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1368 commits

Author SHA1 Message Date
Joey Hess
3da0064657 assistant unused file handling
Make sanity checker run git annex unused daily, and queue up transfers
of unused files to any remotes that will have them. The transfer retrying
code works for us here, so eg when a backup disk remote is plugged in,
any transfers to it are done. Once the unused files reach a remote,
they'll be removed locally as unwanted.

If the setup does not cause unused files to go to a remote, they'll pile
up, and the sanity checker detects this using some heuristics that are
pretty good -- 1000 unused files, or 10% of disk used by unused files,
or more disk wasted by unused files than is left free. Once it detects
this, it pops up an alert in the webapp, with a button to take action.

TODO: Webapp UI to configure this, and also the ability to launch an
immediate cleanup of all unused files.

This commit was sponsored by Simon Michael.
2014-01-22 22:53:18 -04:00
Joey Hess
ed7c61914c assistant: Run the periodic git gc in batch mode. 2014-01-22 17:11:41 -04:00
Joey Hess
4b55afe9e9 add "unused" preferred content expression
With a really nice optimisation that keeps it from having any overhead
in normal operation!

This commit was sponsored by Ulises Vitulli.
2014-01-22 16:35:32 -04:00
Joey Hess
f2713a3bb9 benchmarked numcopies .gitattributes in preferred content
Checking .gitattributes adds a full minute to a git annex find looking for
files that don't have enough copies. 2:25 increasts to 3:27. I feel this is
too much of a slowdown to justify making it the default. So, exposed two
versions of the preferred content expression, a slow one and a fast but
approximate one.

I'm using the approximate one in the default preferred content expressions
to avoid slowing down the assistant.
2014-01-21 18:49:25 -04:00
Joey Hess
78ead70ea4 repair: Check git version at run time. 2014-01-21 13:22:48 -04:00
Joey Hess
3159da2693 Add and use numcopiesneeded preferred content expression.
* Add numcopiesneeded preferred content expression.
* Client, transfer, incremental backup, and archive repositories
  now want to get content that does not yet have enough copies.

This means the asssistant will make copies of files that don't yet
meet the configured numcopies, even to places that would not normally want
the file.

For example, if numcopies is 4, and there are 2 client repos and
2 transfer repos, and 2 removable backup drives, the file will be sent
to both transfer repos in order to make 4 copies. Once a removable drive
get a copy of the file, it will be dropped from one transfer repo or the
other (but not both).

Another example, numcopies is 3 and there is a client that has a backup
removable drive and two small archive repos. Normally once one of the small
archives has a file, it will not be put into the other one. But, to satisfy
numcopies, the assistant will duplicate it into the other small archive
too, if the backup repo is not available to receive the file.

I notice that these examples are fairly unlikely setups .. the old behavior
was not too bad, but it's nice to finally have it really correct.

.. Almost. I have skipped checking the annex.numcopies .gitattributes
out of fear it will be too slow.

This commit was sponsored by Florian Schlegel.
2014-01-20 17:35:29 -04:00
Joey Hess
d66535f065 global numcopies setting
* numcopies: New command, sets global numcopies value that is seen by all
  clones of a repository.
* The annex.numcopies git config setting is deprecated. Once the numcopies
  command is used to set the global number of copies, any annex.numcopies
  git configs will be ignored.
* assistant: Make the prefs page set the global numcopies.

This global numcopies setting is needed to let preferred content
expressions operate on numcopies.

It's also convenient, because typically if you want git-annex to preserve N
copies of files in a repo, you want it to do that no matter which repo it's
running in. Making it global avoids needing to warn the user about gotchas
involving inconsistent annex.numcopies settings.
(See changes to doc/numcopies.mdwn.)

Added a new variety of git-annex branch log file, that holds only 1 value.
Will probably be useful for other stuff later.

This commit was sponsored by Nicolas Pouillard.
2014-01-20 16:47:56 -04:00
Joey Hess
b6ba0bd556 sync --content: New option that makes the content of annexed files be transferred.
Similar to the assistant, this honors any configured preferred content
expressions.

I am not entirely happpy with the implementation. It would be nicer if
the seek function returned a list of actions which included the individual
file gets and copies and drops, rather than the current list of calls to
syncContent. This would allow getting rid of the somewhat reundant display
of "sync file [ok|failed]" after the get/put display.

But, do that, withFilesInGit would need to somehow be able to construct
such a mixed action list. And it would be less efficient than the current
implementation, which is able to reuse several values between eg get and
drop.

Note that currently this does not try to satisfy numcopies when
getting/putting files (numcopies are of course checked when dropping
files!) This makes it like the assistant, and unlike get --auto
and copy --auto, which do duplicate files when numcopies is not yet
satisfied. I don't know if this is the right decision; it only seemed to
make sense to have this parallel the assistant as far as possible to start
with, since I know the assistant works.

