Commit graph

842 commits

Author SHA1 Message Date
Joey Hess
3adc251f9d
Build with silently-1.2.5.1 on Windows; the old one used "NUL" which is not supported with recent versions of ghc. 2019-08-07 17:42:16 -04:00
Joey Hess
c527ae5887
Merge branch 'master' into git-lfs 2019-08-05 11:48:45 -04:00
Joey Hess
1cef791cf3
skeleton git-lfs special remote
This is a special remote and a git remote at the same time; git can pull
and push to it and git-annex can use it as a special remote.

Remote.Git has to check if it's configured as a git-lfs special remote
and sets it up as one if so.

Object methods not implemented yet.
2019-08-01 15:30:12 -04:00
Joey Hess
b509f6f73d
releasing package git-annex version 7.20190730 2019-07-30 16:21:26 -04:00
Joey Hess
426053cb6c
Corrected some license statements
In 40ecf58d4b I changed the license of code I
wrote from GPL to AGPL. But, two files containing code I wrote combined
with code by others were updated to say their license is AGPL, while in
fact part of it was (the code I wrote) but part remained under the original
license (the code written by others).

Remote/Ddar.hs is now changed entirely back to GPL 3.

Annex/DirHashes.hs stays AGPL, but I broke out Utility/MD5.hs with the code
not written by me, and corrected its license statement to GPL-2, which
is the actual version of the GPL included with the code in its original
distribution at http://www.cs.ox.ac.uk/people/ian.lynagh/md5/
2019-07-28 14:27:33 -04:00
Joey Hess
83997ebf08
should not have moved Utility.LockPool.STM
used on windows after all
2019-07-22 09:25:08 -04:00
Joey Hess
8d7abb3978
move more non-windows modules 2019-07-22 09:21:41 -04:00
Joey Hess
224f095b7e
move import to non-windows section
New stack builds all listed modules so it tried and failed to build
this on windows.

This commit was sponsored by Trenton Cronholm on Patreon.
2019-07-22 09:08:05 -04:00
Joey Hess
5238610a05
Merge branch 'post-debian-stable-release' 2019-07-08 08:59:43 -04:00
Joey Hess
843b091093
releasing package git-annex version 7.20190708 2019-07-08 08:58:44 -04:00
Joey Hess
9a5ddda511
remove many old version ifdefs
Drop support for building with ghc older than 8.4.4, and with older
versions of serveral haskell libraries than will be included in Debian 10.

The only remaining version ifdefs in the entire code base are now a couple
for aws!

This commit should only be merged after the Debian 10 release.
And perhaps it will need to wait longer than that; it would make
backporting new versions of  git-annex to Debian 9 (stretch) which
has been actively happening as recently as this year.

This commit was sponsored by Ilya Shlyakhter.
2019-07-05 15:09:37 -04:00
Joey Hess
23f09790b6
releasing package git-annex version 7.20190626 2019-06-26 12:30:03 -04:00
Joey Hess
554b307931
update progress meter while hashing files
The hash was actually not being fully evaluated before, used rnf to fix
that.

The added dependency on deepseq is a free dependency, because eg text
depends on it.
2019-06-25 13:10:06 -04:00
Joey Hess
0bd9e8c0e2
releasing package git-annex version 7.20190615 2019-06-15 12:39:16 -04:00
Joey Hess
c04b2af3e1
improved WorkerPool abstraction
No behavior changes.
2019-06-05 14:26:48 -04:00
Joey Hess
6eaa0af42f
releasing package git-annex version 7.20190507 2019-05-07 13:05:52 -04:00
Joey Hess
4da50456a3
releasing package git-annex version 7.20190503 2019-05-03 12:48:28 -04:00
Joey Hess
700a3f2787
Merge branch 'master' into import-from-s3 2019-05-01 14:30:52 -04:00
Joey Hess
9dd764e6f7
Added mimeencoding= term to annex.largefiles expressions.
* Added mimeencoding= term to annex.largefiles expressions.
  This is probably mostly useful to match non-text files with eg
  "mimeencoding=binary"
* git-annex matchexpression: Added --mimeencoding option.
2019-04-30 12:17:22 -04:00
Joey Hess
b9b3567747
added Git.History 2019-04-24 14:55:49 -04:00
Joey Hess
9dc7a10448
Drop support for building with aws older than 0.14.
debian stable has 0.14 so lose the complexity for old versions
2019-04-19 14:27:59 -04:00
Joey Hess
c0c38e986d
added renameremote command 2019-04-15 13:49:03 -04:00
Joey Hess
2a99d7ffc0
improve error message 2019-03-22 12:23:59 -04:00
Joey Hess
519cadd1de
refactor RemoteTrackingBranch
Not specific to Import; export will use it too.
2019-03-01 14:47:56 -04:00
Joey Hess
8fdea8f444
WIP
Added graftTree but it's buggy.

