Commit graph

282 commits

Author SHA1 Message Date
Joey Hess
aacd9b190d
Linux standalone: Include locale files in the bundle, and generate locale definition files for the locales in use when starting runshell.
Currently only done for utf-8 locales because the charset can easily be
told for those. Other locales don't include the charset in their name.

The locale definition is generated under git-annex.linux/locales.
So, this only works if the user can write there.

If locale generation fails for any reason, it's silently skipped.

The git-annex-standalone.deb installs the bundle under /usr, so this locale
generation won't work for non-root users.
2016-10-04 16:37:43 -04:00
Joey Hess
c079811226
Linux standalone: Add back the LOCPATH=/dev/null hack to avoid the system locale-archive being read.
Version mismatches between the system locale-archive and the glibc in the
bundle have been observed to cause git crashes.

Unfortunately, this causes locales to not be used in the linux standalone
bundle, as was the case until version 6.20160419.

glibc hardcodes the path to /usr/lib/locale/locale-archive and does not
let an environment variable cause a different locale-archive file to be used.

The only other option to include locales in the bundle would be to include
exploded locale definition directories in the bundle for a number of
locales, generated by localedef. But these take at least 300 kb per locale,
and there are a great many locales; it would be hundreds of megabytes to
include them all.

(Hmm, we could include localdef in the bundle, and check LANG in runshell
and compile the locale directories on the fly. This would need
/usr/share/i18n/ and /usr/lib/locale-archive to be included in the bundle.
It's.. doable.)

I know this is going to once again cause users of the bundle to complain
that eg, ls doesn't show their unicode filenames right. Better than strange
crashes though.
2016-10-04 12:53:09 -04:00
Joey Hess
5bf4623a1d
allow multiple concurrent external special remote processes
Multiple external special remote processes for the same remote will be
started as needed when using -J.

This should not beak any existing external special remotes, because running
multiple git-annex commands at the same time could already start multiple
processes for the same external special remotes.
2016-09-30 14:29:02 -04:00
Joey Hess
28c6209f55
Make --json-progress output be shown even when the size of a object is not known. 2016-09-29 16:59:48 -04:00
Joey Hess
161d891508
Add "total-size" field to --json-progress output. 2016-09-29 16:29:54 -04:00
Joey Hess
7cae6c746c
Optimised git-annex branch log file timestamp parsing. 10% speedup
This sped up git annex find --not --in web from 6.64s to 5.69s.
The optimised parser is probably more like 50% faster than the general one
it replaced.
2016-09-29 14:04:53 -04:00
Joey Hess
1cd02762bf
Optimisations to git-annex branch query and setting, avoiding repeated copies of the environment.
Speeds up commands like  "git-annex find --in remote" by over 50%.

Profiling showed that adjustGitEnv was 21% of the time and 37% of the
allocations of that command. It copied the environment each time with
getEnvironment.

The only repeated use of adjustGitEnv is in withIndexFile, which tends to
be run at least once per file. So, it was optimised by keeping a cache of
the environment, which can be reused.

There could be other better ways to optimise this. Maybe get the while
environment once at startup. But, then it would have to be serialized back
out each time running a child process, so I doubt that would be a net win.

It might be better to cache a version of the environment that is
pre-modified to use .git-annex/index. But, profiling doesn't show that
modifying the enviroment is taking any significant time.
2016-09-29 13:36:48 -04:00
Joey Hess
8794dcf27b
Optimisations to time it takes git-annex to walk working tree and find files to work on. Sped up by around 18%.
key2file and file2key were top cost centers according to profiling.
The repeated use of replace was not efficient. This new approach is quite a
lot more efficient.

This commit was sponsored by Denis Dzyubenko on Patreon.
2016-09-26 16:48:57 -04:00
Joey Hess
1678510680
prep release 2016-09-23 09:45:46 -04:00
Joey Hess
4b26aee92c
Revert "stack.yaml: Update to lts-7.0 (ghc 8)"
This reverts commit e181603103.

