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### Please describe the problem.
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git annex status returns:
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annexed files in working tree: fatal: git ls-files: cannot generate relative filenames containing '..'
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There are unlocked files mixed with locked (symlinked) throughout the repository after a commit.
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Perhaps my repo is in an inconsistent state?
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### What steps will reproduce the problem?
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Run git annex status
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### What version of git-annex are you using? On what operating system?
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git-annex version: 4.20131106. Redhat EL6 running on KVM.
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### Please provide any additional information below.
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[[!format sh """
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# If you can, paste a complete transcript of the problem occurring here.
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# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log
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[username@box pnt]$ git annex status
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repository mode: indirect
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trusted repositories: 0
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semitrusted repositories: 2
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00000000-0000-0000-0000-000000000001 -- web
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1ff41d2d-02bd-4795-88b9-bf3fbbeabef7 -- here
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untrusted repositories: 0
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transfers in progress: none
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available local disk space: 36.86 terabytes (+1 megabyte reserved)
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local annex keys: 35750
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local annex size: 251.11 gigabytes
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annexed files in working tree: fatal: git ls-files: cannot generate relative filenames containing '..'
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0
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size of annexed files in working tree: 0 bytes
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bloom filter size: 16 mebibytes (7.2% full)
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backend usage:
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SHA256: 18471
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SHA256E: 17279
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[username@box pnt]$ git annex version
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git-annex version: 4.20131106
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build flags: Assistant Webapp Pairing Testsuite S3 WebDAV Inotify DBus XMPP DNS Feeds Quvi TDFA CryptoHash
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key/value backends: SHA256E SHA1E SHA512E SHA224E SHA384E SKEIN256E SKEIN512E SHA256 SHA1 SHA512 SHA224 SHA384 SKEIN256 SKEIN512 WORM URL
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remote types: git gcrypt S3 bup directory rsync web webdav glacier hook
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local repository version: 3
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default repository version: 3
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supported repository versions: 3 4
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upgrade supported from repository versions: 0 1 2
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# End of transcript or log.
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"""]]
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