Commit graph

201 commits

Author SHA1 Message Date
Dan Stillman
73f4d28ab2 ZFS file sync overhaul for API syncing
This mostly gets ZFS file syncing and file conflict resolution working
with the API sync process. WebDAV will need to be updated separately.

Known issues:

- File sync progress is temporarily gone
- File uploads can result in an unnecessary 412 loop on the next data
  sync
- This causes Firefox to crash on one of my computers during tests,
  which would be easier to debug if it produced a crash log.

Also:

- Adds httpd.js for use in tests when FakeXMLHttpRequest can't be used
  (e.g., saveURI()).
- Adds some additional test data files for attachment tests
2015-10-29 04:38:27 -04:00
Aurimas Vinckevicius
88ab129ffb Add Feed and FeedItem
Also:
* _finalizeErase in Zotero.DataObject is now inheritable
* Call _initErase before starting a DB transaction
* removes Zotero.Libraries.add and Zotero.Libraries.remove (doesn't seem like this is used any more)
2015-09-21 17:08:21 -05:00
Dan Stillman
984789d304 API syncing megacommit
There's a lot more to do, and this isn't ready for actual usage, but the
basic functionality is mostly in place and has decent test coverage. It
can successfully upgrade a library last used with classic syncing and
pull down changes via the API. Uploading mostly works but is currently
disabled for safety until it has better test coverage.

Downloaded JSON is first saved to a cache table, which is then used to
populate other tables and later for generating PATCH requests and
automatically resolving conflicts (since it shows what was changed
locally and what was changed remotely). Objects with unmet dependencies
or unknown fields are skipped for now but don't block the rest of the
sync.

Some of the bigger remaining to-dos:

- Tests for uploading
- Re-do the preferences to get an API key
- File sync integration
- Full-text syncing integration
- Manual conflict resolution (though this already includes much smarter
  conflict handling that automatically resolves many conflicts)
2015-07-20 18:16:57 -04:00
Dan Stillman
02cd71ebb5 Allow overriding startup options in Zotero.reinit()
And use it in resetDB() test support function, mainly to allow
skipBundledFiles for resetDB calls. Translator installation and
initialization can take a long time, but tests that need a clean DB
don't necessarily rely on translators. Without this, running resetDB()
in beforeEach() for many tests is prohibitively slow.
2015-07-20 02:12:14 -04:00
Dan Stillman
5c523d8694 Merge branch '4.0' 2015-07-18 07:09:53 -04:00
Aurimas Vinckevicius
bf58de7e62 Update citeproc-js to 1.1.25
And split off Zotero additions
2015-07-09 16:31:57 -05:00
Dan Stillman
99dd1c0697 Merge branch '4.0'
Since modal windows (e.g., the Create Bib window and the Quick Copy site
editor window) can't use yield, style retrieval
(Zotero.Styles.getVisible()/getAll()) is now synchronous, depending on a
previous async Zotero.Styles.init(). The translator list is generated in
the prefs window and passed into the Quick Copy site editor, but it's
possible the translators API should be changed to make getTranslators()
synchronous with a prior init() as well.
2015-06-27 16:59:58 -04:00
Dan Stillman
33dedd1753 Tags overhaul [DB reupgrade]
- Simplified schema
- Tags are now added without reloading entire tag selector
  - On my system, adding 400 tags to an item (separately, with the tag
    selector updating each time) went from 59 seconds to 42. (Given that
    it takes only 13 seconds with the tag selector closed, though,
    there's clearly more work to be done.)
- Tag selector now uses HTML flexbox (in identical fashion, for now, but
  with the possibility of fancier changes later, and with streamlined
  logic thanks to the flexbox 'order' property)
- Various async fixes
- Tests
2015-06-23 05:21:58 -04:00
Dan Stillman
dcd7de03b0 Match last name alone for two-field names in search autocomplete
https://forums.zotero.org/discussion/50073/
2015-06-18 00:21:50 -04:00
Dan Stillman
ff7919553c Collections data layer cleanup
Get rid of data_access.js, at long last. Existing calls to
Zotero.getCollections() will need to be replaced with
Zotero.Collections.getByLibrary() or .getByParent().

