuid set.
Instead, only display transport error if the configlist output doesn't
include an annex.uuid line, even an empty one.

A recent change made git-annex init try to get all the remote uuids, and so
the transport error would be displayed by it. It was also displayed when
eg, copying files to a remote that had no uuid yet.
2015-10-15 15:36:54 -04:00
Joey Hess
27eaa6f410
avoid making post-merge-conflict-resolution commit when no conflicts were resolved
sync, merge, assistant: When git merge failed for a reason other than a
conflicted merge, such as a crippled filesystem not allowing particular
characters in filenames, git-annex would make a merge commit that could
omit such files or otherwise be bad. Fixed by aborting the whole merge
process when git merge fails for any reason other than a merge conflict.
2015-10-15 14:22:46 -04:00
Joey Hess
c32a2429ed
S3: Fix support for using https.
Was using the http-only Manager before, not the tls-capable one.
2015-10-15 10:37:06 -04:00
Joey Hess
9e90c033d3
Changed drop ordering when using git annex sync --content or the assistant, to drop from remotes first and from the local repo last. This works better with the behavior changes to drop in many cases. 2015-10-14 12:33:02 -04:00
Joey Hess
f9adb905fc
Avoid unncessary write to the location log when a file is unlocked and then added back with unchanged content.
Implemented with no additional overhead of compares etc.

This is safe to do for presence logs because of their locality of change;
a given repo's presence logs are only ever changed in that repo, or in a
repo that has just been actively changing the content of that repo.

So, we don't need to worry about a split-brain situation where there'd
be disagreement about the location of a key in a repo. And so, it's ok to
not update the timestamp when that's the only change that would be made
due to logging presence info.
2015-10-12 14:46:47 -04:00
Joey Hess
6145f905e0
improve display when lockcontent fails
/dev/null stderr; ssh is still able to display a password prompt
despite this

Show some messages so the user knows it's locking a remote, and
knows if that locking failed.
2015-10-09 17:31:02 -04:00
Joey Hess
6d4f741d5f
cleanup changelog 2015-10-09 16:18:16 -04:00
Joey Hess
cf79dffa4c
improve drop proof code 2015-10-09 11:09:46 -04:00
Joey Hess
5240a9f315
git-annex-shell: Added lockcontent command, to prevent dropping of key's content. 2015-10-08 14:47:46 -04:00
Joey Hess
976110b992 Debian: Remove dependency on transformers library, as it is now included in ghc.
Backporters will need to revert this.
2015-10-07 12:26:48 -04:00
Joey Hess
61c45072e6 Debian: Add torrent library to build-depends as it's packaged now, and stop recommending bittornado | bittorrent. 2015-10-07 09:08:37 -04:00
Joey Hess
1ac79e6fe5 copy --auto was checking the wrong repo's preferred content. (--from was checking what --to should, and vice-versa.) Fixed this bug, which was introduced in version 5.20150727. 2015-10-06 17:29:44 -04:00
Joey Hess
933fef6ae0 Merge branch 'winprocfix' 2015-10-04 15:46:25 -04:00
Joey Hess
06f1f03e7a Ported disk free space checking code to work on Solaris.
On Solaris, using f_bsize provided a value that is apparently much larger
than the real block size. The solaris docs for statvfs say
f_bsize is the "preferred" file system block size, and I guess the
filesystem prefers larger blocks, but uses smaller ones or something.
The docs also say that f_frsize is the "fundamental" block size.

Switched to using f_frsize on Linux and kFreeBSD too, since I guess
f_bsize could in theory vary the same way there too. Assuming that Solaris
is not violating the posix spec, I guess the linux man page for statvfs
is not as well written and I misunderstood it.
2015-10-02 16:31:15 -04:00
Joey Hess
16d7035ef7 Allow building with S3 disabled again. 2015-10-02 12:12:02 -04:00
Joey Hess
2fb3722ce9 Do verification of checksums of annex objects downloaded from remotes.
* When annex objects are received into git repositories, their checksums are
  verified then too.
* To get the old, faster, behavior of not verifying checksums, set
  annex.verify=false, or remote.<name>.annex-verify=false.
* setkey, rekey: These commands also now verify that the provided file
  matches the key, unless annex.verify=false.
* reinject: Already verified content; this can now be disabled by
  setting annex.verify=false.

recvkey and reinject already did verification, so removed now duplicate
code from them. fsck still does its own verification, which is ok since it
does not use getViaTmp, so verification doesn't happen twice when using fsck
--from.
2015-10-01 15:56:39 -04:00
Joey Hess
d4d880c1a4 prep release 2015-09-30 14:32:45 -04:00