This commit was sponsored by Øyvind Andersen Holm.
2014-01-19 17:49:54 -04:00
Joey Hess
85185b8f50 Allow --all to be mixed with matching options like --copies and --in (but not --include and --exclude). 2014-01-18 14:58:56 -04:00
Joey Hess
2b1a7895fc list: Fix specifying of files to list. 2014-01-18 13:25:06 -04:00
Joey Hess
456c9eedb0 status: Support --json. 2014-01-18 12:05:10 -04:00
Joey Hess
1d90e72e91 Remove --json option from commands not supporting it. 2014-01-18 11:54:43 -04:00
Joey Hess
3cbb366ebc Really fix FTBFS on mipsel and sparc due to test suite not being available on those architectures. 2014-01-17 14:48:56 -04:00
Joey Hess
31b80e55f8 prep release 2014-01-16 11:38:16 -04:00
Joey Hess
4e19e87921 repair: Fix bug in packed refs file exploding code that caused a .gitrefs directory to be created instead of .git/refs 2014-01-15 16:34:18 -04:00
Joey Hess
daec7ffafe Fix FTBFS on mipsel and sparc due to test suite not being available on those architectures. 2014-01-15 12:49:56 -04:00
Joey Hess
18a3e51d52 assistant: Detect if .git/annex/index is corrupt at startup, and recover. 2014-01-14 17:10:30 -04:00
Joey Hess
d07f2d7865 Fix a long-standing bug that could cause the wrong index file to be used when committing to the git-annex branch, if GIT_INDEX_FILE is set in the environment. This typically resulted in git-annex branch log files being committed to the master branch and later showing up in the work tree. (These log files can be safely removed.) 2014-01-14 15:36:33 -04:00
Joey Hess
5e6e89f423 repair: Support old git versions from before git fsck --no-dangling was implemented. 2014-01-13 18:10:45 -04:00
Joey Hess
7ee87c7bd6 map: Fix display of v5 direct mode repos.
The direct mode guard confused map. So need to run through Annex.new to get
the actual path to the repo.
2014-01-13 15:36:02 -04:00
Joey Hess
5a5adc44f5 Refuse to build with git older than 1.7.1.1, which is needed for git checkout -B 2014-01-13 15:17:48 -04:00
Joey Hess
0cac4402ac Android: Avoid passing --clobber to busybox wget. 2014-01-13 14:52:49 -04:00
Joey Hess
c20f31a1ad add GETAVAILABILITY to external special remote protocol
And some reworking of types, and added an annex-availability git config
setting.
2014-01-13 14:41:10 -04:00
Joey Hess
57edce8ad9 external special remote protocol: Added GETGITDIR. 2014-01-13 14:00:09 -04:00
Joey Hess
85272d8a98 Added tahoe special remote.
Known problems:

1. Tries to tahoe start when daemon is already running.

2. If multiple tahoe remotes are set up on the same computer,
   they will have the same node.url configured by default,
   and this confuses tahoe commands.

This commit was sponsored by LeastAuthority.com
2014-01-08 16:14:41 -04:00
Joey Hess
5e23dfabd6 add DEBUG 2014-01-07 13:23:58 -04:00
Joey Hess
0a98f1be15 prep release 2014-01-07 12:25:12 -04:00
Joey Hess
1c02fc4987 no lsof on kfreebsd 2014-01-07 12:12:36 -04:00
Joey Hess
e5b4d447b6 assistant: Start a new git-annex transferkeys process after a network connection change
So that remotes that use a persistent network connection are restarted.

A remote might keep open a long duration network connection, and could
fail to deal well with losing the connection. This is particularly a
concern now that we have external special reotes. An external
special remote that is implemented naively might open the connection only
when PREPARE is sent, and if it loses connection, throw errors on each
request that is made.

(Note that the ssh connection caching should not have this problem; if the
long-duration ssh process loses connection, the named pipe is disconnected
and the next ssh attempt will reconnect. Also, XMPP already deals with
disconnection robustly in its own way.)

There's no way for git-annex to know if a lost network connection actually
affects a given remote, which might have a transfer in process. It does not
make sense to force kill the transferkeys process every time the NetWatcher
detects a change. (Especially because the NetWatcher sometimes polls 1
change per hour.)

In any case, the NetWatcher only detects connection to a network, not
disconnection. So if a transfer is in progress over the network, and the
network goes down, that will need to time out on its own.

An alternate approch that was considered is to use a separate transferkeys
process for each remote, and detect when a request fails, and assume that
means that process is in a failing state and restart it. The problem with
that approach is that if a resource is not available and a remote fails
every time, it degrades to starting a new transferkeys process for every
file transfer, which is too expensive.

Instead, this commit only handles the network reconnection case, and restarts
transferkeys only once the network has reconnected and another transfer needs
to be made. So, a transferkeys process will be reused for 1 hour, or until the
next network connection.

----

The NotificationBroadcaster was rewritten to use TMVars rather than MSampleVars,
to allow checking without blocking if a notification has been received.

