Merge branch 'master' of ssh://git-annex.branchable.com

This commit is contained in:
Joey Hess 2014-01-17 13:48:20 -04:00
commit 9a5944c414
9 changed files with 2325 additions and 0 deletions

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[[!comment format=mdwn
username="https://www.google.com/accounts/o8/id?id=AItOawk7iPiqWr3BVPLWEDvJhSSvcOqheLEbLNo"
nickname="Dirk"
subject="comment 2"
date="2014-01-16T18:53:36Z"
content="""
Uup, sorry for forgetting this.
This is happening on Mavericks for me.
"""]]

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### Please describe the problem.
After install I dont get any link to start the program even though can start it from terminal.
### What steps will reproduce the problem?
$ sudo apt-get install git-annex
--->After install...
$ git annex assistant
$ git annex webapp
--->Seems like syntax of the command is not correct, I get the help to write the command correctly.
### What version of git-annex are you using? On what operating system?
git-annex version: 3.20120629
Debian Wheezy 64bits XFCE
### Please provide any additional information below.
[[!format sh """
# If you can, paste a complete transcript of the problem occurring here.
# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log
I don't know where is that log
# End of transcript or log.
"""]]

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[[!comment format=mdwn
username="https://www.google.com/accounts/o8/id?id=AItOawkLdR1fuu5aEz3s9VKTBKVMize_SmeNRJM"
nickname="David"
subject="Still crashing (again)"
date="2014-01-16T23:33:15Z"
content="""
Here is the relevant section of the new crash. Looks like the same crash as yesterdays to me.
[[!format sh \"\"\"
Thread 4 Crashed:
0 S 0x000000010cea0b9d nettle_sha256_init + 4
1 S 0x000000010cea7e60 nettle_yarrow256_init + 24
2 H 0x000000010cccf2a3 wrap_nettle_rnd_init + 52
3 H 0x000000010cc53585 _gnutls_rnd_init + 32
4 H 0x000000010cc47dae gnutls_global_init + 262
5 git-annex 0x000000010ab95873 0x10937a000 + 25278579
6 git-annex 0x000000010c01dc08 0x10937a000 + 46808072
\"\"\"]]
"""]]

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[[!comment format=mdwn
username="https://id.koumbit.net/anarcat"
ip="2001:1928:1:9::1"
subject="comment 12"
date="2014-01-16T17:04:42Z"
content="""
Again, I can reproduce with the standalone build, so there's clearly something going on here... Oddly enough, git-annex doesn't appear in top, but I see:
PID USER PR NI VIRT RES SHR S %CPU %MEM TIME+ COMMAND
21064 anarcat 20 0 111m 23m 14m S 83,0 0,3 9:59.91 ld-linux.so.2
20829 anarcat 20 0 133m 38m 15m S 76,4 0,5 8:54.88 ld-linux.so.2
21133 anarcat 20 0 130m 32m 14m S 14,9 0,4 5:00.55 ld-linux.so.2
ld-linux?
"""]]

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[[!comment format=mdwn
username="http://joeyh.name/"
ip="209.250.56.43"
subject="comment 13"
date="2014-01-16T17:07:05Z"
content="""
It's not clear from your comment if you tried my ghc 7.6.3 build.
The hacks used to make the standalone build run everywhere cause ugly process names.
"""]]

