git-annex/Command/Add.hs

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{- git-annex command
-
- Copyright 2010, 2013 Joey Hess <joey@kitenet.net>
-
- Licensed under the GNU GPL version 3 or higher.
-}
{-# LANGUAGE CPP #-}
module Command.Add where
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import Common.Annex
import Annex.Exception
import Command
import Types.KeySource
import Backend
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import Logs.Location
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import Annex.Content
import Annex.Content.Direct
import Annex.Perms
fully support core.symlinks=false in all relevant symlink handling code Refactored annex link code into nice clean new library. Audited and dealt with calls to createSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ createSymbolicLink linktarget file only when core.symlinks=true Assistant/WebApp/Configurators/Local.hs: createSymbolicLink link link test if symlinks can be made Command/Fix.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/FromKey.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/Indirect.hs: liftIO $ createSymbolicLink l f refuses to run if core.symlinks=false Init.hs: createSymbolicLink f f2 test if symlinks can be made Remote/Directory.hs: go [file] = catchBoolIO $ createSymbolicLink file f >> return True fast key linking; catches failure to make symlink and falls back to copy Remote/Git.hs: liftIO $ catchBoolIO $ createSymbolicLink loc file >> return True ditto Upgrade/V1.hs: liftIO $ createSymbolicLink link f v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to readSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ catchMaybeIO $ readSymbolicLink file only when core.symlinks=true Assistant/Threads/Watcher.hs: ifM ((==) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) code that fixes real symlinks when inotify sees them It's ok to not fix psdueo-symlinks. Assistant/Threads/Watcher.hs: mlink <- liftIO (catchMaybeIO $ readSymbolicLink file) ditto Command/Fix.hs: stopUnless ((/=) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) $ do command only works in indirect mode Upgrade/V1.hs: getsymlink = takeFileName <$> readSymbolicLink file v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to isSymbolicLink. (Typically used with getSymbolicLinkStatus, but that is just used because getFileStatus is not as robust; it also works on pseudolinks.) Remaining calls are all safe, because: Assistant/Threads/SanityChecker.hs: | isSymbolicLink s -> addsymlink file ms only handles staging of symlinks that were somehow not staged (might need to be updated to support pseudolinks, but this is only a belt-and-suspenders check anyway, and I've never seen the code run) Command/Add.hs: if isSymbolicLink s || not (isRegularFile s) avoids adding symlinks to the annex, so not relevant Command/Indirect.hs: | isSymbolicLink s -> void $ flip whenAnnexed f $ only allowed on systems that support symlinks Command/Indirect.hs: whenM (liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f) $ do ditto Seek.hs:notSymlink f = liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f used to find unlocked files, only relevant in indirect mode Utility/FSEvents.hs: | Files.isSymbolicLink s = runhook addSymlinkHook $ Just s Utility/FSEvents.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: checkfiletype Files.isSymbolicLink addSymlinkHook f Utility/Kqueue.hs: | Files.isSymbolicLink s = callhook addSymlinkHook (Just s) change all above are lower-level, not relevant Audited and dealt with calls to isSymLink. Remaining calls are all safe, because: Annex/Direct.hs: | isSymLink (getmode item) = This is looking at git diff-tree objects, not files on disk Command/Unused.hs: | isSymLink (LsTree.mode l) = do This is looking at git ls-tree, not file on disk Utility/FileMode.hs:isSymLink :: FileMode -> Bool Utility/FileMode.hs:isSymLink = checkMode symbolicLinkMode low-level Done!!
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import Annex.Link
import qualified Annex
import qualified Annex.Queue
#ifndef __ANDROID__
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import Utility.Touch
#endif
import Utility.FileMode
import Config
import Utility.InodeCache
import Annex.FileMatcher
def :: [Command]
def = [notBareRepo $ command "add" paramPaths seek SectionCommon
"add files to annex"]
{- Add acts on both files not checked into git yet, and unlocked files.