This broke the i386ancient autobuilder due to its use of
--flag git-annex:XMPP --flag=git-annex:dbus

-- Failure when adding dependencies:
fdo-notify: needed ((>=0.3)), stack configuration has no specified version
(latest applicable is 0.3.1)
gnutls: needed ((>=0.1.4)), stack configuration has no specified version
(latest applicable is 0.2)
network-protocol-xmpp: needed (-any), stack configuration has no specified
version (latest applicable is 0.4.8)

OSX autobuilder also seems hosed by it, so too soon.

De-revert later..
2016-09-21 18:01:23 -04:00
Joey Hess
c910004d50
addurl, importfeed: Improve behavior when file being added is gitignored. 2016-09-21 17:21:48 -04:00
Joey Hess
a569f195b7
fix bugs in handing of deep branches with sync and adjusted branches
* sync: Previously, when run in a branch with a slash in its name,
  such as "foo/bar", the sync branch was "synced/bar". That conflicted
  with the sync branch used for branch "bar", so has been changed to
  "synced/foo/bar".
* adjust: Previously, when adjusting a branch with a slash in its name,
  such as "foo/bar", the adjusted branch was "adjusted/bar(unlocked)".
  That conflicted with the adjusted branch used for branch "bar",
  so has been changed to "adjusted/foo/bar(unlocked)"
* Also, running sync in an adjusted branch did not correctly sync
  changes back to the parent branch when it had a slash in its name.
  This bug has been fixed.

Eliminate use of Git.Ref.under and Git.Ref.basename; using
Git.Ref.underBase and Git.Ref.base make everything handle deep branches
correctly.

Probably noone was adjusting deep branches, and v6 is still experimental
anyway, so I'm not going to worry about the mess that was left by that bug.

In the case of git-annex sync, using a fixed git-annex with an old unfixed
one will mean they use different sync branches for a deep branch, and so
they may stop syncing until the old one is upgraded. However, that's only
a problem when syncing between repositories without going via a central
bare repository. Added a warning about this to the CHANGELOG, but it's
probably not going to affect many people at all.

This commit was sponsored by Riku Voipio.
2016-09-21 15:23:47 -04:00
Joey Hess
0e30e71e9c
info: Support being passed a treeish, and show info about the annexed files in it similar to how a directory is handled. 2016-09-15 12:51:00 -04:00
Joey Hess
e181603103
stack.yaml: Update to lts-7.0 (ghc 8)
A few of these extra-deps are setting versions to work around various
library dep issues with ghc 8.
2016-09-15 00:37:05 -04:00
Joey Hess
ec3558fb79
Improve gpg secret key list parser to deal with changes in gpg 2.1.15. Fixes key name display in webapp.
gpg 2.1.15 (or so) seems to have added some new fields to the --with-colons
--list-secret-keys output. These include "fpr" and "grp", and come before
the "uid" line. So, the parser was giving up before it saw the name. Fix by
continuing to look for the uid line until the next "sec" line.

This commit was sponsored by Ole-Morten,Duesund on Patreon.
2016-09-14 13:31:00 -04:00
Joey Hess
3e22d60549
copy, move, mirror: Support --json and --json-progress. 2016-09-09 16:24:26 -04:00
Joey Hess
05d4438383
addurl, get: Added --json-progress option, which adds progress objects to the json output.
This doesn't work right when used with -J yet, and there is some really
ugly hand-crafting of part of the json output.
2016-09-09 15:06:54 -04:00
Joey Hess
f421a7f001
Remove key:null from git-annex add --json output. 2016-09-09 14:26:34 -04:00
Joey Hess
089c592977
buffer json output until done when in concurrent mode 2016-09-09 13:21:38 -04:00
Joey Hess
e0fae28c72
Rate limit console progress display updates to 10 per second. Was updating as frequently as changes were reported, up to hundreds of times per second, which used unncessary bandwidth when running git-annex over ssh etc. 2016-09-08 13:17:43 -04:00
Joey Hess
ad0a7f6cb3
prep release 2016-09-07 11:12:33 -04:00
Joey Hess
31289da691
get -J: Download different files from different remotes when the remotes have the same costs.
Only done in -J mode because only if there's concurrency can downloading
from two remotes be faster. Without concurrency, it's likely the case that
sequential downloads from the same remote are faster than switching back
and forth between two remotes.

