Merge branch 'master' of ssh://git-annex.branchable.com

This commit is contained in:
Joey Hess 2016-05-05 11:55:24 -04:00
commit bf2c18b9d4
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[[!comment format=mdwn
username="abdo.roig@4afedf09b5d9a0a6a9f44fc16a778e10cc3e89dc"
nickname="abdo.roig"
subject="Problem fixed"
date="2016-05-05T08:32:37Z"
content="""
The reported problem is fixed for me. Thanks a lot!
"""]]

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### Please describe the problem.
I am using annex with a gcrypt encrypted repository but I am not able to sync content to the remote share via Webapp. If I sync via command line everything is working as expected but via Webapp I receive several error messages complaining about tty not available.
As I workaround I changed two things:
1. /usr/local/bin/git-remote-gcrypt: As $GPG_AGENT_INFO was not set I needed to include "--no-tty" on line 377
2. Add a line in ~/.gnupg/gpg.conf with option "no-tty"
As this breaks gpg2 for use on command line I wanted to provide the --no-tty via option **annex.gnupg-options** as mentioned in the manual. Not sure what I am doing wrong but the Webapp does not pick up these options.
```
[annex]
gnupg-options = --no-tty
```
### What steps will reproduce the problem?
Create repository via
```sh
git annex initremote hidrive type=gcrypt gitrepo=rsync.hidrive.strato.com:/users/xxxxxx/hidrive.git chunk=5MiB keyid=XXXXXXXX
```
Launch Webapp
```sh
git annex webapp
```
Copy files to local annex directory
### What version of git-annex are you using? On what operating system?
OSX 10.11.4
gpg (GnuPG) 2.0.30
libgcrypt 1.7.0
Copyright (C) 2015 Free Software Foundation, Inc.
License GPLv3+: GNU GPL version 3 or later <http://gnu.org/licenses/gpl.html>
This is free software: you are free to change and redistribute it.
There is NO WARRANTY, to the extent permitted by law.
Home: ~/.gnupg
Supported algorithms:
Pubkey: RSA, RSA, RSA, ELG, DSA
Cipher: IDEA, 3DES, CAST5, BLOWFISH, AES, AES192, AES256, TWOFISH,
CAMELLIA128, CAMELLIA192, CAMELLIA256
Hash: MD5, SHA1, RIPEMD160, SHA256, SHA384, SHA512, SHA224
Compression: Uncompressed, ZIP, ZLIB, BZIP2
git-annex version: 6.20160418
build flags: Assistant Webapp Pairing Testsuite WebDAV FsEvents XMPP ConcurrentOutput TorrentParser MagicMime Feeds Quvi
key/value backends: SHA256E SHA256 SHA512E SHA512 SHA224E SHA224 SHA384E SHA384 SHA3_256E SHA3_256 SHA3_512E SHA3_512 SHA3_224E SHA3_224 SHA3_384E SHA3_384 SKEIN256E SKEIN256 SKEIN512E SKEIN512 SHA1E SHA1 MD5E MD5 WORM URL
remote types: git gcrypt bup directory rsync web bittorrent webdav tahoe glacier ddar hook external
local repository version: 6
supported repository versions: 5 6
upgrade supported from repository versions: 0 1 2 4 5
### Please provide any additional information below.
[[!format sh """
[2016-05-05 15:04:31.059236] Pusher: Syncing with hidrive
(recording state in git...)
gcrypt: Development version -- Repository format MAY CHANGE
gpg: cannot open `/dev/tty': Device not configured
user error (gpg2 ["--quiet","--trust-model","always","--decrypt"] exited 2)
gpg: cannot open `/dev/tty': Device not configured
user error (gpg2 ["--quiet","--trust-model","always","--decrypt"] exited 2)
"""]]
### Have you had any luck using git-annex before? (Sometimes we get tired of reading bug reports all day and a lil' positive end note does wonders)

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[[!comment format=mdwn
username="annexuser"
subject="comment 2"
date="2016-05-04T19:16:31Z"
content="""
That makes sense! I'm starting the assistant via systemd, so it probably doesn't have access to my environment to get the ssh keys. Thanks!
"""]]

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[[!comment format=mdwn
username="annexuser"
subject="comment 3"
date="2016-05-04T19:15:16Z"
content="""
Thanks. I will try that and see if I can recover the files. Here is the output of git annex info s3:
remote: s3
description: [s3]
uuid: 15ac19e4-223a-4c81-b7f7-797b9b026b86
trust: semitrusted
cost: 250.0
type: S3
creds: stored locally
bucket: s3-15ac19e4-223a-4c81-b7f7-797b9b026b86
endpoint: s3.amazonaws.com
port: 80
storage class: OtherStorageClass \"STANDARD_IA\"
partsize: 1.07 gigabytes
public: no
encryption: encrypted (encryption key stored in git repository)
chunking: none
remote annex keys: 121924
remote annex size: 680.42 gigabytes
"""]]