-
- In direct mode, it acts on any files that have changed. -}
seek :: [CommandSeek]
seek =
[ go withFilesNotInGit
, whenNotDirect $ go withFilesUnlocked
, whenDirect $ go withFilesMaybeModified
]
where
go a = withValue largeFilesMatcher $ \matcher ->
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a $ \file -> ifM (checkFileMatcher matcher file <||> Annex.getState Annex.force)
( start file
, stop
)
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{- The add subcommand annexes a file, generating a key for it using a
- backend, and then moving it into the annex directory and setting up
- the symlink pointing to its content. -}
start :: FilePath -> CommandStart
start file = ifAnnexed file addpresent add
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where
add = do
s <- liftIO $ getSymbolicLinkStatus file
if isSymbolicLink s || not (isRegularFile s)
then stop
else do
showStart "add" file
next $ perform file
addpresent (key, _) = ifM isDirect
( ifM (goodContent key file) ( stop , add )
, fixup key
)
fixup key = do
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-- fixup from an interrupted add; the symlink
-- is present but not yet added to git
showStart "add" file
liftIO $ removeFile file
next $ next $ cleanup file key =<< inAnnex key
{- The file that's being added is locked down before a key is generated,
- to prevent it from being modified in between. It's hard linked into a
- temporary location, and its writable bits are removed. It could still be
- written to by a process that already has it open for writing.
-
- Lockdown can fail if a file gets deleted, and Nothing will be returned.
-}
lockDown :: FilePath -> Annex (Maybe KeySource)
lockDown file = ifM (crippledFileSystem)
( liftIO $ catchMaybeIO $ do
cache <- genInodeCache file
return $ KeySource
{ keyFilename = file
, contentLocation = file
, inodeCache = cache
}
, do
tmp <- fromRepo gitAnnexTmpDir
createAnnexDirectory tmp
liftIO $ catchMaybeIO $ do
preventWrite file
(tmpfile, h) <- openTempFile tmp (takeFileName file)
hClose h
nukeFile tmpfile
createLink file tmpfile
cache <- genInodeCache tmpfile
return $ KeySource
{ keyFilename = file
, contentLocation = tmpfile
, inodeCache = cache
}
)
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{- Ingests a locked down file into the annex.
-
- In direct mode, leaves the file alone, and just updates bookkeeping
- information.
-}
ingest :: (Maybe KeySource) -> Annex (Maybe Key)
ingest Nothing = return Nothing
ingest (Just source) = do
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backend <- chooseBackend $ keyFilename source
k <- genKey source backend
cache <- liftIO $ genInodeCache $ contentLocation source
case (cache, inodeCache source) of
(_, Nothing) -> go k cache
(Just newc, Just c) | compareStrong c newc -> go k cache
_ -> failure
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where
go k cache = ifM isDirect ( godirect k cache , goindirect k cache )
goindirect (Just (key, _)) _ = do
handle (undo (keyFilename source) key) $
moveAnnex key $ contentLocation source
liftIO $ nukeFile $ keyFilename source
return $ Just key
goindirect Nothing _ = failure
godirect (Just (key, _)) (Just cache) = do
writeInodeCache key cache
finishIngestDirect key source
return $ Just key
godirect _ _ = failure
failure = do
when (contentLocation source /= keyFilename source) $
liftIO $ nukeFile $ contentLocation source
return Nothing
finishIngestDirect :: Key -> KeySource -> Annex ()
finishIngestDirect key source = do
void $ addAssociatedFile key $ keyFilename source
unlessM crippledFileSystem $
liftIO $ allowWrite $ keyFilename source
when (contentLocation source /= keyFilename source) $
liftIO $ nukeFile $ contentLocation source
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perform :: FilePath -> CommandPerform
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perform file =
maybe stop (\key -> next $ cleanup file key True)
=<< ingest =<< lockDown file
{- On error, put the file back so it doesn't seem to have vanished.