There is some hairy MVar code here, but basically it just keeps
the activeremotes MVar full except when deciding which remote to assign
to a thread.

Also affects gets by sync --content -J

This commit was sponsored by Jochen Bartl.
2016-09-06 12:45:21 -04:00
Joey Hess
dd0dff9dc4
Assistant, repair: Filter out git fsck lines about duplicate file entries in tree objects. 2016-09-05 16:08:49 -04:00
Joey Hess
219e2fa157
Make --json and --quiet suppress automatic init messages
And any other messages that might be output before a command starts.

Fixes a reversion introduced in version 5.20150727.

During the optparse-applicative conversion, I needed a place to run
per-command global option setters, and I made it get run during the seek stage. But
that is too late to have --json and --quiet disable output produced in the
check stage. Fix is just to run those per-command global option setters at
the same time as the all-command global option setters.

This commit was sponsored by Thom May.
2016-09-05 15:34:38 -04:00
Joey Hess
49b3ef88f7
Android: Fix disabling use of cp --reflink=auto, curl, sha224, and sha384.
This was originally done in a7ef05a9, but got lost in some change to the
Makefile. Use CROSS_COMPILE=Android to tell configure that it's configuring
for android instead of passing it a parameter.
2016-09-05 14:11:35 -04:00
Joey Hess
5d70eaacaf
examimekey: Allow being run in a git repo that is not initialized by git-annex yet.
No reason not to; indeed there's no real reason to need a git repository
at all except the implementation uses the Annex monad.
2016-09-05 12:26:59 -04:00
Joey Hess
f1a9c5f248
Fix formatting of git-annex-smudge man page, and improve mdwn2man. Thanks, Jim Paris. 2016-09-05 12:16:03 -04:00
Joey Hess
f292f78366
Windows: Handle shebang in external special remote program. 2016-09-05 12:09:23 -04:00
Joey Hess
3752426ca1
releasing package git-annex version 6.20160808 2016-08-08 11:57:09 -04:00
Joey Hess
f461bcae4b
Re-enable accumulating transfer failure log files for command-line actions
This was disabled in commit 61ccf95004,
because only the assistant used them, and they were clutter. But, now
--failed also uses them.

Remove the failure log files after successful transfers. Should avoid
most of the clutter problems.

Commit 61ccf95004 mentions a subtle behavior
change, which has now been reverted:

    There is one behavior change from this. If glacier is being used, and a
    manual git annex get --from glacier fails because the file isn't available
    yet, the assistant will no longer later see that failed transfer file and
    retry the get.
2016-08-03 13:41:07 -04:00
Joey Hess
1a0e2c9901
get, move, copy, mirror: Added --failed switch which retries failed copies/moves
Note that get --from foo --failed will get things that a previous get --from bar
tried and failed to get, etc. I considered making --failed only retry
transfers from the same remote, but it was easier, and seems more useful,
to not have the same remote requirement.

Noisy due to some refactoring into Types/
2016-08-03 12:37:12 -04:00
Joey Hess
f0886a1bdd
info: When run on a file now includes an indication of whether the content is present locally. 2016-07-30 12:29:59 -04:00
Joey Hess
bf3327ff25
Added metadata --batch option, which allows getting, setting, deleting, and modifying metadata for multiple files/keys. 2016-07-27 10:46:25 -04:00
Joey Hess
e5225f08fc
When built with ut uid-1.3.12, generate more random UUIDs than before
Use nextRandom to generate the random UUID, rather than using randomIO.
This gets fixes for the following two bugs in the uuid library.