Also removes Zotero.Collection::getCollections(), which is redundant
with Zotero.Collections.getByLibrary(), and Zotero.Collections.add().
The latter didn't didn't include a libraryID anyway, so code might as
well just use 'new Zotero.Collection' instead.
2015-05-24 04:37:34 -04:00
Dan Stillman
ef57b4e016 Relations fixes and cleanup
Relations need a complete overhaul, but this makes them generally work
again.
2015-05-24 03:08:22 -04:00
Dan Stillman
32abbe7c25 Load groups at startup, and make Zotero.Groups functions synchronous
Groups were already being loaded for the collections list, so we might
as well just store them initially and let Zotero.Libraries.getName() be
a synchronous call.
2015-05-22 04:52:05 -04:00
Dan Stillman
51c7ae6e5c Add -b option to skip translator/style installation in tests
'b' for *b*undled files

Translators and styles take a long time to install and initialize in
source installations, and they're unnecessary for many tests.

This shaves about 10 seconds off each test run for me on one system (and
that's with some help from filesystem caching).
2015-04-16 20:50:15 -04:00
Dan Stillman
293f7c6dd4 Zotero.Search.prototype.addCondition() doesn't need to be async 2015-04-16 20:48:59 -04:00
Dan Stillman
fec43f1f62 Merge branch '4.0' into api_syncing 2015-04-13 02:01:43 -04:00
Aurimas Vinckevicius
164f4e4321 More informative error messages for failed file loads 2015-04-10 19:46:57 -05:00
Aurimas Vinckevicius
f6510419cb Skip test for "recognizePDF without DOI" on Travis-CI
Breaks due to CAPTCHA when tests are run frequently
2015-04-06 23:17:41 -05:00
Dan Stillman
827eb9b32e Change command-line debug flag to -ZoteroDebug for consistency
From -zoterodebug
2015-03-24 03:38:11 -04:00
Dan Stillman
828f3f5024 Fix report generation 2015-03-17 00:05:08 -04:00
Dan Stillman
bdd69d0a53 Merge branch '4.0' into api_syncing 2015-03-16 23:41:10 -04:00
Dan Stillman
1c8abf3841 Change user library from 0 to 1
0 allowed for some accidental behavior due to old code expecting NULL,
and it prevented easy checks (``if (!libraryID)``) for a passed
libraryID. Code now uses Zotero.Libraries.userLibraryID instead of a
hard-coded value (except in schema.js). Functions can still make
libraryID optional, but they should then use
Zotero.Libraries.userLibraryID if that's to mean the user library.

There might be some code that still expects 0 that I missed.
2015-03-16 12:16:05 -04:00
Simon Kornblith
c7c58f8343 Add support function to reset the DB and a test that it works. 2015-03-09 14:25:49 -04:00
Dan Stillman
94b2865149 Fix sorting of tag autocomplete in advanced search 2015-02-25 23:58:54 -05:00
Aurimas Vinckevicius
68e7849fcf Add Zotero.Utilities.Internal.hyphenateISBN
Hyphenates ISBN-10 or ISBN-13 according to data from https://www.isbn-international.org
2015-02-24 22:42:29 -06:00
Dan Stillman
b478d8f204 Fix some errors if pane is opened during initialization 2015-02-24 22:07:30 -05:00
Dan Stillman
e2d3cc3f0d Update zotero://select to use new URLs and wait for items list load
Closes #541
2014-09-23 01:13:38 -04:00
Dan Stillman
755ead2119 Update zotero:// extensions (report, timeline, etc.) for async DB, and more
- Protocol handler extensions can now handle promises and can also make
  data available as it's ready instead of all at once (e.g., reports now
  output one entry at a time)
- zotero:// URL syntaxes are now more consistent and closer to the web
  API (old URLs should work, but some may currently be broken)

Also:

- Code to generate server API, currently available for testing via
  zotero://data URLs but eventually moving to HTTP -- zotero://data URLs match
  web API URLs, with a different prefix for the personal library (/library vs.
  /users/12345)
- Miscellaneous fixes to data objects

Under the hood:

- Extensions now return an AsyncChannel, which is an nsIChannel implementation
  that takes a promise-yielding generator that returns a string,
  nsIAsyncInputStream, or file that will be used for the channel's data
- New function Zotero.Utilities.Internal.getAsyncInputStream() takes a
  generator that yields either promises or strings and returns an async input
  stream filled with the yielded strings
- Zotero.Router parsers URLs and extract parameters
- Zotero.Item.toResponseJSON()
2014-09-09 00:36:29 -04:00
Dan Stillman
c5ee3651fe Don't try to load uncommitted files 2014-09-09 00:35:35 -04:00
Dan Stillman
89833e2da7 Use 'Zotero' object instead of this._zotero in autocomplete 2014-08-10 14:54:41 -04:00
Dan Stillman
00484c5e69 Closes #527, Asyncify autocomplete 2014-08-10 14:52:03 -04:00
Dan Stillman
f5896dbb8d Remove synchronous database methods
This required doing additional caching at startup (e.g., item types and fields)
so that various methods can remain synchronous.

