git-annex/Annex/Content.hs

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{- git-annex file content managing
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-
- Copyright 2010-2013 Joey Hess <joey@kitenet.net>
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-
- Licensed under the GNU GPL version 3 or higher.
-}
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{-# LANGUAGE CPP #-}
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module Annex.Content (
inAnnex,
inAnnexSafe,
inAnnexCheck,
lockContent,
getViaTmp,
getViaTmpChecked,
getViaTmpUnchecked,
withTmp,
checkDiskSpace,
moveAnnex,
sendAnnex,
prepSendAnnex,
removeAnnex,
fromAnnex,
moveBad,
getKeysPresent,
saveState,
downloadUrl,
preseedTmp,
freezeContent,
thawContent,
dirKeys,
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withObjectLoc,
) where
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import System.IO.Unsafe (unsafeInterleaveIO)
import System.PosixCompat.Files
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import Common.Annex
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import Logs.Location
import qualified Git
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import qualified Annex
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import qualified Annex.Queue
import qualified Annex.Branch
import Utility.DiskFree
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import Utility.FileMode
import qualified Annex.Url as Url
import Types.Key
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import Utility.DataUnits
import Utility.CopyFile
import Config
import Git.SharedRepository
import Annex.Perms
import Annex.Link
import Annex.Content.Direct
import Annex.ReplaceFile
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import Annex.Exception
{- Checks if a given key's content is currently present. -}
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inAnnex :: Key -> Annex Bool
inAnnex key = inAnnexCheck key $ liftIO . doesFileExist
{- Runs an arbitrary check on a key's content. -}
inAnnexCheck :: Key -> (FilePath -> Annex Bool) -> Annex Bool
inAnnexCheck key check = inAnnex' id False check key
{- Generic inAnnex, handling both indirect and direct mode.
-
- In direct mode, at least one of the associated files must pass the
- check. Additionally, the file must be unmodified.
-}
inAnnex' :: (a -> Bool) -> a -> (FilePath -> Annex a) -> Key -> Annex a
inAnnex' isgood bad check key = withObjectLoc key checkindirect checkdirect
where
checkindirect loc = do
whenM (fromRepo Git.repoIsUrl) $
error "inAnnex cannot check remote repo"
check loc
checkdirect [] = return bad
checkdirect (loc:locs) = do
r <- check loc
if isgood r
then ifM (goodContent key loc)
( return r
, checkdirect locs
)
else checkdirect locs
{- A safer check; the key's content must not only be present, but
- is not in the process of being removed. -}
inAnnexSafe :: Key -> Annex (Maybe Bool)
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inAnnexSafe = inAnnex' (fromMaybe False) (Just False) go
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where
go f = liftIO $ openforlock f >>= check
#ifndef mingw32_HOST_OS
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openforlock f = catchMaybeIO $
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openFd f ReadOnly Nothing defaultFileFlags
#else
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openforlock _ = return $ Just ()
#endif
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check Nothing = return is_missing
#ifndef mingw32_HOST_OS
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check (Just h) = do
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v <- getLock h (ReadLock, AbsoluteSeek, 0, 0)
closeFd h
return $ case v of
Just _ -> is_locked
Nothing -> is_unlocked
#else
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check (Just _) = return is_unlocked
#endif
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#ifndef mingw32_HOST_OS
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is_locked = Nothing
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#endif
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is_unlocked = Just True
is_missing = Just False
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{- Content is exclusively locked while running an action that might remove
- it. (If the content is not present, no locking is done.) -}
lockContent :: Key -> Annex a -> Annex a
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#ifndef mingw32_HOST_OS
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lockContent key a = do
file <- calcRepo $ gitAnnexLocation key
bracketIO (openforlock file >>= lock) unlock (const a)
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where
{- Since files are stored with the write bit disabled, have
- to fiddle with permissions to open for an exclusive lock. -}
openforlock f = catchMaybeIO $ ifM (doesFileExist f)
( withModifiedFileMode f
(`unionFileModes` ownerWriteMode)
open
, open
)
where
open = openFd f ReadWrite Nothing defaultFileFlags
lock Nothing = return Nothing
lock (Just fd) = do
v <- tryIO $ setLock fd (WriteLock, AbsoluteSeek, 0, 0)
case v of
Left _ -> error "content is locked"
Right _ -> return $ Just fd
unlock Nothing = noop
unlock (Just l) = closeFd l
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#else
lockContent _key a = a -- no locking for Windows!