Should use graftTree in Annex.Branch.graftTreeish; it will be faster
than the current implementation there.

Started Annex.Import, but untested and it doesn't yet handle tree
grafting.
2019-02-21 17:32:59 -04:00
Joey Hess
fd304dce60
split out Types.Import and some changes to the types in it 2019-02-21 13:39:09 -04:00
Joey Hess
5a294f0dd7
add Logs.ContentIdentifier 2019-02-20 17:22:56 -04:00
Joey Hess
a818bc5e73
add Database.ContentIdentifier
Does not yet have a way to update with new information from the
git-annex branch, which will be needed when multiple repos are importing
from the same remote.
2019-02-20 16:59:10 -04:00
Joey Hess
ccc0684d21
no remotes support import yet 2019-02-20 16:59:04 -04:00
Joey Hess
e8bfc3640b
storing ContentIdentifier in the git-annex branch 2019-02-20 15:40:07 -04:00
Joey Hess
f47ee98337
releasing package git-annex version 7.20190219 2019-02-19 12:19:53 -04:00
Joey Hess
b9a1db8068
update copyright metadata for recent changes
List all current AGPL files in COPYRIGHT; several that were GPL have had
new AGPL code added.

In git-annex.cabal, use AGPL-3 as the overall license, since it's not
possible to build git-annex without AGPL code anymore.
2019-02-08 15:19:11 -04:00
Joey Hess
3fa6be1fef
Added NetworkBSD build flag to deal with Network.BSD moving to a new package.
Like with the network-uri split, cabal will automatically turn off the flag
when building with an old network.

I have not tested building with the new network-3.0.0.0 yet; several
other dependencies including aws are still pinned on network-2.*
2019-02-08 13:36:39 -04:00
Joey Hess
4cf7deb57e
releasing package git-annex version 7.20190129 2019-01-29 15:21:44 -04:00
Joey Hess
467c3b393d
refactor magic 2019-01-23 12:40:59 -04:00
Joey Hess
f918e8798f
releasing package git-annex version 7.20190122 2019-01-22 12:28:14 -04:00
Joey Hess
9a4406e5e7
webapp: remove configurators for obsolste cloud storage services
* webapp: Remove configurator for box.com repository, since their
  webdav support is going away at the end of this January.
* webapp: Remove configurator for gitlab, which stopped supporting git-annex
  some time ago.

This commit was sponsored by Brock Spratlen on Patreon.
2019-01-22 11:48:35 -04:00
Joey Hess
d5f2463702
misctmp cleanup
* Switch to using .git/annex/othertmp for tmp files other than partial
  downloads, and make stale files left in that directory when git-annex
  is interrupted be cleaned up promptly by subsequent git-annex processes.
* The .git/annex/misctmp directory is no longer used and git-annex will
  delete anything lingering in there after it's 1 week old.

Also, in Annex.Ingest, made the filename it uses in the tmp dir be
prefixed with "ingest-" to avoid potentially using a filename used by
some other code.
2019-01-17 16:02:22 -04:00
Joey Hess
5d98cba923
use ByteStrings when reading annex symlinks and pointers
Now there's a ByteString used all the way from disk to Key.

The main complication in this conversion was the use of fromInternalGitPath
in several places to munge things on Windows. The things that used that
were changed to parse the ByteString using either path separator.

