89b2542d3c
Added annex.skipunknown git config, that can be set to false to change the behavior of commands like `git annex get foo*`, to not skip over files/dirs that are not checked into git and are explicitly listed in the command line. Significant complexity was needed to handle git-annex add, which uses some git ls-files calls, but needs to not use --error-unmatch because of course the files are not known to git. annex.skipunknown is planned to change to default to false in a git-annex release in early 2022. There's a todo for that.
273 lines
8.7 KiB
Haskell
273 lines
8.7 KiB
Haskell
{- git-annex assistant sanity checker
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-
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- Copyright 2012, 2013 Joey Hess <id@joeyh.name>
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-
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- Licensed under the GNU AGPL version 3 or higher.
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-}
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{-# LANGUAGE CPP #-}
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{-# LANGUAGE OverloadedStrings #-}
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module Assistant.Threads.SanityChecker (
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sanityCheckerStartupThread,
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sanityCheckerDailyThread,
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sanityCheckerHourlyThread
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) where
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import Assistant.Common
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import Assistant.DaemonStatus
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import Assistant.Alert
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import Assistant.Repair
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import Assistant.Drop
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import Assistant.Ssh
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import Assistant.TransferQueue
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import Assistant.Types.UrlRenderer
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import Assistant.Restart
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import qualified Annex.Branch
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import qualified Git
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import qualified Git.LsFiles
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import qualified Git.Command.Batch
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import qualified Git.Config
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import Utility.ThreadScheduler
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import qualified Assistant.Threads.Watcher as Watcher
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import Utility.Batch
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import Utility.NotificationBroadcaster
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import Utility.HumanTime
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import Utility.Tense
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import Git.Repair
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import Git.Index
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import Assistant.Unused
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import Logs.Unused
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import Types.Transfer
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import Annex.Path
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import Annex.Tmp
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import qualified Annex
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#ifdef WITH_WEBAPP
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import Assistant.WebApp.Types
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#endif
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#ifndef mingw32_HOST_OS
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import Utility.LogFile
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import Utility.DiskFree
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#endif
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import Data.Time.Clock.POSIX
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import qualified Data.Text as T
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{- This thread runs once at startup, and most other threads wait for it
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- to finish. (However, the webapp thread does not, to prevent the UI
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- being nonresponsive.) -}
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sanityCheckerStartupThread :: Maybe Duration -> NamedThread
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sanityCheckerStartupThread startupdelay = namedThreadUnchecked "SanityCheckerStartup" $ do
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{- Stale git locks can prevent commits from happening, etc. -}
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void $ repairStaleGitLocks =<< liftAnnex gitRepo
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{- A corrupt index file can prevent the assistant from working at
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- all, so detect and repair. -}
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ifM (not <$> liftAnnex (inRepo checkIndexFast))
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( do
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notice ["corrupt index file found at startup; removing and restaging"]
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liftAnnex $ inRepo $ nukeFile . indexFile
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{- Normally the startup scan avoids re-staging files,
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- but with the index deleted, everything needs to be
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- restaged. -}
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modifyDaemonStatus_ $ \s -> s { forceRestage = True }
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, whenM (liftAnnex $ inRepo missingIndex) $ do
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debug ["no index file; restaging"]
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modifyDaemonStatus_ $ \s -> s { forceRestage = True }
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)
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{- If the git-annex index file is corrupt, it's ok to remove it;
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- the data from the git-annex branch will be used, and the index
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- will be automatically regenerated. -}
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unlessM (liftAnnex $ Annex.Branch.withIndex $ inRepo $ Git.Repair.checkIndexFast) $ do
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notice ["corrupt annex/index file found at startup; removing"]
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liftAnnex $ liftIO . nukeFile =<< fromRepo gitAnnexIndex
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{- Fix up ssh remotes set up by past versions of the assistant. -}
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liftIO $ fixUpSshRemotes
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{- Clean up old temp files. -}
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void $ liftAnnex $ tryNonAsync $ cleanupOtherTmp
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{- If there's a startup delay, it's done here. -}
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liftIO $ maybe noop (threadDelaySeconds . Seconds . fromIntegral . durationSeconds) startupdelay
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{- Notify other threads that the startup sanity check is done. -}
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status <- getDaemonStatus
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liftIO $ sendNotification $ startupSanityCheckNotifier status
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{- This thread wakes up hourly for inxepensive frequent sanity checks. -}
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sanityCheckerHourlyThread :: NamedThread
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sanityCheckerHourlyThread = namedThread "SanityCheckerHourly" $ forever $ do
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liftIO $ threadDelaySeconds $ Seconds oneHour
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hourlyCheck
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{- This thread wakes up daily to make sure the tree is in good shape. -}
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sanityCheckerDailyThread :: UrlRenderer -> NamedThread
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sanityCheckerDailyThread urlrenderer = namedThread "SanityCheckerDaily" $ forever $ do
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waitForNextCheck
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debug ["starting sanity check"]
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void $ alertWhile sanityCheckAlert go
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debug ["sanity check complete"]
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where
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go = do
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modifyDaemonStatus_ $ \s -> s { sanityCheckRunning = True }
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now <- liftIO getPOSIXTime -- before check started
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r <- either showerr return
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=<< (tryIO . batch) <~> dailyCheck urlrenderer
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modifyDaemonStatus_ $ \s -> s
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{ sanityCheckRunning = False
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, lastSanityCheck = Just now
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}
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return r
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showerr e = do
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liftAnnex $ warning $ show e
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return False
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{- Only run one check per day, from the time of the last check. -}
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waitForNextCheck :: Assistant ()
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waitForNextCheck = do
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v <- lastSanityCheck <$> getDaemonStatus
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now <- liftIO getPOSIXTime
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liftIO $ threadDelaySeconds $ Seconds $ calcdelay now v
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where
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calcdelay _ Nothing = oneDay
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calcdelay now (Just lastcheck)
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| lastcheck < now = max oneDay $
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oneDay - truncate (now - lastcheck)
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| otherwise = oneDay
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{- It's important to stay out of the Annex monad as much as possible while
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- running potentially expensive parts of this check, since remaining in it
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- will block the watcher. -}
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dailyCheck :: UrlRenderer -> Assistant Bool
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dailyCheck urlrenderer = do
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checkRepoExists
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g <- liftAnnex gitRepo
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batchmaker <- liftIO getBatchCommandMaker
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-- Find old unstaged symlinks, and add them to git.
