e60766543f
WIP: This is mostly complete, but there is a problem: createDirectoryUnder throws an error when annex.dbdir is set to outside the git repo. annex.dbdir is a workaround for filesystems where sqlite does not work, due to eg, the filesystem not properly supporting locking. It's intended to be set before initializing the repository. Changing it in an existing repository can be done, but would be the same as making a new repository and moving all the annexed objects into it. While the databases get recreated from the git-annex branch in that situation, any information that is in the databases but not stored in the branch gets lost. It may be that no information ever gets stored in the databases that cannot be reconstructed from the branch, but I have not verified that. Sponsored-by: Dartmouth College's Datalad project
171 lines
5.7 KiB
Haskell
171 lines
5.7 KiB
Haskell
{- Sqlite database of ContentIdentifiers imported from special remotes.
|
|
-
|
|
- Copyright 2019 Joey Hess <id@joeyh.name>
|
|
-:
|
|
- Licensed under the GNU AGPL version 3 or higher.
|
|
-}
|
|
|
|
{-# LANGUAGE CPP #-}
|
|
{-# LANGUAGE QuasiQuotes, TypeFamilies, TemplateHaskell #-}
|
|
{-# LANGUAGE OverloadedStrings, GADTs, FlexibleContexts, EmptyDataDecls #-}
|
|
{-# LANGUAGE MultiParamTypeClasses, GeneralizedNewtypeDeriving #-}
|
|
{-# LANGUAGE RankNTypes #-}
|
|
{-# LANGUAGE DataKinds, FlexibleInstances #-}
|
|
{-# LANGUAGE UndecidableInstances #-}
|
|
#if MIN_VERSION_persistent_template(2,8,0)
|
|
{-# LANGUAGE DerivingStrategies #-}
|
|
{-# LANGUAGE StandaloneDeriving #-}
|
|
#endif
|
|
|
|
module Database.ContentIdentifier (
|
|
ContentIdentifierHandle,
|
|
openDb,
|
|
closeDb,
|
|
flushDbQueue,
|
|
recordContentIdentifier,
|
|
getContentIdentifiers,
|
|
getContentIdentifierKeys,
|
|
recordAnnexBranchTree,
|
|
getAnnexBranchTree,
|
|
needsUpdateFromLog,
|
|
updateFromLog,
|
|
ContentIdentifiersId,
|
|
AnnexBranchId,
|
|
) where
|
|
|
|
import Database.Types
|
|
import qualified Database.Queue as H
|
|
import Database.Init
|
|
import Annex.Locations
|
|
import Annex.Common hiding (delete)
|
|
import qualified Annex.Branch
|
|
import Types.Import
|
|
import Types.RemoteState
|
|
import Git.Types
|
|
import Git.Sha
|
|
import Git.FilePath
|
|
import qualified Git.Ref
|
|
import qualified Git.DiffTree as DiffTree
|
|
import Logs
|
|
import qualified Logs.ContentIdentifier as Log
|
|
import qualified Utility.RawFilePath as R
|
|
|
|
import Database.Persist.Sql hiding (Key)
|
|
import Database.Persist.TH
|
|
import Database.Persist.Sqlite (runSqlite)
|
|
import qualified System.FilePath.ByteString as P
|
|
import qualified Data.Text as T
|
|
|
|
data ContentIdentifierHandle = ContentIdentifierHandle H.DbQueue
|
|
|
|
share [mkPersist sqlSettings, mkMigrate "migrateContentIdentifier"] [persistLowerCase|
|
|
ContentIdentifiers
|
|
remote UUID
|
|
cid ContentIdentifier
|
|
key Key
|
|
ContentIndentifiersKeyRemoteCidIndex key remote cid
|
|
-- The last git-annex branch tree sha that was used to update
|
|
-- ContentIdentifiers
|
|
AnnexBranch
|
|
tree SSha
|
|
UniqueTree tree
|
|
|]
|
|
|
|
{- Opens the database, creating it if it doesn't exist yet.
|
|
-
|
|
- Only a single process should write to the database at a time, so guard
|
|
- any writes with the gitAnnexContentIdentifierLock.
|
|
-}
|
|
openDb :: Annex ContentIdentifierHandle
|
|
openDb = do
|
|
dbdir <- calcRepo' gitAnnexContentIdentifierDbDir
|
|
let db = dbdir P.</> "db"
|
|
ifM (liftIO $ not <$> R.doesPathExist db)
|
|
( initDb db $ void $
|
|
runMigrationSilent migrateContentIdentifier
|
|
-- Migrate from old version of database, which had
|
|
-- an incorrect uniqueness constraint on the
|
|
-- ContentIdentifiers table.