Also some code that had read from files to a String lazily was changed
to read a minimal strict ByteString.
2019-01-14 15:37:08 -04:00
Joey Hess
5ba14b5095
build cleanrly when benchmark flag is not enabled 2019-01-05 08:09:28 -04:00
Joey Hess
11d6e2e260
new improved benchmark command that can benchmark anything git-annex does 2019-01-04 13:46:36 -04:00
Joey Hess
b781fbcccf
update copyright year 2019-01-01 15:37:40 -04:00
Joey Hess
426bdbf113
releasing package git-annex version 7.20181211 2018-12-11 16:33:30 -04:00
Joey Hess
1d16605f93
releasing package git-annex version 7.20181205 2018-12-05 16:19:11 -04:00
Joey Hess
f81eaaf411
releasing package git-annex version 7.20181121 2018-11-21 14:24:04 -04:00
Joey Hess
f62114e5ad
Merge branch 'remove-esqueleto' 2018-11-20 11:50:04 -04:00
Joey Hess
de26cfbf89
Revert "depend on newer concurrent-output to fix crash"
This reverts commit 4511457382.

Not needed, 872af2b2f1 avoids the
underlying bug in concurrent-output.
2018-11-19 18:41:34 -04:00
Joey Hess
4511457382
depend on newer concurrent-output to fix crash
At least temporarily.. It may cause too much breakage to build
environments to keep this change yet.
2018-11-19 17:47:33 -04:00
Joey Hess
9127fe4821
add DebugLocks build flag
Using the method described in
https://www.fpcomplete.com/blog/2018/05/pinpointing-deadlocks-in-haskell
but my own code to implement it, and with callstacks added.

This work is supported by the NIH-funded NICEMAN (ReproNim TR&D3) project.
2018-11-19 15:02:43 -04:00
Sean Parsons
42bdc9fa2f Removed Esqueleto as a dependency. 2018-11-06 22:18:55 +00:00
Joey Hess
3016e94dbb
releasing package git-annex version 7.20181105 2018-11-05 13:33:36 -04:00
Joey Hess
2ca408dc33
Increase minimum QuickCheck version. 2018-10-31 15:53:22 -04:00
Joey Hess
8f9278787f
releasing package git-annex version 7.20181031 2018-10-31 15:46:57 -04:00
Joey Hess
3963c5fcf5
better approach to enabling WAL mode
The old approach opened the database an extra time to enable WAL mode,
but more recent persistent-sqlite has a better API to enable it.
2018-10-30 13:47:38 -04:00
Joey Hess
c75807ba3a
remove note about ghc bug
ghc 8.6 fixed that, apparently
2018-10-30 00:51:14 -04:00
Joey Hess
2e9f128dea
moved module and relicensed 2018-10-29 23:13:36 -04:00
Joey Hess
5d97898a7c
touch files with high-resolution timestamp
Needs unix 2.7.2, but that was included in ghc 8.0.1 (and much older)
so not really a new dep.
2018-10-29 22:25:21 -04:00
Joey Hess
94b7968f1f
forgot to remove this when dropping support for old ghc 2018-10-29 22:01:06 -04:00
Joey Hess
234842a347
v7
Install new git hooks in this version.

This does beg the question of what to do if git later gets eg a
post-smudge hook, that could run git-annex smudge --update. I think the
thing to do in that case would be to make git-annex smudge --update
install the new hooks. That way, as the user uses git-annex, the hook
would be created pretty quickly and without needing any extra syscalls
except for when git-annex smudge --update is called.

I considered doing something like that for installation of the
post-checkout and post-merge hooks, which would have avoided the need
for v7. But the only place it was cheap to do it would be in git-annex smudge
which could cheaply notice that smudge.log didn't exist yet and so know
the hooks needed to be installed. But since smudge used to populate pointer
files, it would be quite surprising if a single git checkout/merge failed
to update the work tree, and so that idea didn't work out.

The other reason for v7 is psychological -- users don't need to worry
about whether they might be running an old version of git-annex that
doesn't support their v7 repository very well. And bug reports about
"v6" have gotten a bit of a bad association in my head since they often
hit one of the known limitations and didn't realize it was experimental.

newtyped RepoVersion Int to avoid needing 2 comparisons in
versionSupportsUnlockedPointers etc. Also it's just nicer.

This commit was sponsored by John Pellman on Patreon.
2018-10-25 18:24:23 -04:00
Joey Hess
917a2c6095
defer updating unlocked files until after smudge filter
The smuge filter no longer provides git with annexed file content, to
avoid a git memory leak, and because that did not honor annex.thin.

git annex smudge --update has to be run after a checkout to update
unlocked files in the working tree with annexed file contents.

