90 lines
4.2 KiB
Markdown
90 lines
4.2 KiB
Markdown
### Please describe the problem.
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I had thought that, after running git-annex-sync in a repo, running it again should always do nothing (if no remote has changed).
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But I'm seeing an example where I have to run git-annex-sync twice for subsequent runs to do nothing.
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### What steps will reproduce the problem?
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See below. The repo has one submodule, in the directory viral-ngs/ .
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### What version of git-annex are you using? On what operating system?
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[[!format sh """
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(master_env_v150_py36) 16:44 [viral-ngs-benchmarks] $ uname -a
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Linux ip-172-31-80-189.ec2.internal 4.14.133-113.112.amzn2.x86_64 #1 SMP Tue Jul 30 18:29:50 UTC 2019 x86_64 x86_64 x86_64 GNU/Linux
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(master_env_v150_py36) 16:46 [viral-ngs-benchmarks] $ git annex version
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git-annex version: 7.20190730-g1030771
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build flags: Assistant Webapp Pairing S3 WebDAV Inotify DBus DesktopNotify TorrentParser MagicMime Feeds Testsuite
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dependency versions: aws-0.21.1 bloomfilter-2.0.1.0 cryptonite-0.25 DAV-1.3.3 feed-1.0.1.0 ghc-8.6.5 http-client-0.5.14 persistent-sql\
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ite-2.9.3 torrent-10000.1.1 uuid-1.3.13 yesod-1.6.0
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key/value backends: SHA256E SHA256 SHA512E SHA512 SHA224E SHA224 SHA384E SHA384 SHA3_256E SHA3_256 SHA3_512E SHA3_512 SHA3_224E SHA3_2\
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24 SHA3_384E SHA3_384 SKEIN256E SKEIN256 SKEIN512E SKEIN512 BLAKE2B256E BLAKE2B256 BLAKE2B512E BLAKE2B512 BLAKE2B160E BLAKE2B160 BLAKE\
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2B224E BLAKE2B224 BLAKE2B384E BLAKE2B384 BLAKE2BP512E BLAKE2BP512 BLAKE2S256E BLAKE2S256 BLAKE2S160E BLAKE2S160 BLAKE2S224E BLAKE2S224\
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BLAKE2SP256E BLAKE2SP256 BLAKE2SP224E BLAKE2SP224 SHA1E SHA1 MD5E MD5 WORM URL
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remote types: git gcrypt p2p S3 bup directory rsync web bittorrent webdav adb tahoe glacier ddar hook external
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operating system: linux x86_64
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supported repository versions: 5 7
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upgrade supported from repository versions: 0 1 2 3 4 5 6
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local repository version: 5
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"""]]
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### Please provide any additional information below.
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[[!format sh """
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# If you can, paste a complete transcript of the problem occurring here.
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# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log
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(master_env_v150_py36) 16:44 [viral-ngs-benchmarks] $ git annex sync
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On branch is-import-rabies200
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Your branch is up to date with 'origin/is-import-rabies200'.
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It took 5.25 seconds to enumerate untracked files. 'status -uno'
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may speed it up, but you have to be careful not to forget to add
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new files yourself (see 'git help status').
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nothing to commit, working tree clean
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commit ok
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remote: Enumerating objects: 1, done.
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remote: Counting objects: 100% (1/1), done.
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remote: Total 1 (delta 0), reused 1 (delta 0), pack-reused 0
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Unpacking objects: 100% (1/1), done.
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From github.com:broadinstitute/viral-ngs-benchmarks
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1d808d3a08c..de7758ca784 is-import-rabies200 -> origin/is-import-rabies200
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1d808d3a08c..de7758ca784 synced/is-import-rabies200 -> origin/synced/is-import-rabies200
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Updating 1d808d3a08c..de7758ca784
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Fast-forward
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viral-ngs | 2 +-
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1 file changed, 1 insertion(+), 1 deletion(-)
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Already up to date.
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pull origin ok
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(master_env_v150_py36) 16:44 [viral-ngs-benchmarks] $ git annex sync
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[is-import-rabies200 f3e0898cd33] git-annex in viral-ngs-benchmarks copy on /ilya
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1 file changed, 1 insertion(+), 1 deletion(-)
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commit ok
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pull origin ok
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Enumerating objects: 3, done.
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Counting objects: 100% (3/3), done.
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Delta compression using up to 8 threads
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Compressing objects: 100% (2/2), done.
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Writing objects: 100% (2/2), 946 bytes | 946.00 KiB/s, done.
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Total 2 (delta 1), reused 0 (delta 0)
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remote: Resolving deltas: 100% (1/1), completed with 1 local object.
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To github.com:broadinstitute/viral-ngs-benchmarks.git
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63fe6905f53..1d808d3a08c is-import-rabies200 -> synced/is-import-rabies200
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push origin ok
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(master_env_v150_py36) 16:42 [viral-ngs-benchmarks] $ git annex sync
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On branch is-import-rabies200
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Your branch is up to date with 'origin/is-import-rabies200'.
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It took 5.36 seconds to enumerate untracked files. 'status -uno'
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may speed it up, but you have to be careful not to forget to add
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new files yourself (see 'git help status').
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nothing to commit, working tree clean
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commit ok
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pull origin ok
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# End of transcript or log.
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"""]]
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### Have you had any luck using git-annex before? (Sometimes we get tired of reading bug reports all day and a lil' positive end note does wonders)
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