- This can be called before or after the symlink is in place. -}
undo :: FilePath -> Key -> IOException -> Annex a
undo file key e = do
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whenM (inAnnex key) $ do
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liftIO $ nukeFile file
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handle tryharder $ fromAnnex key file
logStatus key InfoMissing
throw e
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where
-- fromAnnex could fail if the file ownership is weird
tryharder :: IOException -> Annex ()
tryharder _ = do
src <- inRepo $ gitAnnexLocation key
liftIO $ moveFile src file
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{- Creates the symlink to the annexed content, returns the link target. -}
link :: FilePath -> Key -> Bool -> Annex String
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link file key hascontent = handle (undo file key) $ do
l <- calcGitLink file key
fully support core.symlinks=false in all relevant symlink handling code Refactored annex link code into nice clean new library. Audited and dealt with calls to createSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ createSymbolicLink linktarget file only when core.symlinks=true Assistant/WebApp/Configurators/Local.hs: createSymbolicLink link link test if symlinks can be made Command/Fix.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/FromKey.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/Indirect.hs: liftIO $ createSymbolicLink l f refuses to run if core.symlinks=false Init.hs: createSymbolicLink f f2 test if symlinks can be made Remote/Directory.hs: go [file] = catchBoolIO $ createSymbolicLink file f >> return True fast key linking; catches failure to make symlink and falls back to copy Remote/Git.hs: liftIO $ catchBoolIO $ createSymbolicLink loc file >> return True ditto Upgrade/V1.hs: liftIO $ createSymbolicLink link f v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to readSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ catchMaybeIO $ readSymbolicLink file only when core.symlinks=true Assistant/Threads/Watcher.hs: ifM ((==) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) code that fixes real symlinks when inotify sees them It's ok to not fix psdueo-symlinks. Assistant/Threads/Watcher.hs: mlink <- liftIO (catchMaybeIO $ readSymbolicLink file) ditto Command/Fix.hs: stopUnless ((/=) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) $ do command only works in indirect mode Upgrade/V1.hs: getsymlink = takeFileName <$> readSymbolicLink file v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to isSymbolicLink. (Typically used with getSymbolicLinkStatus, but that is just used because getFileStatus is not as robust; it also works on pseudolinks.) Remaining calls are all safe, because: Assistant/Threads/SanityChecker.hs: | isSymbolicLink s -> addsymlink file ms only handles staging of symlinks that were somehow not staged (might need to be updated to support pseudolinks, but this is only a belt-and-suspenders check anyway, and I've never seen the code run) Command/Add.hs: if isSymbolicLink s || not (isRegularFile s) avoids adding symlinks to the annex, so not relevant Command/Indirect.hs: | isSymbolicLink s -> void $ flip whenAnnexed f $ only allowed on systems that support symlinks Command/Indirect.hs: whenM (liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f) $ do ditto Seek.hs:notSymlink f = liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f used to find unlocked files, only relevant in indirect mode Utility/FSEvents.hs: | Files.isSymbolicLink s = runhook addSymlinkHook $ Just s Utility/FSEvents.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: checkfiletype Files.isSymbolicLink addSymlinkHook f Utility/Kqueue.hs: | Files.isSymbolicLink s = callhook addSymlinkHook (Just s) change all above are lower-level, not relevant Audited and dealt with calls to isSymLink. Remaining calls are all safe, because: Annex/Direct.hs: | isSymLink (getmode item) = This is looking at git diff-tree objects, not files on disk Command/Unused.hs: | isSymLink (LsTree.mode l) = do This is looking at git ls-tree, not file on disk Utility/FileMode.hs:isSymLink :: FileMode -> Bool Utility/FileMode.hs:isSymLink = checkMode symbolicLinkMode low-level Done!!
