git-annex/Command/Export.hs
Joey Hess 4c9ad1de46
optimisation: stream keys through git cat-file --buffer
This is only implemented for git-annex get so far. It makes git-annex
get nearly twice as fast in a repo with 10k files, all of them present!

But, see the TODO for some caveats.
2020-07-10 13:54:52 -04:00

492 lines
17 KiB
Haskell

{- git-annex command
-
- Copyright 2017-2019 Joey Hess <id@joeyh.name>
-
- Licensed under the GNU AGPL version 3 or higher.
-}
{-# LANGUAGE TupleSections, BangPatterns #-}
{-# LANGUAGE OverloadedStrings #-}
module Command.Export where
import Command
import qualified Annex
import qualified Git
import qualified Git.DiffTree
import qualified Git.LsTree
import qualified Git.Tree
import qualified Git.Ref
import Git.Types
import Git.FilePath
import Git.Sha
import qualified Remote
import Types.Remote
import Types.Export
import Annex.Export
import Annex.Content
import Annex.Transfer
import Annex.CatFile
import Annex.FileMatcher
import Annex.RemoteTrackingBranch
import Logs.Location
import Logs.Export
import Logs.PreferredContent
import Database.Export
import Config
import Utility.Tmp
import Utility.Metered
import Utility.Matcher
import qualified Data.ByteString.Char8 as S8
import qualified Data.ByteString.Lazy as L
import qualified Data.Map as M
import Control.Concurrent
cmd :: Command
cmd = withGlobalOptions [jobsOption, jsonOptions, jsonProgressOption] $
command "export" SectionCommon
"export content to a remote"
paramTreeish (seek <$$> optParser)
data ExportOptions = ExportOptions
{ exportTreeish :: Git.Ref
-- ^ can be a tree, a branch, a commit, or a tag
, exportRemote :: DeferredParse Remote
, exportTracking :: Bool
}
optParser :: CmdParamsDesc -> Parser ExportOptions
optParser _ = ExportOptions
<$> (Git.Ref <$> parsetreeish)
<*> (parseRemoteOption <$> parseToOption)
<*> parsetracking
where
parsetreeish = argument str
( metavar paramTreeish
)
parsetracking = switch
( long "tracking"
<> help ("track changes to the " ++ paramTreeish ++ " (deprecated)")
)
-- To handle renames which swap files, the exported file is first renamed
-- to a stable temporary name based on the key.
exportTempName :: ExportKey -> ExportLocation
exportTempName ek = mkExportLocation $ toRawFilePath $
".git-annex-tmp-content-" ++ serializeKey (asKey (ek))
seek :: ExportOptions -> CommandSeek
seek o = startConcurrency commandStages $ do
r <- getParsed (exportRemote o)
unlessM (isExportSupported r) $
giveup "That remote does not support exports."
-- handle deprecated option
when (exportTracking o) $
setConfig (remoteAnnexConfig r "tracking-branch")
(fromRef $ exportTreeish o)
tree <- filterPreferredContent r =<<
fromMaybe (giveup "unknown tree") <$>
inRepo (Git.Ref.tree (exportTreeish o))
mtbcommitsha <- getExportCommit r (exportTreeish o)
db <- openDb (uuid r)
writeLockDbWhile db $ do
changeExport r db tree
unlessM (Annex.getState Annex.fast) $ do
void $ fillExport r db tree mtbcommitsha
closeDb db
-- | When the treeish is a branch like master or refs/heads/master
-- (but not refs/remotes/...), find the commit it points to
-- and the corresponding remote tracking branch.