No hooks yet to run it.

This commit was sponsored by Nick Piper on Patreon.
2018-10-25 15:08:20 -04:00
Joey Hess
8be5a7269a
refactor getCurrentBranch
Both Command.Sync and Annex.Ingest had their own versions of this.

The one in Annex.Ingest used Git.Branch.currentUnsafe, but does not seem
to need it. That is only checking to see if it's in an adjusted unlocked
branch, and when in an adjusted branch, the branch does in fact exist,
so the added check that Git.Branch.current does is fine.

This commit was sponsored by Denis Dzyubenko on Patreon.
2018-10-19 17:29:18 -04:00
Joey Hess
38d691a10f
removed the old Android app
Running git-annex linux builds in termux seems to work well enough that the
only reason to keep the Android app would be to support Android 4-5, which
the old Android app supported, and which I don't know if the termux method
works on (although I see no reason why it would not).
According to [1], Android 4-5 remains on around 29% of devices, down from
51% one year ago.

[1] https://www.statista.com/statistics/271774/share-of-android-platforms-on-mobile-devices-with-android-os/

This is a rather large commit, but mostly very straightfoward removal of
android ifdefs and patches and associated cruft.

Also, removed support for building with very old ghc < 8.0.1, and with
yesod < 1.4.3, and without concurrent-output, which were only being used
by the cross build.

Some documentation specific to the Android app (screenshots etc) needs
to be updated still.

This commit was sponsored by Brett Eisenberg on Patreon.
2018-10-13 01:41:11 -04:00
Joey Hess
426f0f3f4b
releasing package git-annex version 6.20181011 2018-10-11 13:50:53 -04:00
Joey Hess
012d67c3eb
releasing package git-annex version 6.20180926 2018-09-26 13:16:54 -04:00
Joey Hess
547d01fd0e
releasing package git-annex version 6.20180913 2018-09-13 15:50:50 -04:00
Joey Hess
0a7c5a9982
dropdead per-remote metadata
Had to refactor pure code into separate modules so it is accessible
inside Annex.Branch.Transitions.

This commit was sponsored by Peter on Patreon.
2018-09-05 13:52:46 -04:00
Joey Hess
4ddce51a52
move Utility.OSX
stack complains when a module whose import is hidden behind a
ifdef os is not listed when building for other os's.
2018-09-05 11:55:08 -04:00
Joey Hess
69907e397f
revert a few problem areas of git-annex.cabal patch 2018-09-05 11:47:00 -04:00
fftmp
5f8f83b884
optional build assistant and other small cabal refinings 2018-09-05 11:42:30 -04:00
Joey Hess
55f8d90dee
remove Utlity.SRV, no longer used 2018-09-05 11:15:33 -04:00
Joey Hess
c565340adc
stop using external hash programs, since cryptonite is faster
In 2013, I wrote "Cryptohash benchmarks 90 to 101% faster than external
hashers". Re-benchmarking today, I found cryptonite's sha256 consistently
outperformed coreutils by 10% for large files. Tested 10 mb, 100 mb, 1 gb
files with both sha256 and sha512. And for smaller files, the external
process startup time swamps the hash time.

Perhaps cryptonite has improved. Or it could just do better on my
current CPU Intel(R) Pentium(R) CPU 4410Y @ 1.50GHz). Anyway, even if cryptonite
is slower in some situations, seems likely it would only be marginally slower;
it's got the same class of highly optimised C code under the hood as coreutils.
The main difference between the two sha256 implementations seems to be
how much of the inner loop they unroll..

This commit was sponsored by Henrik Riomar on Patreon.
2018-08-28 18:10:58 -04:00
Joey Hess
401a79675b
run git status before enabling clean filter
Avoids annex.largefiles inconsitency and also avoids a lot of
unneccessary calls to the clean filter when a large repo's clone
is being initialized.

This commit was supported by the NSF-funded DataLad project.
2018-08-28 10:36:22 -04:00
Joey Hess
e094cf3377
split out modules from Annex.Content 2018-08-22 14:45:53 -04:00
Joey Hess
42c5d7c64f
moving to filterdriver branch
Not used in master, so remove until/unless filterdriver branch is
merged.
2018-08-14 13:37:17 -04:00
Joey Hess
fd42df78a0
git long-running process handshake implementation
This commit was supported by the NSF-funded DataLad project.
2018-08-10 16:03:04 -04:00
Joey Hess
1272ccdf1e
git pkt-line format
Git uses pkt-line in the pack and http protocols, and for the long-running
filter processes protocol as well.

