From 37f1deb722ef9585de75f2a88299dee182f0bef3 Mon Sep 17 00:00:00 2001 From: yarikoptic Date: Mon, 16 Apr 2018 05:53:01 +0000 Subject: [PATCH] Added a comment: old issue bites back --- ..._4412fe19280551109bed2fde7a921079._comment | 47 +++++++++++++++++++ 1 file changed, 47 insertions(+) create mode 100644 doc/bugs/fatal__58___git-write-tree__58___error_building_trees/comment_2_4412fe19280551109bed2fde7a921079._comment diff --git a/doc/bugs/fatal__58___git-write-tree__58___error_building_trees/comment_2_4412fe19280551109bed2fde7a921079._comment b/doc/bugs/fatal__58___git-write-tree__58___error_building_trees/comment_2_4412fe19280551109bed2fde7a921079._comment new file mode 100644 index 0000000000..ba0aec5c83 --- /dev/null +++ b/doc/bugs/fatal__58___git-write-tree__58___error_building_trees/comment_2_4412fe19280551109bed2fde7a921079._comment @@ -0,0 +1,47 @@ +[[!comment format=mdwn + username="yarikoptic" + avatar="http://cdn.libravatar.org/avatar/f11e9c84cb18d26a1748c33b48c924b4" + subject="old issue bites back" + date="2018-04-16T05:53:00Z" + content=""" +Sorry to bring the old issue up but we just ran into the same situation, and I wonder if any idea on how to mediate -- unlike other cases where it happens due to corrupt index, here I guess it goes about \"git-annex\" branch (or its some kind of local index cache?) + +[[!format sh \"\"\" +nastase@head1:~/attention/raw_bids/stimuli$ git add README.md +nastase@head1:~/attention/raw_bids/stimuli$ git commit -m 'README for stimuli' README.md +(recording state in git...) +error: invalid object 100644 fd601b9139518bd6737ad20e55198dd1854fa0f9 for '001/92f/MD5E-s1413--241f0946a6aecfe12a7c031cb2339f9d.pklz.log' +fatal: git-write-tree: error building trees +git-annex: failed to read sha from git write-tree +CallStack (from HasCallStack): + error, called at ./Git/Sha.hs:18:15 in main:Git.Sha + +nastase@head1:~/attention/raw_bids/stimuli$ git annex fsck +curl: (22) The requested URL returned error: 404 Not Found + + Remote openfmri not usable by git-annex; setting annex-ignore +fsck bird_eating_1.mp4 (checksum...) ok +... +fsck ungulate_swimming_2.mp4 (checksum...) ok +(recording state in git...) +error: invalid object 100644 fd601b9139518bd6737ad20e55198dd1854fa0f9 for '001/92f/MD5E-s1413--241f0946a6aecfe12a7c031cb2339f9d.pklz.log' +fatal: git-write-tree: error building trees +git-annex: failed to read sha from git write-tree +CallStack (from HasCallStack): + error, called at ./Git/Sha.hs:18:15 in main:Git.Sha + +nastase@head1:~/attention/raw_bids/stimuli$ git --version +git version 2.13.0.rc1.294.g07d810a77f + +nastase@head1:~/attention/raw_bids/stimuli$ git annex version +git-annex version: 6.20180329+gitga5fe62bed-1~ndall+1 + +\"\"\"]] + +NB The issue came earlier and I have just upgraded git from elderly 2.7.0 and git-annex-standalone from a few months back. + +Any advice would be welcome + +[[!meta author=yoh]] + +"""]]