----

This commit was sponsored by Tobias Brunner.
2014-01-06 16:03:39 -04:00
Joey Hess
b92b54bd42 assistant: Fixed several minor memory leaks that manifested when adding a large number of files. 2014-01-05 21:30:48 -04:00
Joey Hess
0cc1bd7e53 add: Fix rollback when disk is completely full.
Noticed that it was possible for add to move a file to .git/annex/objects
and not make the link if the disk was full. This happened because the
location log update failed, and so addLink never got a chance to run.
Running addLink first fixes it; on error it will unwind by moving the file
back to where it was originally.
2014-01-05 14:09:57 -04:00
Joey Hess
f9e7b6cf61 addurl, importfeed: Honor annex.diskreserve as long as the size of the url can be checked.
This adds a http HEAD before the download is done. That was already the
case when the assistant was running, and it seems worth it to avoid filling
up the whole disk, like happened to my server today.
2014-01-04 15:08:06 -04:00
Joey Hess
fdcc04096c assistant: Ensure that .ssh/config and .ssh/authorized_keys are not group or world writable when writing to those files, as that can make ssh refuse to use them, if it allows another user to write to them. 2014-01-03 17:44:12 -04:00
Joey Hess
3e68c1c2fd add remote state logs
This allows a remote to store a piece of arbitrary state associated with a
key. This is needed to support Tahoe, where the file-cap is calculated from
the data stored in it, and used to retrieve a key later. Glacier also would
be much improved by using this.

GETSTATE and SETSTATE are added to the external special remote protocol.

Note that the state is left as-is even when a key is removed from a remote.
It's up to the remote to decide when it wants to clear the state.

The remote state log, $KEY.log.rmt, is a UUID-based log. However,
rather than using the old UUID-based log format, I created a new variant
of that format. The new varient is more space efficient (since it lacks the
"timestamp=" hack, and easier to parse (and the parser doesn't mess with
whitespace in the value), and avoids compatability cruft in the old one.

This seemed worth cleaning up for these new files, since there could be a
lot of them, while before UUID-based logs were only used for a few log
files at the top of the git-annex branch. The transition code has also
been updated to handle these new UUID-based logs.

This commit was sponsored by Daniel Hofer.
2014-01-03 16:35:57 -04:00
Joey Hess
3560fb411d wanted, schedule: Avoid printing "ok" after requested value. 2014-01-03 14:51:32 -04:00
Joey Hess
f7727d2df1 Remotes can now be made read-only, by setting remote.<name>.annex-readonly 2014-01-02 13:12:32 -04:00
Joey Hess
f83e5c75dc Assistant: Remove stale MERGE_HEAD files in lockfile cleanup.
See http://git-annex.branchable.com/forum/How_to_resolve_a_interrupted_merge_in_direct_mode__63__/
2014-01-01 22:05:33 -04:00
Joey Hess
858eb26303 Avoid looping if long-running git cat-file or git hash-object crashes and keeps crashing when restarted. 2014-01-01 21:42:25 -04:00
Joey Hess
8e3032df2d added GETWANTED, SETWANTED for Tobias's flickr remote
This was unexpectedly difficult because of a depdenency cycle. To parse a
preferred content expression involves several things that need to operate
on the list of remotes. Which needs Remote.External. The only way to avoid
this cycle (I tried breaking it at several points) was to skip parsing the
expression in SETWANTED.

That's sorta ok, because git-annex already has to deal with unparsable
preferred content expressions being stored, in order to handle eg,
upgrades. But I'm still not very happy that I cannot check it.

I feel this is a strong indication that I need to beware of further
bloating the special remote protocol interface.
2014-01-01 20:12:20 -04:00
Joey Hess
079f463d51 mirror: Support --all (and --unused). 2014-01-01 17:39:33 -04:00
Joey Hess
fab7adb161 Windows: Avoid eating stdin when running ssh to add a authorized key, since this is used for password prompting. 2014-01-01 15:49:51 -04:00
Joey Hess
49aad120b9 Windows: Fix bug in direct mode merge code that could cause files in subdirectories to go missing. 2013-12-31 16:39:11 -04:00
Joey Hess
ed1fcab6d7 external special remote protocol: Added GETUUID. 2013-12-31 13:50:18 -04:00
Joey Hess
515e2fef54 prep release 2013-12-30 14:20:55 -04:00
Joey Hess
d6d5b0a6d8 Android: Avoid trying to use Android's own ionice, which does not allow specifying a command to run. Fixes transferring files to/from android and probably a few other things. 2013-12-29 17:32:08 -04:00
Joey Hess
81f498559a importfeed: Support youtube playlists. 2013-12-29 15:52:20 -04:00
Joey Hess
b1d7474c1d Auto-upgrade v3 indirect repos to v5 with no changes. This also fixes a problem when a direct mode repo was somehow set to v3 rather than v4, and so the automatic direct mode upgrade to v5 was not done. 2013-12-29 13:06:23 -04:00
Joey Hess
7f6685c16e addurl, importfeed: Sanitize | and some other symbols and special characters. 2013-12-27 17:52:20 -04:00
Joey Hess
307c57b29b add git-shell wrappers 2013-12-27 16:06:11 -04:00
Joey Hess
5972ee50fa external special remotes working 2013-12-27 14:13:52 -04:00