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makeAnnexLink l file
#ifndef __ANDROID__
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when hascontent $ do
-- touch the symlink to have the same mtime as the
-- file it points to
liftIO $ do
mtime <- modificationTime <$> getFileStatus file
touch file (TimeSpec mtime) False
#endif
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return l
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{- Note: Several other commands call this, and expect it to
fully support core.symlinks=false in all relevant symlink handling code Refactored annex link code into nice clean new library. Audited and dealt with calls to createSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ createSymbolicLink linktarget file only when core.symlinks=true Assistant/WebApp/Configurators/Local.hs: createSymbolicLink link link test if symlinks can be made Command/Fix.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/FromKey.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/Indirect.hs: liftIO $ createSymbolicLink l f refuses to run if core.symlinks=false Init.hs: createSymbolicLink f f2 test if symlinks can be made Remote/Directory.hs: go [file] = catchBoolIO $ createSymbolicLink file f >> return True fast key linking; catches failure to make symlink and falls back to copy Remote/Git.hs: liftIO $ catchBoolIO $ createSymbolicLink loc file >> return True ditto Upgrade/V1.hs: liftIO $ createSymbolicLink link f v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to readSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ catchMaybeIO $ readSymbolicLink file only when core.symlinks=true Assistant/Threads/Watcher.hs: ifM ((==) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) code that fixes real symlinks when inotify sees them It's ok to not fix psdueo-symlinks. Assistant/Threads/Watcher.hs: mlink <- liftIO (catchMaybeIO $ readSymbolicLink file) ditto Command/Fix.hs: stopUnless ((/=) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) $ do command only works in indirect mode Upgrade/V1.hs: getsymlink = takeFileName <$> readSymbolicLink file v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to isSymbolicLink. (Typically used with getSymbolicLinkStatus, but that is just used because getFileStatus is not as robust; it also works on pseudolinks.) Remaining calls are all safe, because: Assistant/Threads/SanityChecker.hs: | isSymbolicLink s -> addsymlink file ms only handles staging of symlinks that were somehow not staged (might need to be updated to support pseudolinks, but this is only a belt-and-suspenders check anyway, and I've never seen the code run) Command/Add.hs: if isSymbolicLink s || not (isRegularFile s) avoids adding symlinks to the annex, so not relevant Command/Indirect.hs: | isSymbolicLink s -> void $ flip whenAnnexed f $ only allowed on systems that support symlinks Command/Indirect.hs: whenM (liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f) $ do ditto Seek.hs:notSymlink f = liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f used to find unlocked files, only relevant in indirect mode Utility/FSEvents.hs: | Files.isSymbolicLink s = runhook addSymlinkHook $ Just s Utility/FSEvents.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: checkfiletype Files.isSymbolicLink addSymlinkHook f Utility/Kqueue.hs: | Files.isSymbolicLink s = callhook addSymlinkHook (Just s) change all above are lower-level, not relevant Audited and dealt with calls to isSymLink. Remaining calls are all safe, because: Annex/Direct.hs: | isSymLink (getmode item) = This is looking at git diff-tree objects, not files on disk Command/Unused.hs: | isSymLink (LsTree.mode l) = do This is looking at git ls-tree, not file on disk Utility/FileMode.hs:isSymLink :: FileMode -> Bool Utility/FileMode.hs:isSymLink = checkMode symbolicLinkMode low-level Done!!
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- create the link and add it.
-
- In direct mode, when we have the content of the file, it's left as-is,
- and we just stage a symlink to git.
-
- Otherwise, as long as the filesystem supports symlinks, we use
- git add, rather than directly staging the symlink to git.
- Using git add is best because it allows the queuing to work
- and is faster (staging the symlink runs hash-object commands each time).
- Also, using git add allows it to skip gitignored files, unless forced
- to include them.
