### Please provide any additional information below.
Clones of my repositories lost all track of other repositories they only seem to know about them selfs attempting to remove other repositories (git annex dead name-of-an-existing-repo) fails, telling me that the repository with the name is not found.
[[!format sh """
# If you can, paste a complete transcript of the problem occurring here.
# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log