This lets us switch back to using the current Sqlite.jsm. Previously we were
bundling the Fx24 version, which avoided freezes with locking_mode=EXCLUSIVE
with both sync and async queries.

Known broken things:

  - Autocomplete
  - Database backup
  - UDFs (e.g., REGEXP function used in Zotero.DB.getNextName())
2014-08-09 18:10:32 -04:00
Dan Stillman
db0fa3c33e Async DB megacommit
Promise-based rewrite of most of the codebase, with asynchronous database and file access -- see https://github.com/zotero/zotero/issues/518 for details.

WARNING: This includes backwards-incompatible schema changes.

An incomplete list of other changes:

- Schema overhaul
  - Replace main tables with new versions with updated schema
  - Enable real foreign key support and remove previous triggers
  - Don't use NULLs for local libraryID, which broke the UNIQUE index
    preventing object key duplication. All code (Zotero and third-party)
    using NULL for the local library will need to be updated to use 0
    instead (already done for Zotero code)
  - Add 'compatibility' DB version that can be incremented manually to break DB
    compatibility with previous versions. 'userdata' upgrades will no longer
    automatically break compatibility.
  - Demote creators and tags from first-class objects to item properties
- New API syncing properties
  - 'synced'/'version' properties to data objects
  - 'etag' to groups
  - 'version' to libraries
- Create Zotero.DataObject that other objects inherit from
- Consolidate data object loading into Zotero.DataObjects
- Change object reloading so that only the loaded and changed parts of objects are reloaded, instead of reloading all data from the database (with some exceptions, including item primary data)
- Items and collections now have .parentItem and .parentKey properties, replacing item.getSource() and item.getSourceKey()
- New function Zotero.serial(fn), to wrap an async function such that all calls are run serially
- New function Zotero.Utilities.Internal.forEachChunkAsync(arr, chunkSize, func)
- Add tag selector loading message
- Various API and name changes, since everything was breaking anyway

Known broken things:

- Syncing (will be completely rewritten for API syncing)
- Translation architecture (needs promise-based rewrite)
- Duplicates view
- DB integrity check (from schema changes)
- Dragging (may be difficult to fix)

Lots of other big and little things are certainly broken, particularly with the UI, which can be affected by async code in all sorts of subtle ways.
2014-08-06 22:59:37 -04:00
Dan Stillman
4ea5e2d426 Update code to use 0 instead of NULL for libraryID 2014-08-06 22:14:59 -04:00
Dan Stillman
156f4eb160 Allow items to be moved (not copied) between collections w/modifier key
Cmd on OS X, Shift on Windows/Linux

How do I not get to close a ticket for this?

Unfortunately on Windows it doesn't seem possible to set the cursor
effect to arbitrary states (see note in libraryTreeView.js::
_setDropEffect() for the gory details), so this just uses the default
cursor there. On OS X and Linux the cursor reflects the requested
action.
2014-05-03 11:52:38 -04:00
Dan Stillman
60e5ab8124 Merge branch '4.0'
Conflicts:
	chrome/content/zotero/xpcom/db.js
	chrome/content/zotero/xpcom/fulltext.js
	chrome/content/zotero/xpcom/zotero.js
	chrome/content/zotero/zoteroPane.js
	components/zotero-service.js
	install.rdf
	update.rdf
2014-04-08 18:47:32 -04:00
Simon Kornblith
1ee015317f Don't restart in connector mode on Zotero.init() failure
I broke this in a723c85999
2013-12-11 14:50:48 -05:00
Dan Stillman
6ff0ea6d18 Add -zoterodebug command-line flag to force debug output
This should make it much easier to debug startup errors, particularly in
Standalone.