This should be a quite efficient parser and builder since it uses
attoparsec and bytestring-builder.

This adds a dependency on attoparsec, but it's a free dependency because
eg aeson depends on attoparsec and git-annex depends on aeson.

This commit was supported by the NSF-funded DataLad project.
2018-08-10 14:12:33 -04:00
Joey Hess
2503cd63d0
prep release 2018-08-06 20:30:38 -04:00
Joey Hess
22ff136230
prep for release tomorrow 2018-07-18 14:45:44 -04:00
Joey Hess
841788cad4
add transformers to setup-depends
per Peter Simons:

Setup.hs depends on 'transformers' for versions of base
prior to 4.9.x so that Control.Monad.IO.Class can be included. Just
adding the library to 'setup-depends' fixes the build with older
compilers like GHC 7.10.3.
2018-07-01 13:08:40 -04:00
Joey Hess
14557a3ff6
git-annex.cabal: Fix network version.
Needed for hostAddressToTuple.

Which means the build flag for the network-uri split is no longer needed.
2018-07-01 13:07:24 -04:00
Joey Hess
57dc30a029
finalize release 2018-06-22 10:37:01 -04:00
Joey Hess
991265e724
version deps
need at least http-client-0.4.31 to build now, and connection-0.2.6
2018-06-19 19:55:22 -04:00
Joey Hess
014a3fef34
added isPrivateAddress and isLoopbackAddress
For use in a security boundary enforcement.

Based on https://en.wikipedia.org/wiki/Reserved_IP_addresses

Including supporting IPv4 addresses embedded in IPv6 addresses. Because
while RFC6052 3.1 says "Address translators MUST NOT translate packets
in which an address is composed of the Well-Known Prefix and a non-
global IPv4 address; they MUST drop these packets", I don't want to
trust that implementations get that right when enforcing a security
boundary.

This commit was sponsored by John Pellman on Patreon.
2018-06-17 13:28:25 -04:00
Joey Hess
40e8358284
add Utility.HttpManagerRestricted
This is a clean way to add IP address restrictions to http-client, and
any library using it.
See https://github.com/snoyberg/http-client/issues/354#issuecomment-397830259

Some code from http-client and http-client-tls was copied in and
modified. Credited its author accordingly, and used the same MIT license.

The restrictions don't apply to http proxies. If using http proxies is a
problem, http-client already has a way to disable them.
SOCKS support is not included. As far as I can tell, http-client-tls
does not support SOCKS by default, and so git-annex never has.

The additional dependencies are free; git-annex already transitively
depended on them via http-conduit.

This commit was sponsored by Eric Drechsel on Patreon.
2018-06-16 18:44:13 -04:00
Joey Hess
33834140e6
releasing package git-annex version 6.20180529 2018-05-29 13:06:56 -04:00
Joey Hess
0632c49c22
releasing package git-annex version 6.20180509 2018-05-09 16:20:43 -04:00
Joey Hess
f98251c97c
releasing package git-annex version 6.20180427 2018-04-27 12:37:01 -04:00
Joey Hess
9807e5bead
fix webapp opening in termux
Open real url not html shim since android and file:// urls is a nasty
kettle of fish.

This commit was sponsored by John Pellman on Patreon.
2018-04-25 14:38:42 -04:00
Joey Hess
89e1a05a8f
Fix mangling of --json output of utf-8 characters when not running in a utf-8 locale
As long as all code imports Utility.Aeson rather than Data.Aeson,
and no Strings that may contain utf-8 characters are used for eg, object
keys via T.pack, this is guaranteed to fix the problem everywhere that
git-annex generates json.

It's kind of annoying to need to wrap ToJSON with a ToJSON', especially
since every data type that has a ToJSON instance has to be ported over.
However, that only took 50 lines of code, which is worth it to ensure full
coverage. I initially tried an alternative approach of a newtype FileEncoded,
which had to be used everywhere a String was fed into aeson, and chasing
down all the sites would have been far too hard. Did consider creating an
intentionally overlapping instance ToJSON String, and letting ghc fail
to build anything that passed in a String, but am not sure that wouldn't
pollute some library that git-annex depends on that happens to use ToJSON
String internally.