However, this did not impact git-annex much, so a hard depedency has
not been added on uuid-1.3.12.

https://github.com/aslatter/uuid/issues/15
	"v4 UUIDs are not that random"

	This doesn't greatly affect git-annex, because even with only
	2^64 possible UUIDs, the chance that two git-annex repositories
	that are clones of the same git repo get the same UUID is miniscule.

	And, git-annex generates only one UUID per run, so preducting
	subsequent UUIDs is not a problem.

https://github.com/aslatter/uuid/issues/16
	"Remove Random instance for UUID, or mark it as deprecated"

	git-annex was using that instance; let's stop before it gets
	deprecated or removed.
2016-07-27 07:46:08 -04:00
Joey Hess
870873bdaa
Removed dependency on json library; all JSON is now handled by aeson.
I've eyeballed all --json commands, and the only difference should be
that some fields are re-ordered.
2016-07-26 19:15:34 -04:00
Joey Hess
8bc8469c38
saner format for metadata --json
metadata --json output format has changed, adding a inner json object
named "fields" which contains only the fields and their values.

This should be easier to parse than the old format, which mixed up
metadata fields with other keys in the json object.

Any consumers of the old format will need to be updated.

This adds a dependency on unordered-containers for parsing MetaData
from JSON, but it's a free dependency; aeson pulls in that library.
2016-07-26 15:41:04 -04:00
Joey Hess
d344f04d09
cabal constraints for aws and esqueleto
closes https://github.com/joeyh/git-annex/pull/55

* git-annex.cabal: Temporarily limit to http-conduit <2.2.0
  since aws 0.14.0 is not compatible with the newer version.
* git-annex.cabal: Temporarily limit to persistent <2.5
  since esqueleto 2.4.3 is not compatible with the newer version.
2016-07-22 12:41:28 -04:00
Joey Hess
bf8bf14e8e
--branch, stage 1
Added --branch option to copy, drop, fsck, get, metadata, mirror, move, and
whereis commands. This option makes git-annex operate on files that are
included in a specified branch (or other treeish).

The names of the files from the branch that are being operated on are not
displayed yet; only the keys. Displaying the filenames will need changes
to every affected command.

Also, note that --branch can be specified repeatedly. This is not really
documented, but seemed worth supporting, especially since we may later want
the ability to operate on all branches matching a refspec. However, when
operating on two branches that contain the same key, that key will be
operated on twice.
2016-07-20 12:05:26 -04:00
Joey Hess
2cbd1afdb6
prep release 2016-07-19 14:18:16 -04:00
Joey Hess
2619019630
Avoid any access to keys database in v5 mode repositories, which are not supposed to use that database. 2016-07-19 12:12:19 -04:00
Joey Hess
50e63f75d1
webapp: Escape unusual characters in ssh hostnames when generating mangled hostnames. This allows IPv6 addresses to be used on filesystems not supporting : in filenames. 2016-07-19 11:37:03 -04:00
Joey Hess
c4d011bf3e
log: Added --all option. 2016-07-17 15:15:08 -04:00
Joey Hess
154c939830
Speed up startup time by caching the refs that have been merged into the git-annex branch.
This can speed up git-annex commands by as much as a second, depending on
the number of remotes.
2016-07-17 12:24:34 -04:00
Joey Hess
79704528c0
Support checking presence of content at a http url that redirects to a ftp url. 2016-07-12 16:41:45 -04:00
Joey Hess
0c713a94bd
uninit: Fix crash due to trying to write to deleted keys db.
Reversion introduced by v6 mode support, affects v5 too.