This also adds a general mechanism to set Zotero initialization options via
command-line flags.
2013-11-30 01:55:48 -05:00
Dan Stillman
5d32fb90ea Merge branch '4.0'
Conflicts:
	chrome/content/zotero/fileInterface.js
	chrome/content/zotero/overlay.js
	chrome/content/zotero/xpcom/schema.js
	chrome/content/zotero/xpcom/zotero.js
	chrome/content/zotero/zoteroPane.js
	install.rdf
	update.rdf
2013-11-24 16:08:46 -05:00
Simon Kornblith
0b92ad0037 Modify behavior on Zotero Standalone launch to account for failure
- Close Zotero pane before database is closed prior to reload, instead
  of waiting until reload is complete
- Show an error message if Zotero Standalone is not accessible when it
  should be
2013-11-05 15:52:40 -05:00
Dan Stillman
d318bca7a4 Allow items to be moved (not copied) between collections w/modifier key
Cmd on OS X, Shift on Windows/Linux

How do I not get to close a ticket for this?

Unfortunately on Windows it doesn't seem possible to set the cursor
effect to arbitrary states (see note in libraryTreeView.js::
_setDropEffect() for the gory details), so this just uses the default
cursor there. On OS X and Linux the cursor reflects the requested
action.
2013-09-06 15:30:37 -04:00
Simon Kornblith
526441c3ca Make translator loading asynchronous
Other changes:
- Factored out Zotero.Translators from Zotero.Translator. The latter
  should be usable in the bookmarklet and connectors without changes.
- configOptions, displayOptions, and hiddenPrefs no longer copy on
  read. I don't think this actually affects any existing code.
- Zotero.Translate._loadTranslator() now returns a promise
2013-08-17 03:15:43 -04:00
Dan Stillman
5787b230f7 Use asynchronous DB and file access for schema checks/updates
This change should improve Firefox startup time. If the Zotero pane is
opened before Zotero has initialized, the pane will be blocked with a
progress bar until it's done. Standalone currently does the same, but it
should be changed to just delay opening the window if possible.

The upgrade wizard has been disabled for schema upgrades, in the hope
that upgrades can be done in a way that won't break compatibility with
earlier versions (or that can at least be done in a way such that we can
put out point releases of the last major version that provide
compatibility during beta/post-upgrade periods).

This patch likely breaks many things, and definitely breaks connector
mode.

This change also removes upgrade steps for databases from Zotero 2.1b2
and earlier. Users with such databases will need to upgrade via Zotero
4.0.x first or delete their data directories and start anew. This should
only affect users who haven't opened Zotero since Nov. 2010.
2013-08-11 21:53:41 -04:00
Simon Kornblith
a723c85999 Return a promise from Zotero.shutdown() 2013-08-09 11:11:01 -04:00
Simon Kornblith
2069b5b396 Fix switching in and out of connector mode
Broken by 9d3f55be51
2013-08-09 10:55:56 -04:00
Dan Stillman
7572eebcd1 Offer autocomplete of same creator for different creator types
If a creator exists on an item but is a different creator type than the
one being entered, show creator in autocomplete list.
2013-08-07 15:25:15 -04:00
Dan Stillman
9d3f55be51 Use async DB for autocomplete
This was probably hanging previously because I was passing a JS function for
onProgress, which apparently isn't allowed.
2013-08-07 11:01:12 -04:00
Dan Stillman
10e9c5e0b7 Restore ZFS quota warning
Possible that this hasn't shown since 4.0?
2013-07-08 20:13:47 -04:00
Dan Stillman
65c7a5988b Limit autocomplete for tags and fields to current library
Not done for advanced search

Should be easy for saved search, but not yet done
2013-04-19 15:10:05 -04:00
Simon Kornblith
946c754ae7 Remove redundant line 2013-03-18 20:33:09 -04:00
Dan Stillman
d2f028d797 Tag colors, synced settings, and (stopgap) silent DB upgrades
- New tag colors support, with the ability to assign colors to up to 6
  tags per library. Tags with colors assigned will show up at the top of
  the tag selector and can be added to (and removed from) selected items
  by pressing the 1-6 keys on the keyboard. The tags will show up as
  color swatches before an item's title in the items list.
- Synced settings, with Notifier triggers when they change and
  accessible via the API (currently restricted on the server to
  'tagColors', but available for other things upon request)
- Silent DB upgrades for backwards-compatible changes. We'll do
  something fancier with async DB queries in 4.0, but this will work for
  changes that can be made without breaking compatibility with older
  clients, like the creation of new tables. The 'userdata' value is
  capped at 76, while further increments go to 'userdata2'.

TODO:

- Try to avoid jitter when redrawing swatches
- Optimize tag color images for retina displays
- Redo attachment dots in flat style?
- Clear all colors from an item with 0 (as in Thunderbird), but I don't
  think we can do this without undo
2013-03-03 06:23:25 -05:00