#endif
{- Runs an action, passing it a temporary filename to get,
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- and if the action succeeds, moves the temp file into
- the annex as a key's content. -}
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getViaTmp :: Key -> (FilePath -> Annex Bool) -> Annex Bool
getViaTmp = getViaTmpChecked (return True)
{- Like getViaTmp, but does not check that there is enough disk space
- for the incoming key. For use when the key content is already on disk
- and not being copied into place. -}
getViaTmpUnchecked :: Key -> (FilePath -> Annex Bool) -> Annex Bool
getViaTmpUnchecked = finishGetViaTmp (return True)
getViaTmpChecked :: Annex Bool -> Key -> (FilePath -> Annex Bool) -> Annex Bool
getViaTmpChecked check key action = do
tmp <- fromRepo $ gitAnnexTmpLocation key
-- Check that there is enough free disk space.
-- When the temp file already exists, count the space
-- it is using as free.
e <- liftIO $ doesFileExist tmp
alreadythere <- if e
then fromIntegral . fileSize <$> liftIO (getFileStatus tmp)
else return 0
ifM (checkDiskSpace Nothing key alreadythere)
( do
when e $ thawContent tmp
finishGetViaTmp check key action
, return False
)
finishGetViaTmp :: Annex Bool -> Key -> (FilePath -> Annex Bool) -> Annex Bool
finishGetViaTmp check key action = do
tmpfile <- prepTmp key
ifM (action tmpfile <&&> check)
( do
moveAnnex key tmpfile
logStatus key InfoPresent
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return True
, do
-- the tmp file is left behind, in case caller wants
-- to resume its transfer
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return False
)
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prepTmp :: Key -> Annex FilePath
prepTmp key = do
tmp <- fromRepo $ gitAnnexTmpLocation key
createAnnexDirectory (parentDir tmp)
return tmp
{- Creates a temp file, runs an action on it, and cleans up the temp file. -}
withTmp :: Key -> (FilePath -> Annex a) -> Annex a
withTmp key action = do
tmp <- prepTmp key
res <- action tmp
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liftIO $ nukeFile tmp
return res
{- Checks that there is disk space available to store a given key,
- in a destination (or the annex) printing a warning if not. -}
checkDiskSpace :: Maybe FilePath -> Key -> Integer -> Annex Bool
checkDiskSpace destination key alreadythere = do
reserve <- annexDiskReserve <$> Annex.getGitConfig
free <- liftIO . getDiskFree =<< dir
force <- Annex.getState Annex.force
case (free, keySize key) of
(Just have, Just need) -> do
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let ok = (need + reserve <= have + alreadythere) || force
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unless ok $
needmorespace (need + reserve - have - alreadythere)
return ok
_ -> return True
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where
dir = maybe (fromRepo gitAnnexDir) return destination
needmorespace n =
warning $ "not enough free space, need " ++
roughSize storageUnits True n ++
" more" ++ forcemsg
forcemsg = " (use --force to override this check or adjust annex.diskreserve)"
{- Moves a key's content into .git/annex/objects/
-
- In direct mode, moves it to the associated file, or files.
-
- What if the key there already has content? This could happen for
- various reasons; perhaps the same content is being annexed again.
- Perhaps there has been a hash collision generating the keys.
-
- The current strategy is to assume that in this case it's safe to delete
- one of the two copies of the content; and the one already in the annex
- is left there, assuming it's the original, canonical copy.
-
- I considered being more paranoid, and checking that both files had
- the same content. Decided against it because A) users explicitly choose
- a backend based on its hashing properties and so if they're dealing
- with colliding files it's their own fault and B) adding such a check
- would not catch all cases of colliding keys. For example, perhaps
- a remote has a key; if it's then added again with different content then
- the overall system now has two different peices of content for that
- key, and one of them will probably get deleted later. So, adding the
- check here would only raise expectations that git-annex cannot truely
- meet.
-}
moveAnnex :: Key -> FilePath -> Annex ()
moveAnnex key src = withObjectLoc key storeobject storedirect
where
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storeobject dest = ifM (liftIO $ doesFileExist dest)
( alreadyhave
, modifyContent dest $ do
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liftIO $ moveFile src dest
freezeContent dest
)
storeindirect = storeobject =<< calcRepo (gitAnnexLocation key)
{- In direct mode, the associated file's content may be locally
- modified. In that case, it's preserved. However, the content
- we're moving into the annex may be the only extant copy, so
- it's important we not lose it. So, when the key's content
- cannot be moved to any associated file, it's stored in indirect
- mode.
