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doc/bugs/immediately_drops_files.mdwn
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### Please describe the problem.
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When I `git annex get` files in a certain directory, they are got, then are dropped.
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When I do the same in a different directory, then the files there remains (as expected).
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`git annex fsck` also fails on these files, but after that the problem persists.
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I'm not really sure where to look to see why this is happening, especially why only on some directories.
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The filesystem (ext4) this is on has several GB free.
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Looking at the (broken) symlinks, they are strange:
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[[!format sh """
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git annex fsck IMG_4230.JPG > /dev/null
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ls -l IMG_4230.JPG
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lrwxrwxrwx 1 walter walter 207 Aug 13 12:14 IMG_4230.JPG -> ../../../.git/annex/objects/86/KF/SHA256E-s4209479--bba2489f526ed1288d23157b2b985bfda99321c52d05d3f4ddb92144b301318e.JPG/SHA256E-s4209479--bba2489f526ed1288d23157b2b985bfda99321c52d05d3f4ddb92144b301318e.JPG
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"""]]
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But then after getting it (and it being dropped somehow), the symlink is different (the number of ..s)
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[[!format sh """
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git annex get IMG_4230.JPG > /dev/null
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ls -l IMG_4230.JPG
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lrwxrwxrwx 1 walter walter 210 Aug 13 12:16 IMG_4230.JPG -> ../../../../.git/annex/objects/86/KF/SHA256E-s4209479--bba2489f526ed1288d23157b2b985bfda99321c52d05d3f4ddb92144b301318e.JPG/SHA256E-s4209479--bba2489f526ed1288d23157b2b985bfda99321c52d05d3f4ddb92144b301318e.JPG
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"""]]
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### What steps will reproduce the problem?
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`git annex get 2013/08/01/IMG_4230.JPG`
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### What version of git-annex are you using? On what operating system?
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git-annex version: 4.20130812-gc590455
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build flags: Assistant Webapp Pairing Testsuite S3 WebDAV Inotify DBus XMPP DNS
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local repository version: 3
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default repository version: 3
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supported repository versions: 3 4
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upgrade supported from repository versions: 0 1 2
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On ubuntu 12.10
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--Walter
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### Please provide any additional information below.
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*output of git annex fsck*
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[[!format sh """
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git annex fsck 2013/08/01/IMG_4230.JPG
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","ls-files","--cached","-z","--","2013/08/01/IMG_4230.JPG"]
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[2013-08-13 12:01:25 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","check-attr","-z","--stdin","annex.backend","annex.numcopies","--"]
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fsck 2013/08/01/IMG_4230.JPG [2013-08-13 12:01:25 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","cat-file","--batch"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","git-annex"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..3afd101dade8be4e1ed7ac48fdf4173274d3ecd7","--oneline","-n1"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..9be78e75db197a26db6aaaffbcddf5057e30d23f","--oneline","-n1"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..2bae49a6e1ce85ad501b0fa85439da7cde8c8597","--oneline","-n1"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..b5858e25b7f7c45564ab463ecf3e74ecd8979609","--oneline","-n1"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..cad75ea77d513a24006ee0b56ff0aad12b7aa805","--oneline","-n1"]
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[2013-08-13 12:01:25 NZST] read: git ["config","--null","--list"]
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ok
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[2013-08-13 12:01:25 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","hash-object","-w","--stdin-paths","--no-filters"]
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[2013-08-13 12:01:25 NZST] feed: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","update-index","-z","--index-info"]
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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(Recording state in git...)
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[2013-08-13 12:01:25 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","write-tree"]
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[2013-08-13 12:01:25 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","commit-tree","78aca82f86ffb91bc841a3978f410e55aa6e0efe","-p","refs/heads/git-annex"]
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[2013-08-13 12:01:25 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","update-ref","refs/heads/git-annex","14908fedbd44917815dd013125b69def1f7f8f7c"]
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"""]]
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*output of git annex get* (output taken from daemon.log, as output from command does not include the dropping part)
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[[!format sh """
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git annex get 2013/08/01/IMG_4230.JPG
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[2013-08-13 12:03:46 NZST] TransferWatcher: transfer starting: Download UUID "e6bb2ef2-b2b5-11e1-bd1b-3fd40e5e767d" 2013/08/01/IMG_4230.JPG Nothing
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[2013-08-13 12:03:46 NZST] TransferWatcher: transfer starting: Download UUID "e6bb2ef2-b2b5-11e1-bd1b-3fd40e5e767d" 2013/08/01/IMG_4230.JPG Nothing
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[2013-08-13 12:03:46 NZST] TransferWatcher: transfer finishing: Transfer {transferDirection = Download, transferUUID = UUID "e6bb2ef2-b2b5-11e1-bd1b-3fd40e5e767d", transferKey = Key {keyName = "bba2489f526ed1288d23157b2b985bfda99321c52d05d3f4ddb92144b301318e.JPG", keyBackendName = "SHA256E", keySize = Just 4209479, keyMtime = Nothing}}
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[2013-08-13 12:03:46 NZST] Watcher: add symlink 01/IMG_4230.JPG
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[2013-08-13 12:03:46 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","hash-object","-t","blob","-w","--stdin","--no-filters"]
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[2013-08-13 12:03:46 NZST] Committer: committing 1 changes
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[2013-08-13 12:03:46 NZST] Committer: Committing changes to git
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[2013-08-13 12:03:46 NZST] feed: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","update-index","-z","--index-info"]
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[2013-08-13 12:03:46 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","commit","--allow-empty-message","--no-edit","-m","","--quiet","--no-verify"]
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[2013-08-13 12:03:46 NZST] Pusher: Synok
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(Recording state in git...)
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(Recording state in git...)
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(Recording state in git...)
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(Recording state in git...)