Also fix a similar crash when the webapp is used to delete a repository.
2016-07-12 14:18:35 -04:00
Joey Hess
5642daa651
fsck: Fix a reversion in direct mode fsck of a file that is present when the location log thinks it is not. Reversion introduced in version 5.20151208. 2016-07-12 13:41:03 -04:00
Joey Hess
ea23660f9d
typo: s/enabled/disabled/ 2016-07-06 15:10:57 -04:00
Joey Hess
8b36d54319
Remove the EKG build flag, since Gentoo for some reason decided to enable this flag, depsite it not being intended for production use and so enabled by default. 2016-07-06 15:09:56 -04:00
Joey Hess
c4229be9a7
Remove unnecessary rpaths in the git-annex binary, but only when it's built using make, not cabal. This speeds up git-annex statup time by around 50%. 2016-07-06 14:40:18 -04:00
Joey Hess
5171e98988
drop: Add --batch and --json options. 2016-07-06 11:56:11 -04:00
Joey Hess
d6483deeb1
testremote: Fix crash when testing a freshly made external special remote.
Ignore exceptions when getting the cost and availability for the remote,
and return sane defaults. These defaults are not cached, so if a special
remote program has a transient problem, it will re-query it later.
2016-07-05 16:34:39 -04:00
Joey Hess
f3f6dfcf35
New url for git-remote-gcrypt, now maintained by spwhitton. 2016-07-05 11:30:58 -04:00
Joey Hess
ed8ecbea0c
get: Add --batch and --json options. 2016-07-05 08:57:45 -04:00
Joey Hess
486c355cc1
merged patch
closes https://github.com/joeyh/git-annex/pull/54
2016-06-13 21:53:43 -04:00
Joey Hess
de395dc48c
prep release 2016-06-13 14:57:52 -04:00
Joey Hess
bfd00a0f8c
v6: Fix bad merge in an adjusted branch that resulted in an empty tree. 2016-06-13 14:18:22 -04:00
Joey Hess
b146e13bff
highlight v6 changes 2016-06-09 15:17:54 -04:00
Joey Hess
b6b5a11601
Make git clean filter preserve the backend that was used for a file. 2016-06-09 15:17:08 -04:00
Joey Hess
7fe2ecff91
Fix update of associated files db when unlocking a file in a v6 repo. 2016-06-09 14:45:00 -04:00
Joey Hess
0bc7fee660
Make lock and unlock work in v6 repos on files whose content is not present. 2016-06-09 14:40:44 -04:00
Joey Hess
0249f3aff5
Fix bug in initialization of clone from a repo with an adjusted branch that had not been synced back to master.
This bug caused broken tree objects to get built by a later git annex sync.

This is a somewhat unlikely but not impossible situation, and the test
suite's union_merge_regression test tickled it when it was run on FAT.
2016-06-09 14:11:00 -04:00
Joey Hess
d62d81ee1c
Avoid a crash if getpwuid does not work, when querying the user's full name. 2016-06-08 13:48:03 -04:00
Joey Hess
9569d6be63
Fix bad automatic merge conflict resolution between an annexed file and a directory with the same name when in an adjusted branch.
When running in an overlay work tree, all unchanged files show as deleted,
so this code that stages deletions should not run.
2016-06-07 12:53:35 -04:00
Joey Hess
74e01a2d01
move --to: Better behavior when system is completely out of disk space; drop content from disk before writing location log.
I noticed move --to failing when there was no disk space. The file was sent
to the remote, but it crashed before it could be dropped locally. This
could fix that.
2016-06-05 13:51:22 -04:00
Joey Hess
9996e04f41
list: Do not include dead repositories. 2016-06-04 14:33:31 -04:00
Joey Hess
907fc62f2c
Fix initialization of a bare clone of a repo that has an adjusted branch checked out. 2016-06-02 17:02:38 -04:00
Joey Hess
8452ea45ca
remotedaemon: Fixed support for notifications of changes to gcrypt remotes, which was never tested and didn't quite work before. 2016-06-02 16:19:31 -04:00
Joey Hess
1dcfd797fa
fix git version 2016-06-02 15:55:11 -04:00
Joey Hess
72f0d3d384
Automatically enable v6 mode when initializing in a clone from a repo that has an adjusted branch checked out.
The clone also has the adjusted branch checked out, so it needs to be
initialized to a version that supports that.
2016-06-02 15:34:30 -04:00
Joey Hess
02a20288ef
Pass -S to git commit-tree when commit.gpgsign is set and when making a non-automatic commit, in order to preserve current behavior when used with git 1.9, which has stopped doing this itself. 2016-06-02 15:07:20 -04:00
Joey Hess
fbf5045d4f
sync --content: Fix bug that caused transfers of files to be made to a git remote that does not have a UUID. This particularly impacted clones from gcrypt repositories.
Added guard in Annex.Transfer to prevent this problem at a deeper level.