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(unstaged, cleanup) <- liftIO $ Git.LsFiles.notInRepo [] False ["."] g
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now <- liftIO getPOSIXTime
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forM_ unstaged $ \file -> do
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let file' = fromRawFilePath file
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ms <- liftIO $ catchMaybeIO $ getSymbolicLinkStatus file'
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case ms of
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Just s | toonew (statusChangeTime s) now -> noop
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| isSymbolicLink s -> addsymlink file' ms
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_ -> noop
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liftIO $ void cleanup
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{- Allow git-gc to run once per day. More frequent gc is avoided
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- by default to avoid slowing things down. Only run repacks when 100x
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- the usual number of loose objects are present; we tend
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- to have a lot of small objects and they should not be a
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- significant size. -}
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when (Git.Config.getMaybe "gc.auto" g == Just "0") $
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liftIO $ void $ Git.Command.Batch.run batchmaker
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[ Param "-c", Param "gc.auto=670000"
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, Param "gc"
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, Param "--auto"
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] g
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{- Check if the unused files found last time have been dealt with. -}
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checkOldUnused urlrenderer
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{- Run git-annex unused once per day. This is run as a separate
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- process to stay out of the annex monad and so it can run as a
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- batch job. -}
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program <- liftIO programPath
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let (program', params') = batchmaker (program, [Param "unused"])
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void $ liftIO $ boolSystem program' params'
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{- Invalidate unused keys cache, and queue transfers of all unused
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- keys, or if no transfers are called for, drop them. -}
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unused <- liftAnnex unusedKeys'
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void $ liftAnnex $ setUnusedKeys unused
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forM_ unused $ \k -> do
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unlessM (queueTransfers "unused" Later k (AssociatedFile Nothing) Upload) $
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handleDrops "unused" True k (AssociatedFile Nothing) []
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return True
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where
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toonew timestamp now = now < (realToFrac (timestamp + slop) :: POSIXTime)
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slop = fromIntegral tenMinutes
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insanity msg = do
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liftAnnex $ warning msg
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void $ addAlert $ sanityCheckFixAlert msg
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addsymlink file s = do
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Watcher.runHandler Watcher.onAddSymlink file s
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insanity $ "found unstaged symlink: " ++ file
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hourlyCheck :: Assistant ()
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hourlyCheck = do
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checkRepoExists
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#ifndef mingw32_HOST_OS
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checkLogSize 0
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#else
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noop
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#endif
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#ifndef mingw32_HOST_OS
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{- Rotate logs once when total log file size is > 2 mb.
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-
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- If total log size is larger than the amount of free disk space,
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- continue rotating logs until size is < 2 mb, even if this
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- results in immediately losing the just logged data.
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-}
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checkLogSize :: Int -> Assistant ()
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checkLogSize n = do
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f <- liftAnnex $ fromRepo gitAnnexLogFile
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logs <- liftIO $ listLogs f
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totalsize <- liftIO $ sum <$> mapM getFileSize logs
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when (totalsize > 2 * oneMegabyte) $ do
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notice ["Rotated logs due to size:", show totalsize]
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liftIO $ openLog f >>= handleToFd >>= redirLog
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when (n < maxLogs + 1) $ do
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df <- liftIO $ getDiskFree $ takeDirectory f
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case df of
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Just free
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| free < fromIntegral totalsize ->
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checkLogSize (n + 1)
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_ -> noop
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where
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oneMegabyte :: Integer
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oneMegabyte = 1000000
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#endif
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oneHour :: Int
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oneHour = 60 * 60
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oneDay :: Int
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oneDay = 24 * oneHour
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{- If annex.expireunused is set, find any keys that have lingered unused
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- for the specified duration, and remove them.
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-
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- Otherwise, check to see if unused keys are piling up, and let the user
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- know. -}
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checkOldUnused :: UrlRenderer -> Assistant ()
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checkOldUnused urlrenderer = go =<< annexExpireUnused <$> liftAnnex Annex.getGitConfig
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where
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go (Just Nothing) = noop
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go (Just (Just expireunused)) = expireUnused (Just expireunused)
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go Nothing = maybe noop promptconfig =<< describeUnusedWhenBig
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promptconfig msg =
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#ifdef WITH_WEBAPP
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do
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button <- mkAlertButton True (T.pack "Configure") urlrenderer ConfigUnusedR
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void $ addAlert $ unusedFilesAlert [button] $ T.unpack $ renderTense Present msg
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#else
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debug [show $ renderTense Past msg]
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#endif
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checkRepoExists :: Assistant ()
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checkRepoExists = do
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g <- liftAnnex gitRepo
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liftIO $ unlessM (doesDirectoryExist $ fromRawFilePath $ Git.repoPath g) $
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terminateSelf
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