git-annex/Database/Export.hs
Joey Hess e60766543f
add annex.dbdir (WIP)
WIP: This is mostly complete, but there is a problem: createDirectoryUnder
throws an error when annex.dbdir is set to outside the git repo.

annex.dbdir is a workaround for filesystems where sqlite does not work,
due to eg, the filesystem not properly supporting locking.

It's intended to be set before initializing the repository. Changing it
in an existing repository can be done, but would be the same as making a
new repository and moving all the annexed objects into it. While the
databases get recreated from the git-annex branch in that situation, any
information that is in the databases but not stored in the branch gets
lost. It may be that no information ever gets stored in the databases
that cannot be reconstructed from the branch, but I have not verified
that.

Sponsored-by: Dartmouth College's Datalad project
2022-08-11 16:58:53 -04:00

329 lines
11 KiB
Haskell

{- Sqlite database used for exports to special remotes.
-
- Copyright 2017-2019 Joey Hess <id@joeyh.name>
-:
- Licensed under the GNU AGPL version 3 or higher.
-}
{-# LANGUAGE CPP #-}
{-# LANGUAGE QuasiQuotes, TypeFamilies, TemplateHaskell #-}
{-# LANGUAGE OverloadedStrings, GADTs, FlexibleContexts #-}
{-# LANGUAGE MultiParamTypeClasses, GeneralizedNewtypeDeriving #-}
{-# LANGUAGE RankNTypes #-}
{-# LANGUAGE DataKinds, FlexibleInstances #-}
{-# LANGUAGE UndecidableInstances #-}
#if MIN_VERSION_persistent_template(2,8,0)
{-# LANGUAGE DerivingStrategies #-}
{-# LANGUAGE StandaloneDeriving #-}
#endif
module Database.Export (
ExportHandle,
openDb,
closeDb,
writeLockDbWhile,
flushDbQueue,
addExportedLocation,
removeExportedLocation,
getExportedLocation,
isExportDirectoryEmpty,
getExportTreeCurrent,
recordExportTreeCurrent,
getExportTree,
getExportTreeKey,
addExportTree,
removeExportTree,
updateExportTree,
updateExportTree',
updateExportTreeFromLog,
updateExportDb,
ExportedId,
ExportedDirectoryId,
ExportTreeId,
ExportTreeCurrentId,
ExportUpdateResult(..),
ExportDiffUpdater,
runExportDiffUpdater,
) where
import Database.Types
import qualified Database.Queue as H
import Database.Init
import Annex.Locations
import Annex.Common hiding (delete)
import Types.Export
import Annex.Export
import qualified Logs.Export as Log
import Annex.LockFile
import Annex.LockPool
import Git.Types
import Git.Sha
import Git.FilePath
import qualified Git.DiffTree
import qualified Utility.RawFilePath as R
import Database.Persist.Sql hiding (Key)
import Database.Persist.TH
import qualified System.FilePath.ByteString as P
data ExportHandle = ExportHandle H.DbQueue UUID
share [mkPersist sqlSettings, mkMigrate "migrateExport"] [persistLowerCase|
-- Files that have been exported to the remote and are present on it.
Exported
key Key
file SFilePath
ExportedIndex key file
-- Directories that exist on the remote, and the files that are in them.
ExportedDirectory
subdir SFilePath
file SFilePath
ExportedDirectoryIndex subdir file
-- The content of the tree that has been exported to the remote.
-- Not all of these files are necessarily present on the remote yet.
ExportTree
key Key
file SFilePath
ExportTreeKeyFileIndex key file
ExportTreeFileKeyIndex file key
-- The tree stored in ExportTree
ExportTreeCurrent
tree SSha
UniqueTree tree
|]
{- Opens the database, creating it if it doesn't exist yet.
-
- Only a single process should write to the export at a time, so guard
- any writes with the gitAnnexExportLock.
-}
openDb :: UUID -> Annex ExportHandle
openDb u = do
dbdir <- calcRepo' (gitAnnexExportDbDir u)
let db = dbdir P.</> "db"
unlessM (liftIO $ R.doesPathExist db) $ do
initDb db $ void $
runMigrationSilent migrateExport
h <- liftIO $ H.openDbQueue db "exported"
return $ ExportHandle h u
closeDb :: ExportHandle -> Annex ()
closeDb (ExportHandle h _) = liftIO $ H.closeDbQueue h