I'm unhappy ith NoUUID, but having Maybe UUID instead wouldn't help either
if nothing checked that there was a UUID. Since there legitimately need to
be Remotes that do not have a UUID, I can't see a way to fix it at the type
level, short making there be two separate types of Remotes.
2016-06-02 13:50:43 -04:00
Yaroslav Halchenko
64e844e1fe
minor typo fixes throughout
problematic
flexibility
2016-06-02 11:22:18 -04:00
Joey Hess
f4489cc415
Remove Makefile from cabal tarball; man page building is now handled by a small haskell program.
This actually runs faster than building the man pages from the makefile
did. But the main purpose is to let Setup.hs import Build.Mans and so not
need the makefile.
2016-05-31 13:58:13 -04:00
Joey Hess
84f20c9f69
Windows: Avoid terminating git-annex branch lines with \r\n when union merging. 2016-05-27 15:22:52 -04:00
Joey Hess
45308ec78b
Improve SHA*E extension extraction code.
Filter out over-long "extensions" before stripping out non-alphanumerics
from them, so that eg "foo.ba__________r" is not considered a .bar
extension.
2016-05-27 13:14:51 -04:00
Joey Hess
f21a425791
releasing package git-annex version 6.20160527 2016-05-27 12:35:18 -04:00
Joey Hess
5418c8a23a
prep release 2016-05-27 11:50:27 -04:00
Joey Hess
eba68572dc
Split lines in the git-annex branch on \r as well as \n, to deal with \r\n terminated lines written by some versions of git-annex on Windows.
This fixes strange displays in some cases, including whereis showing
many duplicate locations, and showing more total copies than actually
exist.

It's unknown if that lead to data loss when eg, dropping. At the moment,
it seems unlikely it could, since the UUID with \r's appended is not the
same as a UUID without, and so no remote matches it.

It's also unknown if \r's can leak in on windows, perhaps when merging the
git-annex branch.
2016-05-27 11:45:13 -04:00
Joey Hess
1b3bde0625
enableremote: Remove annex-ignore configuration from a remote. 2016-05-24 15:58:27 -04:00
Joey Hess
b33a649a25
enableremote: Can now be used to explicitly enable git-annex to use git remotes. Using the command this way prevents other git-annex commands from probing new git remotes to auto-enable them. 2016-05-24 15:24:38 -04:00
Joey Hess
f79875ef3b
Updated cabal file explictly lists source files.
The tarball on hackage will include only the files needed for cabal install;
it is NOT the full git-annex source tree. While it's totally obnoxious that
cabal files need every file listed out when basic wildcard support could
avoid hundreds of lines, and have to be maintained when files are added,
this does get the tarball size back down to 1 mb.

This also stops stack from complaining that it found modules not listed in
the cabal file.

debian/changelog, debian/NEWS, debian/copyright: Converted to symlinks
to CHANGELOG, NEWS, and COPYRIGHT, which used to symlink to these instead.
This avoids needing to include debian/ in the hackage tarball.

Setup.hs: Build man pages at install time using make and mdwn2man.
If it fails, which it probably will on windows, just skip installing
them.
2016-05-24 01:28:07 -04:00
Joey Hess
d47fb4c11e symlinks 2010-10-27 15:14:59 -04:00