### Please describe the problem.
In a git annex assistant managed repo, Calibre's delete book action causes the file to be committed to git instead of annexed.

### What steps will reproduce the problem?
I have put my entire calibre library into a git annex. I use the assistant in adjusted mode so that all files can be unlocked and calibre is free to do what it wants with the filesystem. I use btrfs to save storage space (but I don't think that part matters).

If I have a book in the Calibre library and then I delete it, Calibre uses some method to move the files to a directory called .caltrash (so that the book can be recovered later). When it does that, git annex does a git add instead of a git annex add. This makes me sad.

I have no .gitignore file.

### What version of git-annex are you using? On what operating system?
```
xentac@baxter:~/calibre$ git annex version
git-annex version: 10.20240430-1~ndall+1
build flags: Assistant Webapp Pairing Inotify DBus DesktopNotify TorrentParser MagicMime Benchmark Feeds Testsuite S3 WebDAV
dependency versions: aws-0.22.1 bloomfilter-2.0.1.0 cryptonite-0.29 DAV-1.3.4 feed-1.3.2.1 ghc-9.0.2 http-client-0.7.13.1 persistent-sqlite-2.13.1.0 torrent-10000.1.1 uuid-1.3.15 yesod-1.6.2.1
key/value backends: SHA256E SHA256 SHA512E SHA512 SHA224E SHA224 SHA384E SHA384 SHA3_256E SHA3_256 SHA3_512E SHA3_512 SHA3_224E SHA3_224 SHA3_384E SHA3_384 SKEIN256E SKEIN256 SKEIN512E SKEIN512 BLAKE2B256E BLAKE2B256 BLAKE2B512E BLAKE2B512 BLAKE2B160E BLAKE2B160 BLAKE2B224E BLAKE2B224 BLAKE2B384E BLAKE2B384 BLAKE2BP512E BLAKE2BP512 BLAKE2S256E BLAKE2S256 BLAKE2S160E BLAKE2S160 BLAKE2S224E BLAKE2S224 BLAKE2SP256E BLAKE2SP256 BLAKE2SP224E BLAKE2SP224 SHA1E SHA1 MD5E MD5 WORM URL VURL X*
remote types: git gcrypt p2p S3 bup directory rsync web bittorrent webdav adb tahoe glacier ddar git-lfs httpalso borg rclone hook external
operating system: linux x86_64
supported repository versions: 8 9 10
upgrade supported from repository versions: 0 1 2 3 4 5 6 7 8 9 10
local repository version: 10
```

```
xentac@baxter:~/calibre$ cat /etc/issue
Ubuntu 24.04 LTS \n \l
```

### Please provide any additional information below.

[[!format sh """
# If you can, paste a complete transcript of the problem occurring here.
# If the problem is with the git-annex assistant, paste in .git/annex/daemon.log


# End of transcript or log.
"""]]

### Have you had any luck using git-annex before? (Sometimes we get tired of reading bug reports all day and a lil' positive end note does wonders)