queueDb :: ExportHandle -> SqlPersistM () -> IO ()
queueDb (ExportHandle h _) = H.queueDb h checkcommit
where
-- commit queue after 1000 changes
checkcommit sz _lastcommittime
| sz > 1000 = return True
| otherwise = return False
flushDbQueue :: ExportHandle -> IO ()
flushDbQueue (ExportHandle h _) = H.flushDbQueue h
recordExportTreeCurrent :: ExportHandle -> Sha -> IO ()
recordExportTreeCurrent h s = queueDb h $ do
deleteWhere ([] :: [Filter ExportTreeCurrent])
void $ insertUnique $ ExportTreeCurrent $ toSSha s
getExportTreeCurrent :: ExportHandle -> IO (Maybe Sha)
getExportTreeCurrent (ExportHandle h _) = H.queryDbQueue h $ do
l <- selectList ([] :: [Filter ExportTreeCurrent]) []
case l of
(s:[]) -> return $ Just $ fromSSha $
exportTreeCurrentTree $ entityVal s
_ -> return Nothing
addExportedLocation :: ExportHandle -> Key -> ExportLocation -> IO ()
addExportedLocation h k el = queueDb h $ do
void $ insertUnique $ Exported k ef
let edirs = map
(\ed -> ExportedDirectory (SFilePath (fromExportDirectory ed)) ef)
(exportDirectories el)
putMany edirs
where
ef = SFilePath (fromExportLocation el)
removeExportedLocation :: ExportHandle -> Key -> ExportLocation -> IO ()
removeExportedLocation h k el = queueDb h $ do
deleteWhere [ExportedKey ==. k, ExportedFile ==. ef]
let subdirs = map (SFilePath . fromExportDirectory)
(exportDirectories el)
deleteWhere [ExportedDirectoryFile ==. ef, ExportedDirectorySubdir <-. subdirs]
where
ef = SFilePath (fromExportLocation el)
{- Note that this does not see recently queued changes. -}
getExportedLocation :: ExportHandle -> Key -> IO [ExportLocation]
getExportedLocation (ExportHandle h _) k = H.queryDbQueue h $ do
l <- selectList [ExportedKey ==. k] []
return $ map (mkExportLocation . (\(SFilePath f) -> f) . exportedFile . entityVal) l
{- Note that this does not see recently queued changes. -}
isExportDirectoryEmpty :: ExportHandle -> ExportDirectory -> IO Bool
isExportDirectoryEmpty (ExportHandle h _) d = H.queryDbQueue h $ do
l <- selectList [ExportedDirectorySubdir ==. ed] []
return $ null l
where
ed = SFilePath $ fromExportDirectory d
{- Get locations in the export that might contain a key. -}
getExportTree :: ExportHandle -> Key -> IO [ExportLocation]
getExportTree (ExportHandle h _) k = H.queryDbQueue h $ do
l <- selectList [ExportTreeKey ==. k] []
return $ map (mkExportLocation . (\(SFilePath f) -> f) . exportTreeFile . entityVal) l
{- Get keys that might be currently exported to a location.
-
- Note that this does not see recently queued changes.
-}
getExportTreeKey :: ExportHandle -> ExportLocation -> IO [Key]
getExportTreeKey (ExportHandle h _) el = H.queryDbQueue h $ do
map (exportTreeKey . entityVal)
<$> selectList [ExportTreeFile ==. ef] []
where
ef = SFilePath (fromExportLocation el)
addExportTree :: ExportHandle -> Key -> ExportLocation -> IO ()
addExportTree h k loc = queueDb h $
void $ insertUnique $ ExportTree k ef
where
ef = SFilePath (fromExportLocation loc)
removeExportTree :: ExportHandle -> Key -> ExportLocation -> IO ()
removeExportTree h k loc = queueDb h $
deleteWhere [ExportTreeKey ==. k, ExportTreeFile ==. ef]
where
ef = SFilePath (fromExportLocation loc)
-- An action that is passed the old and new values that were exported,
-- and updates state.
type ExportDiffUpdater
= ExportHandle
-> Maybe Key
-- ^ old exported key
-> Maybe Key
-- ^ new exported key
-> Git.DiffTree.DiffTreeItem
-> Annex ()
mkExportDiffUpdater
:: (ExportHandle -> Key -> ExportLocation -> IO ())
-> (ExportHandle -> Key -> ExportLocation -> IO ())
-> ExportDiffUpdater
mkExportDiffUpdater removeold addnew h srcek dstek i = do
case srcek of
Nothing -> return ()
Just k -> liftIO $ removeold h k loc
case dstek of
Nothing -> return ()
Just k -> liftIO $ addnew h k loc
where