-}
storedirect = storedirect' storeindirect
storedirect' fallback [] = fallback
storedirect' fallback (f:fs) = do
thawContent src
v <- isAnnexLink f
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if Just key == v
then do
updateInodeCache key src
replaceFile f $ liftIO . moveFile src
chmodContent f
forM_ fs $
addContentWhenNotPresent key f
else ifM (goodContent key f)
( storedirect' alreadyhave fs
, storedirect' fallback fs
)
alreadyhave = liftIO $ removeFile src
{- Runs an action to transfer an object's content.
-
- In direct mode, it's possible for the file to change as it's being sent.
- If this happens, runs the rollback action and returns False. The
- rollback action should remove the data that was transferred.
-}
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sendAnnex :: Key -> Annex () -> (FilePath -> Annex Bool) -> Annex Bool
sendAnnex key rollback sendobject = go =<< prepSendAnnex key
where
go Nothing = return False
go (Just (f, checksuccess)) = do
r <- sendobject f
ifM checksuccess
( return r
, do
rollback
return False
)
{- Returns a file that contains an object's content,
- and an check to run after the transfer is complete.
-
- In direct mode, it's possible for the file to change as it's being sent,
- and the check detects this case and returns False.
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-
- Note that the returned check action is, in some cases, run in the
- Annex monad of the remote that is receiving the object, rather than
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- the sender. So it cannot rely on Annex state.
-}
prepSendAnnex :: Key -> Annex (Maybe (FilePath, Annex Bool))
prepSendAnnex key = withObjectLoc key indirect direct
where
indirect f = return $ Just (f, return True)
direct [] = return Nothing
direct (f:fs) = do
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cache <- recordedInodeCache key
-- check that we have a good file
ifM (sameInodeCache f cache)
( return $ Just (f, sameInodeCache f cache)
, direct fs
)
{- Performs an action, passing it the location to use for a key's content.
-
- In direct mode, the associated files will be passed. But, if there are
- no associated files for a key, the indirect mode action will be
- performed instead. -}
withObjectLoc :: Key -> (FilePath -> Annex a) -> ([FilePath] -> Annex a) -> Annex a
withObjectLoc key indirect direct = ifM isDirect
( do
fs <- associatedFiles key
if null fs
then goindirect
else direct fs
, goindirect
)
where
goindirect = indirect =<< calcRepo (gitAnnexLocation key)
cleanObjectLoc :: Key -> Annex () -> Annex ()
cleanObjectLoc key cleaner = do
file <- calcRepo $ gitAnnexLocation key
void $ tryAnnexIO $ thawContentDir file
cleaner
liftIO $ removeparents file (3 :: Int)
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where
removeparents _ 0 = noop
removeparents file n = do
let dir = parentDir file
maybe noop (const $ removeparents dir (n-1))
<=< catchMaybeIO $ removeDirectory dir
{- Removes a key's file from .git/annex/objects/
-
- In direct mode, deletes the associated files or files, and replaces
- them with symlinks. -}
removeAnnex :: Key -> Annex ()
removeAnnex key = withObjectLoc key remove removedirect
where
remove file = cleanObjectLoc key $ do
liftIO $ nukeFile file
removeInodeCache key
removedirect fs = do
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cache <- recordedInodeCache key
removeInodeCache key
mapM_ (resetfile cache) fs
resetfile cache f = whenM (sameInodeCache f cache) $ do
l <- inRepo $ gitAnnexLink f key
top <- fromRepo Git.repoPath
cwd <- liftIO getCurrentDirectory
let top' = fromMaybe top $ absNormPath cwd top
let l' = relPathDirToFile top' (fromMaybe l $ absNormPath top' l)
replaceFile f $ makeAnnexLink l'
{- Moves a key's file out of .git/annex/objects/ -}
fromAnnex :: Key -> FilePath -> Annex ()
fromAnnex key dest = cleanObjectLoc key $ do
file <- calcRepo $ gitAnnexLocation key
thawContent file
liftIO $ moveFile file dest
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{- Moves a key out of .git/annex/objects/ into .git/annex/bad, and
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- returns the file it was moved to. -}
moveBad :: Key -> Annex FilePath
moveBad key = do
src <- calcRepo $ gitAnnexLocation key
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bad <- fromRepo gitAnnexBadDir
let dest = bad </> takeFileName src
createAnnexDirectory (parentDir dest)
cleanObjectLoc key $
liftIO $ moveFile src dest
logStatus key InfoMissing
return dest
{- List of keys whose content exists in the annex. -}
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getKeysPresent :: Annex [Key]
getKeysPresent = do
direct <- isDirect
dir <- fromRepo gitAnnexObjectDir
liftIO $ traverse direct (2 :: Int) dir
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where
traverse direct depth dir = do
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contents <- catchDefaultIO [] (dirContents dir)
if depth == 0
then do
contents' <- filterM (present direct) contents
let keys = mapMaybe (fileKey . takeFileName) contents'
continue keys []
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else do
let deeper = traverse direct (depth - 1)
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continue [] (map deeper contents)
continue keys [] = return keys
continue keys (a:as) = do
{- Force lazy traversal with unsafeInterleaveIO. -}
morekeys <- unsafeInterleaveIO a
continue (morekeys++keys) as
{- In indirect mode, look for the key. In direct mode,
- the inode cache file is only present when a key's content
- is present. -}
present False d = doesFileExist $ contentfile d
present True d = doesFileExist $ contentfile d ++ ".cache"
contentfile d = d </> takeFileName d
{- Things to do to record changes to content when shutting down.