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(Recording state in git...)
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(Recording state in git...)
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drop 01/IMG_4230.JPG cing with Adata, b(checking cloud...) itbucket
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[2013-08-13 12:03:46 NZST] Committer: dropped 01/IMG_4230.JPG (from here) (copies now 4) : file renamed
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[2013-08-13 12:03:46 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","hash-object","-w","--stdin-paths","--no-filters"]
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[2013-08-13 12:03:46 NZST] feed: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","update-index","-z","--index-info"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","write-tree"]
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[2013-08-13 12:03:47 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","commit-tree","f288bfce8d133cc0ce00b65d48ca726809da34e6","-p","refs/heads/git-annex"]
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[2013-08-13 12:03:47 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","update-ref","refs/heads/git-annex","5a188246bda51207d12adf86c6d87568ca7076d7"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","symbolic-ref","HEAD"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","refs/heads/master"]
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[2013-08-13 12:03:47 NZST] Pusher: pushing to [Remote { name ="Adata" },Remote { name ="bitbucket" }]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","git-annex"]
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[2013-08-13 12:03:47 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","branch","-f","synced/master"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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[2013-08-13 12:03:47 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","bitbucket","git-annex:synced/git-annex","master:synced/master"]
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[2013-08-13 12:03:47 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","Adata","git-annex:synced/git-annex","master:synced/master"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..5a188246bda51207d12adf86c6d87568ca7076d7","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..9be78e75db197a26db6aaaffbcddf5057e30d23f","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..2bae49a6e1ce85ad501b0fa85439da7cde8c8597","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..b5858e25b7f7c45564ab463ecf3e74ecd8979609","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..3afd101dade8be4e1ed7ac48fdf4173274d3ecd7","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..cad75ea77d513a24006ee0b56ff0aad12b7aa805","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","ls-tree","-z","--","refs/heads/git-annex","uuid.log","remote.log","trust.log","group.log","preferred-content.log"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","git-annex"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..5a188246bda51207d12adf86c6d87568ca7076d7","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..9be78e75db197a26db6aaaffbcddf5057e30d23f","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..2bae49a6e1ce85ad501b0fa85439da7cde8c8597","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..b5858e25b7f7c45564ab463ecf3e74ecd8979609","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..3afd101dade8be4e1ed7ac48fdf4173274d3ecd7","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..cad75ea77d513a24006ee0b56ff0aad12b7aa805","--oneline","-n1"]
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[2013-08-13 12:03:47 NZST] Watcher: add symlink 01/IMG_4230.JPG
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[2013-08-13 12:03:47 NZST] chat: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","hash-object","-t","blob","-w","--stdin","--no-filters"]
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To /media/walter/327D522A6727FE79/Pictures
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3afd101..5a18824 git-annex -> synced/git-annex
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","git-annex"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","Adata","git-annex:synced/git-annex","master"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..5a188246bda51207d12adf86c6d87568ca7076d7","--oneline","-n1"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..9be78e75db197a26db6aaaffbcddf5057e30d23f","--oneline","-n1"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..2bae49a6e1ce85ad501b0fa85439da7cde8c8597","--oneline","-n1"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..b5858e25b7f7c45564ab463ecf3e74ecd8979609","--oneline","-n1"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..cad75ea77d513a24006ee0b56ff0aad12b7aa805","--oneline","-n1"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..3afd101dade8be4e1ed7ac48fdf4173274d3ecd7","--oneline","-n1"]
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[2013-08-13 12:03:48 NZST] Committer: committing 1 changes
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[2013-08-13 12:03:48 NZST] Committer: Committing changes to git
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[2013-08-13 12:03:48 NZST] feed: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","update-index","-z","--index-info"]
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[2013-08-13 12:03:48 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","commit","--allow-empty-message","--no-edit","-m","","--quiet","--no-verify"]
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To git@bitbucket.org:waltersom/Pictures.git
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3afd101..5a18824 git-annex -> synced/git-annex
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","git-annex"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","bitbucket","git-annex:synced/git-annex","master"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","--hash","refs/heads/git-annex"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..5a188246bda51207d12adf86c6d87568ca7076d7","--oneline","-n1"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..9be78e75db197a26db6aaaffbcddf5057e30d23f","--oneline","-n1"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..2bae49a6e1ce85ad501b0fa85439da7cde8c8597","--oneline","-n1"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..b5858e25b7f7c45564ab463ecf3e74ecd8979609","--oneline","-n1"]
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[2013-08-13 12:03:52 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","log","refs/heads/git-annex..cad75ea77d513a24006ee0b56ff0aad12b7aa805","--oneline","-n1"]
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[2013-08-13 12:03:58 NZST] Pusher: Syncing with Adata, bitbucket
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[2013-08-13 12:03:58 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","symbolic-ref","HEAD"]
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[2013-08-13 12:03:58 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","show-ref","refs/heads/master"]
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[2013-08-13 12:03:58 NZST] Pusher: pushing to [Remote { name ="Adata" },Remote { name ="bitbucket" }]
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[2013-08-13 12:03:58 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","branch","-f","synced/master"]
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[2013-08-13 12:03:58 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","Adata","git-annex:synced/git-annex","master:synced/master"]
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[2013-08-13 12:03:58 NZST] call: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","bitbucket","git-annex:synced/git-annex","master:synced/master"]
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Everything up-to-date
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[2013-08-13 12:03:58 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","Adata","git-annex:synced/git-annex","master"]
|
||||
Everything up-to-date
|
||||
[2013-08-13 12:04:02 NZST] read: git ["--git-dir=/home/walter/Photos/.git","--work-tree=/home/walter/Photos","push","bitbucket","git-annex:synced/git-annex","master"]
|
||||
|
||||
"""
|
||||
]]
|
Loading…
Reference in a new issue