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[[!comment format=mdwn
username="https://id.koumbit.net/anarcat"
ip="2001:1928:1:9::1"
subject="comment 14"
date="2014-01-16T17:43:33Z"
content="""
Sorry yes, I tried the 7.6.3 build:
http://tmp.kitenet.net/git-annex-standalone-i386.tar.gz ff3e8a3c35301c8a625747f98435fe427be17f47345540f537ff47f6fc97bdb6
$ ps x -o user,pid,start,time,vsz,c,comm | grep ld
anarcat 20818 11:27:32 00:00:00 6640 0 ld-linux.so.2
anarcat 20829 11:27:32 00:30:23 216608 40 ld-linux.so.2
anarcat 20845 11:27:33 00:00:00 13804 0 ld-linux.so.2
anarcat 20873 11:27:33 00:00:22 13804 0 ld-linux.so.2
anarcat 20934 11:27:45 00:00:40 12060 0 ld-linux.so.2
anarcat 20954 11:27:46 00:00:00 9944 0 ld-linux.so.2
anarcat 20955 11:27:48 00:00:00 9948 0 ld-linux.so.2
anarcat 21064 11:28:09 00:49:42 114204 67 ld-linux.so.2
anarcat 21073 11:28:09 00:00:00 6772 0 ld-linux.so.2
anarcat 21099 11:28:12 00:00:00 6684 0 ld-linux.so.2
anarcat 21101 11:28:12 00:00:00 6780 0 ld-linux.so.2
anarcat 21133 11:28:20 00:45:39 128544 62 ld-linux.so.2
anarcat 21146 11:28:20 00:00:03 11172 0 ld-linux.so.2
anarcat 21200 11:28:26 00:00:01 7704 0 ld-linux.so.2
anarcat 21204 11:28:28 00:00:00 7308 0 ld-linux.so.2
$ /home/anarcat/Downloads/git-annex.linux/git-annex version
git-annex version: 5.20140115-g7a86704
build flags: Assistant Webapp Pairing Testsuite S3 WebDAV Inotify DBus XMPP Feeds Quvi TDFA CryptoHash
key/value backends: SHA256E SHA1E SHA512E SHA224E SHA384E SKEIN256E SKEIN512E SHA256 SHA1 SHA512 SHA224 SHA384 SKEIN256 SKEIN512 WORM URL
remote types: git gcrypt S3 bup directory rsync web webdav tahoe glacier hook external
local repository version: unknown
supported repository version: 5
upgrade supported from repository versions: 0 1 2 4
"""]]

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[[!comment format=mdwn
username="stp"
ip="188.193.209.7"
subject="Probably confirming this bug"
date="2014-01-16T19:59:56Z"
content="""
I am trying around with the assistant and webapp for a few months now.
I have rather large git annex repos and even switched from direct ones to indirect repos to increase performance.
The issue I'm seeing is that when using the assistant or webapp it does the initial startupscan, but only consumes 99-100% of one of my cores and doesn't use significant io. It's stuck in this state for hours (12+) or even days. The only thing standing out in the logs is that it puts a lot of files into the queue. (I suspected a not yet synced backup remote to be the issue) I stopped syncing with it, but that didn't speed up the startupScan at all.
[2014-01-16 19:34:26 CET] TransferScanner: queued Upload NoUUID db/2012-07/1406469990005618750.meta Nothing : expensive scan found missing object
[2014-01-16 19:34:27 CET] TransferScanner: queued Upload NoUUID db/2012-07/1406471293790598760.eml.gz Nothing : expensive scan found missing object
Some additional information:
Total file count: ~100000
Total size: ~500mb
SSD + i7 Quadcore running Ubuntu 13.10
Latest build from 2014-01-16 as standalone built.
Running git annex add && git annex sync from the cli returns within seconds 0.1s (no new files) and 10s (500-1000 new files).
Not understanding the main difference git annex add and git annex assistant (startupScan function) really have.
Thanks for your help.
"""]]

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[[!comment format=sh
username="https://www.google.com/accounts/o8/id?id=AItOawll4Kgp7nMuOKdB0FfbcYZ3KRq7HCS0Slc"
nickname="Laura"
subject="Rebase all branches"
date="2014-01-16T17:47:45Z"
content="""
For the portion: git rebase master mybranch # how to automate this for all branches?
Try this:
branch_to_ignore='git-annex|master|newroot'
for branch in $(git for-each-ref --sort=-committerdate refs/heads --format='%(refname:short)' | egrep -v $branch_to_ignore )
do git rebase --onto master \"$branch~\" \"$branch\"
echo \"Rebasing branch $branch onto master....\"
done
Feel free to add/correct as necessary
"""]]