|
|
, liftIO $ runSqlite (T.pack (fromRawFilePath db)) $ void $
|
|
runMigrationSilent migrateContentIdentifier
|
|
)
|
|
h <- liftIO $ H.openDbQueue db "content_identifiers"
|
|
return $ ContentIdentifierHandle h
|
|
|
|
closeDb :: ContentIdentifierHandle -> Annex ()
|
|
closeDb (ContentIdentifierHandle h) = liftIO $ H.closeDbQueue h
|
|
|
|
queueDb :: ContentIdentifierHandle -> SqlPersistM () -> IO ()
|
|
queueDb (ContentIdentifierHandle h) = H.queueDb h checkcommit
|
|
where
|
|
-- commit queue after 1000 changes
|
|
checkcommit sz _lastcommittime
|
|
| sz > 1000 = return True
|
|
| otherwise = return False
|
|
|
|
flushDbQueue :: ContentIdentifierHandle -> IO ()
|
|
flushDbQueue (ContentIdentifierHandle h) = H.flushDbQueue h
|
|
|
|
-- Be sure to also update the git-annex branch when using this.
|
|
recordContentIdentifier :: ContentIdentifierHandle -> RemoteStateHandle -> ContentIdentifier -> Key -> IO ()
|
|
recordContentIdentifier h (RemoteStateHandle u) cid k = queueDb h $ do
|
|
void $ insertUnique $ ContentIdentifiers u cid k
|
|
|
|
getContentIdentifiers :: ContentIdentifierHandle -> RemoteStateHandle -> Key -> IO [ContentIdentifier]
|
|
getContentIdentifiers (ContentIdentifierHandle h) (RemoteStateHandle u) k =
|
|
H.queryDbQueue h $ do
|
|
l <- selectList
|
|
[ ContentIdentifiersKey ==. k
|
|
, ContentIdentifiersRemote ==. u
|
|
] []
|
|
return $ map (contentIdentifiersCid . entityVal) l
|
|
|
|
getContentIdentifierKeys :: ContentIdentifierHandle -> RemoteStateHandle -> ContentIdentifier -> IO [Key]
|
|
getContentIdentifierKeys (ContentIdentifierHandle h) (RemoteStateHandle u) cid =
|
|
H.queryDbQueue h $ do
|
|
l <- selectList
|
|
[ ContentIdentifiersCid ==. cid
|
|
, ContentIdentifiersRemote ==. u
|
|
] []
|
|
return $ map (contentIdentifiersKey . entityVal) l
|
|
|
|
recordAnnexBranchTree :: ContentIdentifierHandle -> Sha -> IO ()
|
|
recordAnnexBranchTree h s = queueDb h $ do
|
|
deleteWhere ([] :: [Filter AnnexBranch])
|
|
void $ insertUnique $ AnnexBranch $ toSSha s
|
|
|
|
getAnnexBranchTree :: ContentIdentifierHandle -> IO Sha
|
|
getAnnexBranchTree (ContentIdentifierHandle h) = H.queryDbQueue h $ do
|
|
l <- selectList ([] :: [Filter AnnexBranch]) []
|
|
case l of
|
|
(s:[]) -> return $ fromSSha $ annexBranchTree $ entityVal s
|
|
_ -> return emptyTree
|
|
|
|
{- Check if the git-annex branch has been updated and the database needs
|
|
- to be updated with any new content identifiers in it. -}
|
|
needsUpdateFromLog :: ContentIdentifierHandle -> Annex (Maybe (Sha, Sha))
|
|
needsUpdateFromLog db = do
|
|
oldtree <- liftIO $ getAnnexBranchTree db
|
|
inRepo (Git.Ref.tree Annex.Branch.fullname) >>= \case
|
|
Just currtree | currtree /= oldtree ->
|
|
return $ Just (oldtree, currtree)
|
|
_ -> return Nothing
|
|
|
|
{- The database should be locked for write when calling this. -}
|
|
updateFromLog :: ContentIdentifierHandle -> (Sha, Sha) -> Annex ()
|
|
updateFromLog db (oldtree, currtree) = do
|
|
(l, cleanup) <- inRepo $
|
|
DiffTree.diffTreeRecursive oldtree currtree
|
|
mapM_ go l
|
|
void $ liftIO $ cleanup
|
|
liftIO $ do
|
|
recordAnnexBranchTree db currtree
|
|
flushDbQueue db
|
|
where
|
|
go ti = case extLogFileKey remoteContentIdentifierExt (getTopFilePath (DiffTree.file ti)) of
|
|
Nothing -> return ()
|
|
Just k -> do
|
|
l <- Log.getContentIdentifiers k
|
|
liftIO $ forM_ l $ \(rs, cids) ->
|
|
forM_ cids $ \cid ->
|
|
recordContentIdentifier db rs cid k
|