loc = mkExportLocation $ getTopFilePath $ Git.DiffTree.file i
runExportDiffUpdater :: ExportDiffUpdater -> ExportHandle -> Sha -> Sha -> Annex ()
runExportDiffUpdater updater h old new = do
(diff, cleanup) <- inRepo $
Git.DiffTree.diffTreeRecursive old new
forM_ diff $ \i -> do
srcek <- getek (Git.DiffTree.srcsha i)
dstek <- getek (Git.DiffTree.dstsha i)
updater h srcek dstek i
void $ liftIO cleanup
where
getek sha
| sha `elem` nullShas = return Nothing
| otherwise = Just <$> exportKey sha
{- Diff from the old to the new tree and update the ExportTree table. -}
updateExportTree :: ExportHandle -> Sha -> Sha -> Annex ()
updateExportTree = runExportDiffUpdater updateExportTree'
updateExportTree' :: ExportDiffUpdater
updateExportTree' = mkExportDiffUpdater removeExportTree addExportTree
{- Diff from the old to the new tree and update all tables in the export
- database. Should only be used when all the files in the new tree have
- been verified to already be present in the export remote. -}
updateExportDb :: ExportHandle -> Sha -> Sha -> Annex ()
updateExportDb = runExportDiffUpdater $ mkExportDiffUpdater removeold addnew
where
removeold h k loc = liftIO $ do
removeExportTree h k loc
removeExportedLocation h k loc
addnew h k loc = liftIO $ do
addExportTree h k loc
addExportedLocation h k loc
{- Runs an action with the database locked for write. Waits for any other
- writers to finish first. The queue is flushed at the end.
-
- This first updates the ExportTree table with any new information
- from the git-annex branch export log.
-}
writeLockDbWhile :: ExportHandle -> Annex a -> Annex a
writeLockDbWhile db@(ExportHandle _ u) a = do
updatelck <- takeExclusiveLock =<< calcRepo' (gitAnnexExportUpdateLock u)
exlck <- calcRepo' (gitAnnexExportLock u)
withExclusiveLock exlck $ do
bracket_ (setup updatelck) cleanup a
where
setup updatelck = do
void $ updateExportTreeFromLog' db
-- flush the update so it's available immediately to
-- anything waiting on the updatelck
liftIO $ flushDbQueue db
liftIO $ dropLock updatelck
cleanup = liftIO $ flushDbQueue db
data ExportUpdateResult = ExportUpdateSuccess | ExportUpdateConflict
deriving (Eq)
{- Updates the ExportTree table with information from the
- git-annex branch export log.
-
- This can safely be called whether the database is locked for write or
- not. Either way, it will block until the update is complete.
-}
updateExportTreeFromLog :: ExportHandle -> Annex ExportUpdateResult
updateExportTreeFromLog db@(ExportHandle _ u) = do
-- If another process or thread is performing the update,
-- this will block until it's done.
exlck <- calcRepo' (gitAnnexExportUpdateLock u)
withExclusiveLock exlck $ do
lck <- calcRepo' (gitAnnexExportLock u)
-- If the database is locked by something else,
-- this will not run the update. But, in that case,
-- writeLockDbWhile is running, and has already
-- completed the update, so we don't need to do anything.
mr <- tryExclusiveLock lck $
updateExportTreeFromLog' db
case mr of
Just r -> return r
Nothing -> do
old <- liftIO $ fromMaybe emptyTree
<$> getExportTreeCurrent db
l <- Log.getExport u
return $ case Log.exportedTreeishes l of
[] -> ExportUpdateSuccess
(new:[])
| new /= old -> ExportUpdateSuccess
| new == old -> ExportUpdateSuccess
_ts -> ExportUpdateConflict
{- The database should be locked when calling this. -}
updateExportTreeFromLog' :: ExportHandle -> Annex ExportUpdateResult
updateExportTreeFromLog' db@(ExportHandle _ u) = do
old <- liftIO $ fromMaybe emptyTree
<$> getExportTreeCurrent db
l <- Log.getExport u
case Log.exportedTreeishes l of
[] -> return ExportUpdateSuccess
(new:[])
| new /= old -> do
updateExportTree db old new
liftIO $ recordExportTreeCurrent db new
liftIO $ flushDbQueue db
return ExportUpdateSuccess
| new == old -> return ExportUpdateSuccess
_ts -> return ExportUpdateConflict