-}
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cleanup :: FilePath -> Key -> Bool -> CommandCleanup
cleanup file key hascontent = do
when hascontent $
logStatus key InfoPresent
ifM (isDirect <&&> pure hascontent)
fully support core.symlinks=false in all relevant symlink handling code Refactored annex link code into nice clean new library. Audited and dealt with calls to createSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ createSymbolicLink linktarget file only when core.symlinks=true Assistant/WebApp/Configurators/Local.hs: createSymbolicLink link link test if symlinks can be made Command/Fix.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/FromKey.hs: liftIO $ createSymbolicLink link file command only works in indirect mode Command/Indirect.hs: liftIO $ createSymbolicLink l f refuses to run if core.symlinks=false Init.hs: createSymbolicLink f f2 test if symlinks can be made Remote/Directory.hs: go [file] = catchBoolIO $ createSymbolicLink file f >> return True fast key linking; catches failure to make symlink and falls back to copy Remote/Git.hs: liftIO $ catchBoolIO $ createSymbolicLink loc file >> return True ditto Upgrade/V1.hs: liftIO $ createSymbolicLink link f v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to readSymbolicLink. Remaining calls are all safe, because: Annex/Link.hs: ( liftIO $ catchMaybeIO $ readSymbolicLink file only when core.symlinks=true Assistant/Threads/Watcher.hs: ifM ((==) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) code that fixes real symlinks when inotify sees them It's ok to not fix psdueo-symlinks. Assistant/Threads/Watcher.hs: mlink <- liftIO (catchMaybeIO $ readSymbolicLink file) ditto Command/Fix.hs: stopUnless ((/=) (Just link) <$> liftIO (catchMaybeIO $ readSymbolicLink file)) $ do command only works in indirect mode Upgrade/V1.hs: getsymlink = takeFileName <$> readSymbolicLink file v1 repos could not be on a filesystem w/o symlinks Audited and dealt with calls to isSymbolicLink. (Typically used with getSymbolicLinkStatus, but that is just used because getFileStatus is not as robust; it also works on pseudolinks.) Remaining calls are all safe, because: Assistant/Threads/SanityChecker.hs: | isSymbolicLink s -> addsymlink file ms only handles staging of symlinks that were somehow not staged (might need to be updated to support pseudolinks, but this is only a belt-and-suspenders check anyway, and I've never seen the code run) Command/Add.hs: if isSymbolicLink s || not (isRegularFile s) avoids adding symlinks to the annex, so not relevant Command/Indirect.hs: | isSymbolicLink s -> void $ flip whenAnnexed f $ only allowed on systems that support symlinks Command/Indirect.hs: whenM (liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f) $ do ditto Seek.hs:notSymlink f = liftIO $ not . isSymbolicLink <$> getSymbolicLinkStatus f used to find unlocked files, only relevant in indirect mode Utility/FSEvents.hs: | Files.isSymbolicLink s = runhook addSymlinkHook $ Just s Utility/FSEvents.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: | Files.isSymbolicLink s -> Utility/INotify.hs: checkfiletype Files.isSymbolicLink addSymlinkHook f Utility/Kqueue.hs: | Files.isSymbolicLink s = callhook addSymlinkHook (Just s) change all above are lower-level, not relevant Audited and dealt with calls to isSymLink. Remaining calls are all safe, because: Annex/Direct.hs: | isSymLink (getmode item) = This is looking at git diff-tree objects, not files on disk Command/Unused.hs: | isSymLink (LsTree.mode l) = do This is looking at git ls-tree, not file on disk Utility/FileMode.hs:isSymLink :: FileMode -> Bool Utility/FileMode.hs:isSymLink = checkMode symbolicLinkMode low-level Done!!
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( stageSymlink file =<< hashSymlink =<< calcGitLink file key
, ifM (coreSymlinks <$> Annex.getGitConfig)
( do
_ <- link file key hascontent
params <- ifM (Annex.getState Annex.force)
( return [Param "-f"]
, return []
)
Annex.Queue.addCommand "add" (params++[Param "--"]) [file]
, do
l <- link file key hascontent
addAnnexLink l file
)
)
return True