--
-- The treeish may also be a subdir within a branch, like master:subdir,
-- that results in this returning the same thing it does for the master
-- branch.
getExportCommit :: Remote -> Git.Ref -> Annex (Maybe (RemoteTrackingBranch, Sha))
getExportCommit r treeish
| '/' `notElem` fromRef baseref = do
let tb = mkRemoteTrackingBranch r baseref
commitsha <- inRepo $ Git.Ref.sha $ Git.Ref.underBase refsheads baseref
return (fmap (tb, ) commitsha)
| otherwise = return Nothing
where
baseref = Ref $ S8.takeWhile (/= ':') $ fromRef' $
Git.Ref.removeBase refsheads treeish
refsheads = "refs/heads"
-- | Changes what's exported to the remote. Does not upload any new
-- files, but does delete and rename files already exported to the remote.
changeExport :: Remote -> ExportHandle -> PreferredFiltered Git.Ref -> CommandSeek
changeExport r db (PreferredFiltered new) = do
old <- getExport (uuid r)
recordExportBeginning (uuid r) new
-- Clean up after incomplete export of a tree, in which
-- the next block of code below may have renamed some files to
-- temp files. Diff from the incomplete tree to the new tree,
-- and delete any temp files that the new tree can't use.
let recover diff = commandAction $
startRecoverIncomplete r db
(Git.DiffTree.srcsha diff)
(Git.DiffTree.file diff)
forM_ (incompleteExportedTreeishes old) $ \incomplete ->
mapdiff recover incomplete new
waitForAllRunningCommandActions
-- Diff the old and new trees, and delete or rename to new name all
-- changed files in the export. After this, every file that remains
-- in the export will have the content from the new treeish.
--
-- When there was an export conflict, this resolves it.
--
-- The ExportTree is also updated here to reflect the new tree.
case exportedTreeishes old of
[] -> updateExportTree db emptyTree new
[oldtreesha] -> do
diffmap <- mkDiffMap oldtreesha new db
let seekdiffmap a = commandActions $
map a (M.toList diffmap)
-- Rename old files to temp, or delete.
seekdiffmap $ \(ek, (moldf, mnewf)) -> do
case (moldf, mnewf) of
(Just oldf, Just _newf) ->
startMoveToTempName r db oldf ek
(Just oldf, Nothing) ->
startUnexport' r db oldf ek
_ -> stop
waitForAllRunningCommandActions
-- Rename from temp to new files.
seekdiffmap $ \(ek, (moldf, mnewf)) ->
case (moldf, mnewf) of
(Just _oldf, Just newf) ->
startMoveFromTempName r db ek newf
_ -> stop
waitForAllRunningCommandActions
ts -> do
warning "Resolving export conflict.."
forM_ ts $ \oldtreesha -> do
-- Unexport both the srcsha and the dstsha,
-- because the wrong content may have
-- been renamed to the dstsha due to the
-- export conflict.
let unexportboth d =
[ Git.DiffTree.srcsha d
, Git.DiffTree.dstsha d
]
-- Don't rename to temp, because the
-- content is unknown; delete instead.
mapdiff
(\diff -> commandAction $ startUnexport r db (Git.DiffTree.file diff) (unexportboth diff))
oldtreesha new
updateExportTree db emptyTree new
waitForAllRunningCommandActions
liftIO $ recordExportTreeCurrent db new
-- Waiting until now to record the export guarantees that,
-- if this export is interrupted, there are no files left over
-- from a previous export, that are not part of this export.
c <- Annex.getState Annex.errcounter
when (c == 0) $ do
recordExport (uuid r) $ ExportChange
{ oldTreeish = exportedTreeishes old
, newTreeish = new
}
where
mapdiff a oldtreesha newtreesha = do
(diff, cleanup) <- inRepo $
Git.DiffTree.diffTreeRecursive oldtreesha newtreesha
sequence_ $ map a diff
void $ liftIO cleanup
-- Map of old and new filenames for each changed ExportKey in a diff.
