git-annex/Upgrade/V7.hs
Joey Hess e60766543f
add annex.dbdir (WIP)
WIP: This is mostly complete, but there is a problem: createDirectoryUnder
throws an error when annex.dbdir is set to outside the git repo.

annex.dbdir is a workaround for filesystems where sqlite does not work,
due to eg, the filesystem not properly supporting locking.

It's intended to be set before initializing the repository. Changing it
in an existing repository can be done, but would be the same as making a
new repository and moving all the annexed objects into it. While the
databases get recreated from the git-annex branch in that situation, any
information that is in the databases but not stored in the branch gets
lost. It may be that no information ever gets stored in the databases
that cannot be reconstructed from the branch, but I have not verified
that.

Sponsored-by: Dartmouth College's Datalad project
2022-08-11 16:58:53 -04:00

140 lines
5.3 KiB
Haskell

{- git-annex v7 -> v8 upgrade support
-
- Copyright 2019 Joey Hess <id@joeyh.name>
-
- Licensed under the GNU AGPL version 3 or higher.
-}
{-# LANGUAGE OverloadedStrings #-}
{-# LANGUAGE CPP #-}
module Upgrade.V7 where
import qualified Annex
import Annex.Common
import Types.Upgrade
import Annex.CatFile
import qualified Database.Keys
import qualified Database.Keys.SQL
import qualified Git.LsFiles as LsFiles
import qualified Git
import Git.FilePath
import Config
import qualified Utility.RawFilePath as R
import qualified System.FilePath.ByteString as P
upgrade :: Bool -> Annex UpgradeResult
upgrade automatic = do
unless automatic $
showAction "v7 to v8"
-- The fsck databases are not transitioned here; any running
-- incremental fsck can continue to write to the old database.
-- The next time an incremental fsck is started, it will delete the
-- old database, and just re-fsck the files.
-- The old content identifier database is deleted here, but the
-- new database is not populated. It will be automatically
-- populated from the git-annex branch the next time it is used.
removeOldDb . fromRawFilePath =<< fromRepo gitAnnexContentIdentifierDbDirOld
liftIO . removeWhenExistsWith R.removeLink
=<< fromRepo gitAnnexContentIdentifierLockOld
-- The export databases are deleted here. The new databases
-- will be populated by the next thing that needs them, the same
-- way as they would be in a fresh clone.
removeOldDb . fromRawFilePath =<< calcRepo' gitAnnexExportDir
populateKeysDb
removeOldDb . fromRawFilePath =<< fromRepo gitAnnexKeysDbOld
liftIO . removeWhenExistsWith R.removeLink
=<< fromRepo gitAnnexKeysDbIndexCacheOld
liftIO . removeWhenExistsWith R.removeLink
=<< fromRepo gitAnnexKeysDbLockOld
updateSmudgeFilter
return UpgradeSuccess
gitAnnexKeysDbOld :: Git.Repo -> RawFilePath
gitAnnexKeysDbOld r = gitAnnexDir r P.</> "keys"
gitAnnexKeysDbLockOld :: Git.Repo -> RawFilePath
gitAnnexKeysDbLockOld r = gitAnnexKeysDbOld r <> ".lck"
gitAnnexKeysDbIndexCacheOld :: Git.Repo -> RawFilePath
gitAnnexKeysDbIndexCacheOld r = gitAnnexKeysDbOld r <> ".cache"
gitAnnexContentIdentifierDbDirOld :: Git.Repo -> RawFilePath
gitAnnexContentIdentifierDbDirOld r = gitAnnexDir r P.</> "cids"
gitAnnexContentIdentifierLockOld :: Git.Repo -> RawFilePath
gitAnnexContentIdentifierLockOld r = gitAnnexContentIdentifierDbDirOld r <> ".lck"
removeOldDb :: FilePath -> Annex ()
removeOldDb db =
whenM (liftIO $ doesDirectoryExist db) $ do
v <- liftIO $ tryNonAsync $
#if MIN_VERSION_directory(1,2,7)
removePathForcibly db
#else
removeDirectoryRecursive db
#endif
case v of
Left ex -> giveup $ "Failed removing old database directory " ++ db ++ " during upgrade (" ++ show ex ++ ") -- delete that and re-run git-annex to finish the upgrade."
Right () -> return ()
-- Populate the new keys database with associated files and inode caches.
--
-- The information is queried from git. The index contains inode cache
-- information for all staged files, so that is used.
--
-- Note that typically the inode cache of annex objects is also stored in
-- the keys database. This does not add it though, because it's possible
-- that any annex object has gotten modified. The most likely way would be
-- due to annex.thin having been set at some point in the past, bypassing
-- the usual safeguards against object modification. When a worktree file
-- is still a hardlink to an annex object, then they have the same inode
-- cache, so using the inode cache from the git index will get the right
-- thing added in that case. But there are cases where the annex object's
-- inode cache is not added here, most notably when it's not unlocked.
-- The result will be more work needing to be done by isUnmodified and
-- by inAnnex (the latter only when annex.thin is set) to verify the
-- annex object. That work is only done once, and then the object will
-- finally get its inode cached.
populateKeysDb :: Annex ()
populateKeysDb = unlessM isBareRepo $ do
top <- fromRepo Git.repoPath
(l, cleanup) <- inRepo $ LsFiles.inodeCaches [top]
forM_ l $ \case
(_f, Nothing) -> giveup "Unable to parse git ls-files --debug output while upgrading git-annex sqlite databases."
(f, Just ic) -> unlessM (liftIO $ catchBoolIO $ isSymbolicLink <$> getSymbolicLinkStatus f) $ do
catKeyFile (toRawFilePath f) >>= \case
Nothing -> noop
Just k -> do
topf <- inRepo $ toTopFilePath $ toRawFilePath f
Database.Keys.runWriter $ \h -> liftIO $ do
Database.Keys.SQL.addAssociatedFile k topf h
Database.Keys.SQL.addInodeCaches k [ic] h
liftIO $ void cleanup
Database.Keys.closeDb
-- The gitatrributes used to have a line that prevented filtering dotfiles,
-- but now they are filtered and annex.dotfiles controls whether they get
-- added to the annex.
--
-- Only done on local gitattributes, not any gitatrributes that might be
-- checked into the repository.
updateSmudgeFilter :: Annex ()
updateSmudgeFilter = do
lf <- fromRawFilePath <$> Annex.fromRepo Git.attributesLocal
ls <- liftIO $ lines <$> catchDefaultIO "" (readFileStrict lf)
let ls' = removedotfilter ls
when (ls /= ls') $
liftIO $ writeFile lf (unlines ls')
where
removedotfilter ("* filter=annex":".* !filter":rest) =
"* filter=annex" : removedotfilter rest
removedotfilter (l:ls) = l : removedotfilter ls
removedotfilter [] = []