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# What steps will reproduce the problem?
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git add file
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git annex add file2
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git annex direct
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git annex indirect
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file and file2 are now both in the annex.
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# What is the expected output? What do you see instead?
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file should remain in the main repo, file2 should remain in the annex
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# What version of git-annex are you using? On what operating system?
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git-annex version: 4.20130228
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local repository version: 3
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default repository version: 3
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supported repository versions: 3 4
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upgrade supported from repository versions: 0 1 2
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git version 1.8.1.5
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Mac OSX 10.8.2 Build 12C60
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