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[[!comment format=mdwn
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username="joey"
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subject="""comment 4"""
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date="2020-10-12T19:04:49Z"
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content="""
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This is not the kind of problem that `git-annex repair` can fix.
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The problems it fixes are all where one clone of a repo has gotten some
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object files corrupted by eg disk problems, but other clones still have
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good copies of those object files.
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The reason `git-annex repair` reports it failed is because it sees that
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`git fsck` is reporting a problem and the things it's tried to do didn't
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fix it.
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Are the "missing files" missing in that their annexed content is not
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present, or missing in that there is no annex symlink at all? In the former
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case, you need `git annex fsck` on those files, or `git-annex get`. In the
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latter case, if `git status` doesn't show a missing file as deleted, that
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would be a very strange problem with git.
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"""]]
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