Added a comment
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[[!comment format=mdwn
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username="http://joeyh.name/"
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ip="209.250.56.87"
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subject="comment 1"
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date="2013-12-12T17:11:59Z"
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content="""
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It sounds like the contents of the files are being successfully transferred.
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It may be that you're using an old and buggy version of git-annex, in which the direct mode code lost track of things and so failed to update the tree correctly when receiving the content of a file. If so, you could fix it by upgrading git-annex and running `git annex fsck`.
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"""]]
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