Added a comment: Solution
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[[!comment format=mdwn
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username="johannes@12f1850a57e13cc234b5ebf88a5d3ac68915a6c2"
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nickname="johannes"
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avatar="http://cdn.libravatar.org/avatar/7acaf4a71b0b93cc419195f58f4cd54c"
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subject="Solution"
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date="2017-01-06T12:19:46Z"
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content="""
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After the update to 20161231, I tried again. Unfortunately, I am still getting the same error.
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However, I noticed that removing the file for which I get the \"is outside repository\" error actually fixes the problem. Once I dropped the file from the annex as well, I was able to re-add the file without triggering this error again.
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Please consider this issues as fixed.
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"""]]
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