type DiffMap = M.Map ExportKey (Maybe TopFilePath, Maybe TopFilePath)
mkDiffMap :: Git.Ref -> Git.Ref -> ExportHandle -> Annex DiffMap
mkDiffMap old new db = do
(diff, cleanup) <- inRepo $ Git.DiffTree.diffTreeRecursive old new
diffmap <- M.fromListWith combinedm . concat <$> forM diff mkdm
void $ liftIO cleanup
return diffmap
where
combinedm (srca, dsta) (srcb, dstb) = (srca <|> srcb, dsta <|> dstb)
mkdm i = do
srcek <- getek (Git.DiffTree.srcsha i)
dstek <- getek (Git.DiffTree.dstsha i)
updateExportTree' db srcek dstek i
return $ catMaybes
[ (, (Just (Git.DiffTree.file i), Nothing)) <$> srcek
, (, (Nothing, Just (Git.DiffTree.file i))) <$> dstek
]
getek sha
| sha `elem` nullShas = return Nothing
| otherwise = Just <$> exportKey sha
newtype FileUploaded = FileUploaded { fromFileUploaded :: Bool }
newtype AllFilled = AllFilled { fromAllFilled :: Bool }
-- | Upload all exported files that are not yet in the remote.
--
-- Returns True when some files were uploaded (perhaps not all of them).
--
-- Once all exported files have reached the remote, updates the
-- remote tracking branch.
fillExport :: Remote -> ExportHandle -> PreferredFiltered Git.Ref -> Maybe (RemoteTrackingBranch, Sha) -> Annex Bool
fillExport r db (PreferredFiltered newtree) mtbcommitsha = do
(l, cleanup) <- inRepo $ Git.LsTree.lsTree Git.LsTree.LsTreeRecursive newtree
cvar <- liftIO $ newMVar (FileUploaded False)
allfilledvar <- liftIO $ newMVar (AllFilled True)
commandActions $ map (startExport r db cvar allfilledvar) l
void $ liftIO $ cleanup
waitForAllRunningCommandActions
case mtbcommitsha of
Nothing -> noop
Just (tb, commitsha) ->
whenM (liftIO $ fromAllFilled <$> takeMVar allfilledvar) $
makeRemoteTrackingBranchMergeCommit tb commitsha
>>= setRemoteTrackingBranch tb
liftIO $ fromFileUploaded <$> takeMVar cvar
startExport :: Remote -> ExportHandle -> MVar FileUploaded -> MVar AllFilled -> Git.LsTree.TreeItem -> CommandStart
startExport r db cvar allfilledvar ti = do
ek <- exportKey (Git.LsTree.sha ti)
stopUnless (notrecordedpresent ek) $
starting ("export " ++ name r) (ActionItemOther (Just (fromRawFilePath f))) $
ifM (either (const False) id <$> tryNonAsync (checkPresentExport (exportActions r) (asKey ek) loc))
( next $ cleanupExport r db ek loc False
, do
liftIO $ modifyMVar_ cvar (pure . const (FileUploaded True))
performExport r db ek af (Git.LsTree.sha ti) loc allfilledvar
)
where
loc = mkExportLocation f
f = getTopFilePath (Git.LsTree.file ti)
af = AssociatedFile (Just f)
notrecordedpresent ek = (||)
<$> liftIO (notElem loc <$> getExportedLocation db (asKey ek))
-- If content was removed from the remote, the export db
-- will still list it, so also check location tracking.
<*> (notElem (uuid r) <$> loggedLocations (asKey ek))
performExport :: Remote -> ExportHandle -> ExportKey -> AssociatedFile -> Sha -> ExportLocation -> MVar AllFilled -> CommandPerform
performExport r db ek af contentsha loc allfilledvar = do
let storer = storeExport (exportActions r)
sent <- tryNonAsync $ case ek of
AnnexKey k -> ifM (inAnnex k)
( notifyTransfer Upload af $
-- Using noRetry here because interrupted
-- exports cannot be resumed.
upload (uuid r) k af noRetry $ \pm -> do
let rollback = void $
performUnexport r db [ek] loc
sendAnnex k rollback $ \f ->
Remote.action $
storer f k loc pm
, do
showNote "not available"
return False
)
-- Sending a non-annexed file.