-
- It's acceptable to avoid committing changes to the branch,
- especially if performing a short-lived action.
-}
saveState :: Bool -> Annex ()
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saveState nocommit = doSideAction $ do
Annex.Queue.flush
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unless nocommit $
whenM (annexAlwaysCommit <$> Annex.getGitConfig) $
Annex.Branch.commit "update"
{- Downloads content from any of a list of urls. -}
downloadUrl :: [Url.URLString] -> FilePath -> Annex Bool
downloadUrl urls file = go =<< annexWebDownloadCommand <$> Annex.getGitConfig
where
go Nothing = do
opts <- map Param . annexWebOptions <$> Annex.getGitConfig
headers <- getHttpHeaders
anyM (\u -> Url.withUserAgent $ Url.download u headers opts file) urls
go (Just basecmd) = liftIO $ anyM (downloadcmd basecmd) urls
downloadcmd basecmd url =
boolSystem "sh" [Param "-c", Param $ gencmd url basecmd]
<&&> doesFileExist file
gencmd url = massReplace
[ ("%file", shellEscape file)
, ("%url", shellEscape url)
]
{- Copies a key's content, when present, to a temp file.
- This is used to speed up some rsyncs. -}
preseedTmp :: Key -> FilePath -> Annex Bool
preseedTmp key file = go =<< inAnnex key
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where
go False = return False
go True = do
ok <- copy
when ok $ thawContent file
return ok
copy = ifM (liftIO $ doesFileExist file)
( return True
, do
s <- calcRepo $ gitAnnexLocation key
liftIO $ copyFileExternal s file
)
{- Blocks writing to an annexed file, and modifies file permissions to
- allow reading it, per core.sharedRepository setting. -}
freezeContent :: FilePath -> Annex ()
freezeContent file = unlessM crippledFileSystem $
liftIO . go =<< fromRepo getSharedRepository
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where
go GroupShared = modifyFileMode file $
removeModes writeModes .
addModes [ownerReadMode, groupReadMode]
go AllShared = modifyFileMode file $
removeModes writeModes .
addModes readModes
go _ = modifyFileMode file $
removeModes writeModes .
addModes [ownerReadMode]
{- Adjusts read mode of annexed file per core.sharedRepository setting. -}
chmodContent :: FilePath -> Annex ()
chmodContent file = unlessM crippledFileSystem $
liftIO . go =<< fromRepo getSharedRepository
where
go GroupShared = modifyFileMode file $
addModes [ownerReadMode, groupReadMode]
go AllShared = modifyFileMode file $
addModes readModes
go _ = modifyFileMode file $
addModes [ownerReadMode]
{- Allows writing to an annexed file that freezeContent was called on
- before. -}
thawContent :: FilePath -> Annex ()
thawContent file = unlessM crippledFileSystem $
liftIO . go =<< fromRepo getSharedRepository
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where
go GroupShared = groupWriteRead file
go AllShared = groupWriteRead file
go _ = allowWrite file
{- Finds files directly inside a directory like gitAnnexBadDir
- (not in subdirectories) and returns the corresponding keys. -}
dirKeys :: (Git.Repo -> FilePath) -> Annex [Key]
dirKeys dirspec = do
dir <- fromRepo dirspec
ifM (liftIO $ doesDirectoryExist dir)
( do
contents <- liftIO $ getDirectoryContents dir
files <- liftIO $ filterM doesFileExist $
map (dir </>) contents
return $ mapMaybe (fileKey . takeFileName) files
, return []
)