This commit was supported by the NSF-funded DataLad project.
2018-04-16 16:21:21 -04:00
Joey Hess
ba8a3156ea
releasing package git-annex version 6.20180409 2018-04-09 13:24:45 -04:00
Joey Hess
0f6775f1ff
refactor sinkResponseFile and add downloadC
Remote.S3 and Remote.Helper.Http both had similar code to sink a
http-conduit Response to a file; refactor out sinkResponseFile.

downloadC downloads an url to a file using http-conduit, and supports
resuming. Falls back to curl to handle urls that http-conduit does not
support. This is not used yet, but the goal is to replace download with
it.

git-annex.cabal: conduit-extra was not actually used for a long time,
remove the dep. conduit moves into the main dependency list, but since
http-conduit was already in there, and it depends on conduit, that's not
really adding a new build dep.

This commit was supported by the NSF-funded DataLad project.
2018-04-06 16:07:08 -04:00
Joey Hess
2927618d35
Added adb special remote which allows exporting files to Android devices.
git annex testremote passes.

exportree not implemented yet, although the documentation talks about it,
since it will be the main way this remote will be used.

The adb push/pull progress is displayed for now; it would be better
to consume it and use it to update the git-annex progress bar.

This commit was sponsored by andrea rota.
2018-03-27 14:54:41 -04:00
Joey Hess
bc1d56bdfd
cabal sdist refuses to build with -O1
Sigh, disabled the full fix. What we have now will work once the ghc bug
is fixed, but not currently.
2018-03-16 12:56:28 -04:00
Joey Hess
14100f4f74
releasing package git-annex version 6.20180316 2018-03-16 12:40:27 -04:00
Joey Hess
521d4ede1e
fix build with cryptonite-0.20
Some blake hash varieties were not yet available in that version.
Rather than tracking exact details of what cryptonite supported when,
disable blake unless using a current cryptonite.
2018-03-15 11:16:00 -04:00
Joey Hess
050ada746f
Added backends for the BLAKE2 family of hashes.
There are a lot of different variants and sizes, I suppose we might as well
export all the common ones.

Bump dep to cryptonite to 0.16, earlier versions lacked BLAKE2 support.
Even android has 0.16 or newer.

On Debian, Blake2bp_512 is buggy, so I have omitted it for now.
http://bugs.debian.org/892855

This commit was sponsored by andrea rota.
2018-03-13 16:23:42 -04:00
Joey Hess
16af259209
refactor p2p remote action code
Make a Remote.Helper.P2P using code that was in Remote.P2P, converted to
use generic protocol runner actions.

This will allow it to be reused in Remote.Git.

This commit was sponsored by mo on Patreon.
2018-03-08 16:11:00 -04:00
Joey Hess
6ddfa9807b
implemented git-annex-shell p2pstdio
Not yet used by git-annex, but this will allow faster transfers etc than
using individual ssh connections and rsync.

Not called git-annex-shell p2p, because git-annex p2p does something
else and I don't want two subcommands with the same name between the two
for sanity reasons.

This commit was sponsored by Øyvind Andersen Holm.
2018-03-07 15:38:01 -04:00
Joey Hess
6063b3df3f
Dial back optimisation when building on arm
Prevent ghc and llc from running out of memory when optimising some
files.

Sean Whitton reported that doing this only in Test.hs was insufficient,
the build still OOMed by the time it got to Test.hs. He had earlier found
the build worked when these options are applied globally.

See https://ghc.haskell.org/trac/ghc/ticket/14821 for why it needs -O1;
once that's fixed it may suffice to use "GHC-Options: -O2 -optlo-O2",
although it may also be that the -O1 prevents ghc from using/leaking
as much memory.

os(arm) should match armel, armhf, armeb, and arm.
It probably also matches arm64, somewhat unfortunately since arm64
systems probably tend to have more memory. See list of arches in
https://hackage.haskell.org/package/Cabal-1.22.2.0/docs/src/Distribution-System.html

This commit was sponsored by Henrik Riomar on Patreon.
2018-03-04 19:48:07 -04:00
Joey Hess
8927ef7613
releasing package git-annex version 6.20180227 2018-02-27 12:05:35 -04:00