GitKey sha1k ->
withTmpFile "export" $ \tmp h -> do
b <- catObject contentsha
liftIO $ L.hPut h b
liftIO $ hClose h
Remote.action $
storer tmp sha1k loc nullMeterUpdate
let failedsend = liftIO $ modifyMVar_ allfilledvar (pure . const (AllFilled False))
case sent of
Right True -> next $ cleanupExport r db ek loc True
Right False -> do
failedsend
stop
Left err -> do
failedsend
throwM err
cleanupExport :: Remote -> ExportHandle -> ExportKey -> ExportLocation -> Bool -> CommandCleanup
cleanupExport r db ek loc sent = do
liftIO $ addExportedLocation db (asKey ek) loc
when sent $
logChange (asKey ek) (uuid r) InfoPresent
return True
startUnexport :: Remote -> ExportHandle -> TopFilePath -> [Git.Sha] -> CommandStart
startUnexport r db f shas = do
eks <- forM (filter (`notElem` nullShas) shas) exportKey
if null eks
then stop
else starting ("unexport " ++ name r) (ActionItemOther (Just (fromRawFilePath f'))) $
performUnexport r db eks loc
where
loc = mkExportLocation f'
f' = getTopFilePath f
startUnexport' :: Remote -> ExportHandle -> TopFilePath -> ExportKey -> CommandStart
startUnexport' r db f ek = starting ("unexport " ++ name r) (ActionItemOther (Just (fromRawFilePath f'))) $
performUnexport r db [ek] loc
where
loc = mkExportLocation f'
f' = getTopFilePath f
-- Unlike a usual drop from a repository, this does not check that
-- numcopies is satisfied before removing the content. Typically an export
-- remote is untrusted, so would not count as a copy anyway.
-- Or, an export may be appendonly, and removing a file from it does
-- not really remove the content, which must be accessible later on.
performUnexport :: Remote -> ExportHandle -> [ExportKey] -> ExportLocation -> CommandPerform
performUnexport r db eks loc = do
ifM (allM rm eks)
( next $ cleanupUnexport r db eks loc
, stop
)
where
rm ek = Remote.action $ removeExport (exportActions r) (asKey ek) loc
cleanupUnexport :: Remote -> ExportHandle -> [ExportKey] -> ExportLocation -> CommandCleanup
cleanupUnexport r db eks loc = do
liftIO $ do
forM_ eks $ \ek ->
removeExportedLocation db (asKey ek) loc
flushDbQueue db
-- An appendonly remote can support removeExportLocation to remove
-- the file from the exported tree, but still retain the content
-- and allow retrieving it.
unless (appendonly r) $ do
remaininglocs <- liftIO $
concat <$> forM eks (\ek -> getExportedLocation db (asKey ek))
when (null remaininglocs) $
forM_ eks $ \ek ->
logChange (asKey ek) (uuid r) InfoMissing
removeEmptyDirectories r db loc (map asKey eks)
startRecoverIncomplete :: Remote -> ExportHandle -> Git.Sha -> TopFilePath -> CommandStart
startRecoverIncomplete r db sha oldf
| sha `elem` nullShas = stop
| otherwise = do
ek <- exportKey sha
let loc = exportTempName ek
starting ("unexport " ++ name r) (ActionItemOther (Just (fromRawFilePath (fromExportLocation loc)))) $ do
liftIO $ removeExportedLocation db (asKey ek) oldloc
performUnexport r db [ek] loc
where
oldloc = mkExportLocation $ getTopFilePath oldf
startMoveToTempName :: Remote -> ExportHandle -> TopFilePath -> ExportKey -> CommandStart
startMoveToTempName r db f ek = starting ("rename " ++ name r)
(ActionItemOther $ Just $ fromRawFilePath f' ++ " -> " ++ fromRawFilePath (fromExportLocation tmploc))
(performRename r db ek loc tmploc)
where
loc = mkExportLocation f'
f' = getTopFilePath f
tmploc = exportTempName ek