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[[!comment format=mdwn
username="Horus"
subject="comment 5"
date="2016-05-05T10:00:20Z"
content="""
Ok, that something I can understand.
But still, I think, when using git-annex from the command line the situation of a merge conflict is still extremeley hard to handle. What is the reason against adding from which remote the conflicted data comes from?
"""]]

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[[!comment format=mdwn
username="Horus"
subject="comment 6"
date="2016-05-05T10:01:21Z"
content="""
Normal git also has merge markers that the tell me about which part is from HEAD, which from the branch to merge.
"""]]

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[[!comment format=mdwn
username="simon.parzer@f837bbade0d93f560dc574b04e835b7875c4026f"
nickname="simon.parzer"
subject="comment 6"
date="2016-05-05T11:26:03Z"
content="""
To sort of follow up on this after 3 months, ```git annex info``` displays ```repository mode: direct```
I have given up on git annex in the meantime, it is a nightmare to sync between different operating systems/file systems.
What might be \"wrong\" with my setup is that I have at least two machines that are dual-boot. So I'm using the same folder both in Windows and Linux. I also have an external HD with an annex repository that I plug in to different machines, and it apparently causes problems.
Now I have to write a python script to recover my lost files from the bottomless abyss that is the .git/annex folder.
"""]]

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[[!comment format=mdwn
username="simon.parzer@f837bbade0d93f560dc574b04e835b7875c4026f"
nickname="simon.parzer"
subject="Python script to recover git annex' lost files"
date="2016-05-05T12:01:46Z"
content="""
Maybe someone else needs this at some point :|
Use it at your own risk of course.
#!python3
import os
import re
from shutil import copyfile
targets = {}
for path, dirs, files in os.walk('.'):
for f in files:
fp = os.path.join(path, f)
if fp.endswith('.py'): continue
fp_size = os.stat(fp).st_size
if fp_size < 72 or fp_size > 256: continue
with open(fp, 'r', encoding='latin1') as stream:
l = stream.readline()
hashmatch = re.match('.*SHA256E\-\w+\-\-(\w{16})', l)
if hashmatch:
targets[hashmatch.group(1)] = os.path.abspath(fp)
#print(targets)
target = os.path.abspath('.')
while not os.path.exists('.git/annex/objects'):
os.chdir('..')
for path, dirs, files in os.walk('.git/annex/objects'):
for f in files:
fp = os.path.join(path, f)
fp_size = os.stat(fp).st_size
if fp_size > 512:
hashmatch = re.match('.*SHA256E\-\w+\-\-(\w{16})', fp)
if hashmatch:
hash = hashmatch.group(1)
if hash in targets:
print(fp, '->', targets[hash])
copyfile(fp, targets[hash])
"""]]

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[[!comment format=mdwn
username="lhunath@3b4ff15f4600f3276d1776a490b734fca0f5c245"
nickname="lhunath"
subject="The application cannot be opened because its executable is missing."
date="2016-05-05T04:33:06Z"
content="""
Just downloaded the DMG, copied the .app into /Applications and ran it; does nothing, from terminal:
$ open -W /Applications/git-annex.app
The application cannot be opened because its executable is missing.
$ /Applications/git-annex.app/Contents/MacOS/git-annex-webapp
$
unable to start webapp in repository /Users/lhunath/annex: Not in a git repository.
Launching web browser on file:///var/folders/np/v9byg9092bbf31jw5cydzszm0000gn/T/webapp1622650073984943658.html
$ /Applications/git-annex.app/Contents/MacOS/git-annex version
git-annex version: 6.20160427-gd0036b9
build flags: Assistant Webapp Pairing Testsuite S3(multipartupload)(storageclasses) WebDAV FsEvents XMPP ConcurrentOutput TorrentParser MagicMime Feeds Quvi
key/value backends: SHA256E SHA256 SHA512E SHA512 SHA224E SHA224 SHA384E SHA384 SHA3_256E SHA3_256 SHA3_512E SHA3_512 SHA3_224E SHA3_224 SHA3_384E SHA3_384 SKEIN256E SKEIN256 SKEIN512E SKEIN512 SHA1E SHA1 MD5E MD5 WORM URL
remote types: git gcrypt S3 bup directory rsync web bittorrent webdav tahoe glacier ddar hook external
"""]]