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doc/bugs/git_annex_wont_work_with_git-dir_and_work-tree.mdwn
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### Please describe the problem.
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If using git annex with external .git dir webapp report a tread crashed and ever trying to restart it crash again and webapp is not able to upload/download/sync (also the download of git-annex updates is affected)
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### What steps will reproduce the problem?
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### What version of git-annex are you using? On what operating system?
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git-annex version: 5.20150113-gcf247cf
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build flags: Assistant Webapp Webapp-secure Pairing Testsuite S3 WebDAV Inotify DBus DesktopNotify XMPP DNS Feeds Quvi TDFA CryptoHash
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key/value backends: SHA256E SHA1E SHA512E SHA224E SHA384E SKEIN256E SKEIN512E SHA256 SHA1 SHA512 SHA224 SHA384 SKEIN256 SKEIN512 WORM URL
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remote types: git gcrypt S3 bup directory rsync web bittorrent webdav tahoe glacier ddar hook external
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Precompiled tarball from official git-annex download site
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Gentoo linux
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### Please provide any additional information below.
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[[!format sh """
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Launching web browser on file://../.git_annex_repos/pippo.git/annex/webapp.html <-- note wrong path! should be /home/gioacchino/.git_annex_repos/pippo.git/annex/webapp.html
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RemoteControl crashed: user error (nice ["ionice","-c3","/home/gioacchino/opt/git-annex.linux/git-annex","remotedaemon"] exited 1)
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WebApp crashed: <file descriptor: 11>: hPutStr: illegal operation (handle is closed
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"""]]
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