startMoveFromTempName :: Remote -> ExportHandle -> ExportKey -> TopFilePath -> CommandStart
startMoveFromTempName r db ek f = do
let tmploc = exportTempName ek
stopUnless (liftIO $ elem tmploc <$> getExportedLocation db (asKey ek)) $
starting ("rename " ++ name r) (ActionItemOther (Just (fromRawFilePath (fromExportLocation tmploc) ++ " -> " ++ fromRawFilePath f'))) $
performRename r db ek tmploc loc
where
loc = mkExportLocation f'
f' = getTopFilePath f
performRename :: Remote -> ExportHandle -> ExportKey -> ExportLocation -> ExportLocation -> CommandPerform
performRename r db ek src dest =
tryNonAsync (renameExport (exportActions r) (asKey ek) src dest) >>= \case
Right (Just ()) -> next $ cleanupRename r db ek src dest
Left err -> do
warning $ "rename failed (" ++ show err ++ "); deleting instead"
fallbackdelete
-- remote does not support renaming
Right Nothing -> fallbackdelete
where
fallbackdelete = performUnexport r db [ek] src
cleanupRename :: Remote -> ExportHandle -> ExportKey -> ExportLocation -> ExportLocation -> CommandCleanup
cleanupRename r db ek src dest = do
liftIO $ do
removeExportedLocation db (asKey ek) src
addExportedLocation db (asKey ek) dest
flushDbQueue db
if exportDirectories src /= exportDirectories dest
then removeEmptyDirectories r db src [asKey ek]
else return True
-- | Remove empty directories from the export. Call after removing an
-- exported file, and after calling removeExportLocation and flushing the
-- database.
removeEmptyDirectories :: Remote -> ExportHandle -> ExportLocation -> [Key] -> Annex Bool
removeEmptyDirectories r db loc ks
| null (exportDirectories loc) = return True
| otherwise = case removeExportDirectory (exportActions r) of
Nothing -> return True
Just removeexportdirectory -> do
ok <- allM (go removeexportdirectory)
(reverse (exportDirectories loc))
unless ok $ liftIO $ do
-- Add location back to export database,
-- so this is tried again next time.
forM_ ks $ \k ->
addExportedLocation db k loc
flushDbQueue db
return ok
where
go removeexportdirectory d =
ifM (liftIO $ isExportDirectoryEmpty db d)
( Remote.action $ removeexportdirectory d
, return True
)
-- | A value that has been filtered through the remote's preferred content
-- expression.
newtype PreferredFiltered t = PreferredFiltered t
-- | Filters the tree to files that are preferred content of the remote.
--
-- A log is written with files that were filtered out, so they can be added
-- back in when importing from the remote.
filterPreferredContent :: Remote -> Git.Ref -> Annex (PreferredFiltered Git.Ref)
filterPreferredContent r tree = logExportExcluded (uuid r) $ \logwriter -> do
m <- preferredContentMap
case M.lookup (uuid r) m of
Just matcher | not (isEmpty matcher) -> do
PreferredFiltered <$> go matcher logwriter
_ -> return (PreferredFiltered tree)
where
go matcher logwriter = do
g <- Annex.gitRepo
Git.Tree.adjustTree
(checkmatcher matcher logwriter)
[]
(\_old new -> new)
[]
tree
g
checkmatcher matcher logwriter ti@(Git.Tree.TreeItem topf _ sha) =
catKey sha >>= \case
Just k -> do
-- Match filename relative to the
-- top of the tree.
let af = AssociatedFile $ Just $
getTopFilePath topf
let mi = MatchingKey k af
ifM (checkMatcher' matcher mi mempty)
( return (Just ti)
, do
() <- liftIO $ logwriter ti
return Nothing
)
-- Always export non-annexed files.
Nothing -> return (Just ti)